FFCP PHASE1:Hg19::chr15:48712928..48712948,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:48712928..48712948,- | |||
|coexpression_cluster_id=C834 | |coexpression_cluster_id=C834 | ||
|description=CAGE_peak_at_chr15:48712928..48712948,- | |description=CAGE_peak_at_chr15:48712928..48712948,- | ||
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|ontology_enrichment_celltype=CL:0000055!3.63e-29!180;CL:0000057!1.91e-22!75;CL:0000048!1.92e-14!430;CL:0000723!1.30e-13!436;CL:0000034!1.49e-12!444;CL:0000680!2.15e-11!57;CL:0000056!2.15e-11!57;CL:0000355!2.15e-11!57;CL:0002334!2.62e-11!12;CL:0000187!1.06e-10!54;CL:0002620!2.74e-10!23;CL:0000192!1.93e-09!42;CL:0000514!1.93e-09!42;CL:0000183!6.86e-09!59;CL:0002371!7.51e-09!591;CL:0000393!1.43e-08!60;CL:0000211!1.43e-08!60;CL:0000153!3.50e-08!9;CL:0000447!3.50e-08!9;CL:0002320!4.21e-07!365;CL:0000499!4.78e-07!27;CL:0000134!7.97e-07!358 | |ontology_enrichment_celltype=CL:0000055!3.63e-29!180;CL:0000057!1.91e-22!75;CL:0000048!1.92e-14!430;CL:0000723!1.30e-13!436;CL:0000034!1.49e-12!444;CL:0000680!2.15e-11!57;CL:0000056!2.15e-11!57;CL:0000355!2.15e-11!57;CL:0002334!2.62e-11!12;CL:0000187!1.06e-10!54;CL:0002620!2.74e-10!23;CL:0000192!1.93e-09!42;CL:0000514!1.93e-09!42;CL:0000183!6.86e-09!59;CL:0002371!7.51e-09!591;CL:0000393!1.43e-08!60;CL:0000211!1.43e-08!60;CL:0000153!3.50e-08!9;CL:0000447!3.50e-08!9;CL:0002320!4.21e-07!365;CL:0000499!4.78e-07!27;CL:0000134!7.97e-07!358 | ||
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|ontology_enrichment_celltype_v019_2=CL:0000057,3.37e-22,76;CL:0002334,7.59e-15,12;CL:0000153,1.73e-11,9;CL:0000447,1.73e-11,9;CL:0002620,1.22e-10,23;CL:0000048,1.60e-10,427;CL:0000134,2.77e-10,354;CL:0000723,3.48e-10,433;CL:0002580,5.77e-10,3;CL:0002320,7.63e-10,361;CL:0000034,9.49e-10,441;CL:0000219,1.55e-09,386;CL:0002615,2.41e-09,3;CL:0000135,4.50e-09,3;CL:0000388,4.50e-09,3;CL:0000327,9.94e-09,15;CL:0000499,2.13e-08,28;CL:0000058,7.00e-08,6;CL:0000138,7.00e-08,6;CL:1000306,5.03e-07,4;CL:0002547,5.03e-07,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;5.99e-10;5!DOID:450;5.99e-10;5!DOID:66;5.99e-10;5!DOID:423;5.99e-10;5!DOID:0080000;5.99e-10;5!DOID:11722;5.99e-10;5 | |ontology_enrichment_disease_v019=DOID:17;5.99e-10;5!DOID:450;5.99e-10;5!DOID:66;5.99e-10;5!DOID:423;5.99e-10;5!DOID:0080000;5.99e-10;5!DOID:11722;5.99e-10;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,6.50e-10,5;DOID:450,6.50e-10,5;DOID:66,6.50e-10,5;DOID:423,6.50e-10,5;DOID:0080000,6.50e-10,5;DOID:11722,6.50e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0002385!2.50e-11!63;UBERON:0001015!2.50e-11!63;UBERON:0000383!2.50e-11!63;UBERON:0001134!9.18e-11!61;UBERON:0002036!9.18e-11!61;UBERON:0003082!9.18e-11!61;UBERON:0004290!5.64e-10!70;UBERON:0000914!4.60e-09!83;UBERON:0002329!4.60e-09!83;UBERON:0003077!4.60e-09!83;UBERON:0003059!4.60e-09!83;UBERON:0007282!4.60e-09!83;UBERON:0009618!4.60e-09!83;UBERON:0007285!4.60e-09!83;UBERON:0000486!8.26e-09!82;UBERON:0002199!6.21e-08!45;UBERON:0002416!6.21e-08!45;UBERON:0004872!2.73e-07!84;UBERON:0002097!4.23e-07!40;UBERON:0003688!5.55e-07!6;UBERON:0002358!5.55e-07!6;UBERON:0003684!5.55e-07!6;UBERON:0001178!5.55e-07!6;UBERON:0002384!7.01e-07!375 | |ontology_enrichment_uberon=UBERON:0002385!2.50e-11!63;UBERON:0001015!2.50e-11!63;UBERON:0000383!2.50e-11!63;UBERON:0001134!9.18e-11!61;UBERON:0002036!9.18e-11!61;UBERON:0003082!9.18e-11!61;UBERON:0004290!5.64e-10!70;UBERON:0000914!4.60e-09!83;UBERON:0002329!4.60e-09!83;UBERON:0003077!4.60e-09!83;UBERON:0003059!4.60e-09!83;UBERON:0007282!4.60e-09!83;UBERON:0009618!4.60e-09!83;UBERON:0007285!4.60e-09!83;UBERON:0000486!8.26e-09!82;UBERON:0002199!6.21e-08!45;UBERON:0002416!6.21e-08!45;UBERON:0004872!2.73e-07!84;UBERON:0002097!4.23e-07!40;UBERON:0003688!5.55e-07!6;UBERON:0002358!5.55e-07!6;UBERON:0003684!5.55e-07!6;UBERON:0001178!5.55e-07!6;UBERON:0002384!7.01e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.73e-16;9!UBERON:0000042;4.73e-16;9!UBERON:0003688;1.42e-12;6!UBERON:0002358;1.42e-12;6!UBERON:0003684;1.42e-12;6!UBERON:0001178;1.42e-12;6!UBERON:0007846;8.12e-09;3!UBERON:0000043;8.12e-09;3!UBERON:0007845;8.12e-09;3!UBERON:0002199;3.79e-07;46!UBERON:0002416;3.79e-07;46!UBERON:0004797;3.84e-07;4!UBERON:0000415;3.84e-07;4!UBERON:0007240;3.84e-07;4!UBERON:0005742;3.84e-07;4!UBERON:0005734;3.84e-07;4!UBERON:0004664;3.84e-07;4!UBERON:0004663;3.84e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0004457;4.73e-16;9!UBERON:0000042;4.73e-16;9!UBERON:0003688;1.42e-12;6!UBERON:0002358;1.42e-12;6!UBERON:0003684;1.42e-12;6!UBERON:0001178;1.42e-12;6!UBERON:0007846;8.12e-09;3!UBERON:0000043;8.12e-09;3!UBERON:0007845;8.12e-09;3!UBERON:0002199;3.79e-07;46!UBERON:0002416;3.79e-07;46!UBERON:0004797;3.84e-07;4!UBERON:0000415;3.84e-07;4!UBERON:0007240;3.84e-07;4!UBERON:0005742;3.84e-07;4!UBERON:0005734;3.84e-07;4!UBERON:0004664;3.84e-07;4!UBERON:0004663;3.84e-07;4 | ||
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|phase1_expression=0.54503513781167,2.99740733447376,1.26858963686374,2.00146596706261,2.23480547213644,1.74467704820074,0,0,0.783556884599516,0,0,0.218441372130172,0.791300934685361,0,0.331397375727916,0,1.20538905604795,0.730310090387373,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.44575660953827,1.50401373190767,3.62116297402059,0.795285947051099,1.45990461090791,0.189069634328136,0.443458794925128,0.702678285545008,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,1.51956613997496,0.397227542439656,6.3104056564739,1.06400514659507,0.560677600142307,1.06748995729705,1.48000529050296,0.311211035399766,0.67355336034844,0.326923806226917,0.151357427644931,0.576175924479999,0,0,0,0.597794722207204,0,0,0.140450806702248,0,0.368502951935304,0.206651562351531,0,1.48360157567134,0,0,0,0,0,0,0.30648779579902,0.600952235626387,0.453728732640084,2.69084453533293,4.05759038755278,1.27159140695737,2.40072876867522,0.515262646192195,1.54584324027377,1.11670113798954,1.35021065793013,0.68205903612839,3.02920529092937,0.828449087780694,1.45481451136931,2.13005755509969,0.806016785821122,0.339121184620975,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,1.39310378409594,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.587043471179108,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,1.71072446022705,0,0,0.285826432630578,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0.57191197463259,3.7983512377401,0,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0.718874566474748,0,0,1.30303176000821,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0,0.207970861530807,1.24900292158013,0.788512075169673,0.937131319941706,0.300946099727719,0,0,0,0.553107505625109,0.521301686808497,0,0,0,0,0,0,0,0.907170879989041,2.23297027036899,1.99500565274481,3.92924132206303,0.768834895534206,2.04682899626681,4.02134802859019,1.48418066444991,0.771048469013278,1.42049380250502,0.246381468041427,2.07701771673448,0.464841513839837,0,0,0,0.34444334449382,0.728364672026868,0.786746489756545,0,0,0,1.46139224653261,0.422206515571503,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.0915694648183434,0,0,0,0,0.386682873168488,0.154048617114644,0.307007349452259,0,0.214840489736547,0.145016693914229,0.340906509664404,0.534192213880424,0,0,0,0,0.464845549297286,4.40737285562896,1.3940745403212,0.616067160352178,0.532306030317022,0,0.18532421910392,0,0.372158369359667,0.949138274156178,0.190630193923825,0,0.855877976067841,1.27281299170375,0,0.359744915166629,1.09814811894422,0.235624804691373,0.404364963146632,0,0.421258456238981,0,0.974853958525138,0,0.272999822815972,0.424216295861138,0,0.551365343546124,0.66343897524122,0,0.578775534266688,1.31178950409327,0.405820753925408,0,0.563391205064483,0.143411352204052,0.0982490410131212,0,0.709522128141196,4.01104507065562,4.93942339439853,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0.296964680832639,0,0,0,0.111308705022906,0.329607748453519,0,0.19924798825107,0,0,0,0,1.86623752597084,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0.683652335082007,0,0,0,4.78501739597879,0.0915975934018623,5.86338253620498,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0.0821154570532092,0.193978032976839,0.0882561266915003,0.225980740780532,0.137041924646751,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0.134366944973453,1.44119953416961,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0.653174720218818,0,0.082092520749339,0.681552087141687,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,1.64180283175561,0.233713309847224,2.21922344601045,0,1.25783950876288,1.77962244319307,0.228840068396924,0.302461847526478,0.621748802331122,0.147855149989634,0.159296767163702,0,0.931577741257556,2.07353103920428,0.797525143673985,0,0.300515217994437,0.761610424337591,0.813741466409323,0.909243296012797,0.214821114084977,0,0.398095888698616,1.20008329398946,2.06037423109676,0.336749488765919,1.26184898228651,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0.2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|short_description=p@chr15:48712928..48712948,- | |short_description=p@chr15:48712928..48712948,- | ||
}} | }} |
Latest revision as of 02:09, 25 July 2015
Short description: | p@chr15:48712928..48712948, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:48712928..48712948, - |
Coexpression cluster: | C834_Fibroblast_Sertoli_chorionic_Smooth_Synoviocyte_Preadipocyte_normal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.37e-22 | 76 |
preadipocyte | 7.59e-15 | 12 |
GAG secreting cell | 1.73e-11 | 9 |
carbohydrate secreting cell | 1.73e-11 | 9 |
skin fibroblast | 1.22e-10 | 23 |
multi fate stem cell | 1.60e-10 | 427 |
mesenchymal cell | 2.77e-10 | 354 |
somatic stem cell | 3.48e-10 | 433 |
preadipocyte of the breast | 5.77e-10 | 3 |
connective tissue cell | 7.63e-10 | 361 |
stem cell | 9.49e-10 | 441 |
motile cell | 1.55e-09 | 386 |
adipocyte of omentum tissue | 2.41e-09 | 3 |
fibrocyte | 4.50e-09 | 3 |
tendon cell | 4.50e-09 | 3 |
extracellular matrix secreting cell | 9.94e-09 | 15 |
stromal cell | 2.13e-08 | 28 |
chondroblast | 7.00e-08 | 6 |
chondrocyte | 7.00e-08 | 6 |
fibroblast of tunica adventitia of artery | 5.03e-07 | 4 |
fibroblast of the aortic adventitia | 5.03e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.35e-12 | 6 |
peritoneum | 2.35e-12 | 6 |
abdominal cavity | 2.35e-12 | 6 |
visceral peritoneum | 2.35e-12 | 6 |
cavity lining | 1.37e-11 | 12 |
serous membrane | 1.37e-11 | 12 |
connective tissue | 6.10e-10 | 371 |
dense regular connective tissue | 4.50e-09 | 3 |
tendon | 4.50e-09 | 3 |
regular connective tissue | 4.50e-09 | 3 |
integument | 7.17e-09 | 46 |
integumental system | 7.17e-09 | 46 |
skin of body | 7.71e-09 | 41 |
organ component layer | 1.59e-07 | 66 |
artery wall | 5.03e-07 | 4 |
tunica adventitia of artery | 5.03e-07 | 4 |
adventitia | 5.03e-07 | 4 |
tunica adventitia of blood vessel | 5.03e-07 | 4 |
aorta tunica adventitia | 5.03e-07 | 4 |
aorta wall | 5.03e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.50e-10 | 5 |
myotonic disease | 6.50e-10 | 5 |
muscle tissue disease | 6.50e-10 | 5 |
myopathy | 6.50e-10 | 5 |
muscular disease | 6.50e-10 | 5 |
myotonic dystrophy | 6.50e-10 | 5 |