FFCP PHASE1:Hg19::chr11:118209514..118209525,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:118209514..118209525,+ | |||
|coexpression_cluster_id=C28 | |coexpression_cluster_id=C28 | ||
|description=CAGE_peak_at_chr11:118209514..118209525,+ | |description=CAGE_peak_at_chr11:118209514..118209525,+ | ||
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|ontology_enrichment_celltype=CL:0000791!2.73e-43!18;CL:0000789!2.73e-43!18;CL:0002420!2.73e-43!18;CL:0002419!2.73e-43!18;CL:0000790!2.73e-43!18;CL:0000084!3.17e-40!25;CL:0000827!3.17e-40!25;CL:0000624!5.47e-29!6;CL:0000838!5.62e-26!52;CL:0000542!2.09e-25!53;CL:0000051!2.09e-25!53;CL:0000625!4.42e-21!11;CL:0000623!2.81e-15!3;CL:0000825!2.81e-15!3;CL:0000898!3.57e-15!3;CL:0002087!3.26e-14!119;CL:0000738!4.95e-14!140;CL:0002031!8.75e-11!124;CL:0000037!1.97e-10!172;CL:0000566!1.97e-10!172;CL:0000815!2.08e-10!2;CL:0000792!2.08e-10!2;CL:0002677!2.08e-10!2;CL:0000988!1.43e-09!182;CL:0002032!5.77e-08!165;CL:0000837!5.77e-08!165;CL:0000842!5.38e-07!3 | |ontology_enrichment_celltype=CL:0000791!2.73e-43!18;CL:0000789!2.73e-43!18;CL:0002420!2.73e-43!18;CL:0002419!2.73e-43!18;CL:0000790!2.73e-43!18;CL:0000084!3.17e-40!25;CL:0000827!3.17e-40!25;CL:0000624!5.47e-29!6;CL:0000838!5.62e-26!52;CL:0000542!2.09e-25!53;CL:0000051!2.09e-25!53;CL:0000625!4.42e-21!11;CL:0000623!2.81e-15!3;CL:0000825!2.81e-15!3;CL:0000898!3.57e-15!3;CL:0002087!3.26e-14!119;CL:0000738!4.95e-14!140;CL:0002031!8.75e-11!124;CL:0000037!1.97e-10!172;CL:0000566!1.97e-10!172;CL:0000815!2.08e-10!2;CL:0000792!2.08e-10!2;CL:0002677!2.08e-10!2;CL:0000988!1.43e-09!182;CL:0002032!5.77e-08!165;CL:0000837!5.77e-08!165;CL:0000842!5.38e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000895;3.34e-66;1!CL:0000898;3.66e-23;3!CL:0000791;9.75e-16;18!CL:0000789;9.75e-16;18!CL:0002419;9.75e-16;18!CL:0000624;2.59e-12;6!CL:0000084;1.15e-11;25!CL:0000542;5.80e-08;53!CL:0000625;2.55e-07;11 | |ontology_enrichment_celltype_v019=CL:0000895;3.34e-66;1!CL:0000898;3.66e-23;3!CL:0000791;9.75e-16;18!CL:0000789;9.75e-16;18!CL:0002419;9.75e-16;18!CL:0000624;2.59e-12;6!CL:0000084;1.15e-11;25!CL:0000542;5.80e-08;53!CL:0000625;2.55e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000810,4.66e-66,1;CL:0000895,4.66e-66,1;CL:0002436,4.66e-66,1;CL:0002427,4.66e-66,1;CL:0002428,4.66e-66,1;CL:0002429,4.66e-66,1;CL:0002433,4.66e-66,1;CL:0002431,4.66e-66,1;CL:0002432,4.66e-66,1;CL:0000893,7.05e-34,2;CL:0002489,7.05e-34,2;CL:0000809,7.05e-34,2;CL:0000808,7.05e-34,2;CL:0000894,7.05e-34,2;CL:0000806,7.05e-34,2;CL:0000807,7.05e-34,2;CL:0000805,7.05e-34,2;CL:0002425,7.05e-34,2;CL:0000898,4.09e-23,3;CL:0000791,9.75e-16,18;CL:0000789,9.75e-16,18;CL:0002420,9.75e-16,18;CL:0002419,9.75e-16,18;CL:0000790,9.75e-16,18;CL:0000624,2.74e-12,6;CL:0000084,1.15e-11,25;CL:0000827,1.15e-11,25;CL:0000625,2.47e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002427;3.34e-66;1!CL:0002425;5.96e-34;2!CL:0000790;9.75e-16;18!CL:0000051;5.80e-08;53 | |ontology_enrichment_development_v019=CL:0002427;3.34e-66;1!CL:0002425;5.96e-34;2!CL:0000790;9.75e-16;18!CL:0000051;5.80e-08;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!5.29e-12!4;UBERON:0005058!5.29e-12!4;UBERON:0009113!5.29e-12!4;UBERON:0003295!5.29e-12!4;UBERON:0005562!5.29e-12!4;UBERON:0004177!2.43e-11!7;UBERON:0003351!3.88e-08!6;UBERON:0001042!4.94e-08!10;UBERON:0009145!4.94e-08!10;UBERON:0008814!6.96e-08!15;UBERON:0006562!2.65e-07!11;UBERON:0009722!2.97e-07!11;UBERON:0007690!2.97e-07!11 | |ontology_enrichment_uberon=UBERON:0002370!5.29e-12!4;UBERON:0005058!5.29e-12!4;UBERON:0009113!5.29e-12!4;UBERON:0003295!5.29e-12!4;UBERON:0005562!5.29e-12!4;UBERON:0004177!2.43e-11!7;UBERON:0003351!3.88e-08!6;UBERON:0001042!4.94e-08!10;UBERON:0009145!4.94e-08!10;UBERON:0008814!6.96e-08!15;UBERON:0006562!2.65e-07!11;UBERON:0009722!2.97e-07!11;UBERON:0007690!2.97e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.61e-34;2!UBERON:0005058;3.61e-34;2!UBERON:0009113;3.61e-34;2!UBERON:0004177;1.40e-14;5!UBERON:0005057;1.40e-14;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;3.61e-34;2!UBERON:0005058;3.61e-34;2!UBERON:0009113;3.61e-34;2!UBERON:0004177;1.40e-14;5!UBERON:0005057;1.40e-14;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.35e-66,4;UBERON:0005058,3.35e-66,4;UBERON:0009113,3.35e-66,4;UBERON:0003295,3.35e-66,4;UBERON:0005562,3.35e-66,4;UBERON:0003351,1.22e-44,6;UBERON:0004177,1.80e-38,7;UBERON:0005057,1.80e-38,7;UBERON:0000974,2.38e-27,10;UBERON:0003408,2.38e-27,10;UBERON:0001042,2.38e-27,10;UBERON:0009145,2.38e-27,10;UBERON:0006562,5.49e-25,11;UBERON:0009722,5.49e-25,11;UBERON:0007690,5.49e-25,11;UBERON:0008814,9.05e-16,18;UBERON:0001557,5.27e-15,19;UBERON:0004807,1.47e-10,28;UBERON:0000077,3.10e-10,29;UBERON:0002368,1.14e-08,35;UBERON:0000949,5.58e-07,45;UBERON:0000072,1.00e-06,47 | |||
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|short_description=p@chr11:118209514..118209525,+ | |short_description=p@chr11:118209514..118209525,+ | ||
}} | }} |
Latest revision as of 18:45, 23 July 2015
Short description: | p@chr11:118209514..118209525, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:118209514..118209525, + |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.35e-66 | 4 |
hemolymphoid system gland | 3.35e-66 | 4 |
thymic region | 3.35e-66 | 4 |
pharyngeal gland | 3.35e-66 | 4 |
thymus primordium | 3.35e-66 | 4 |
pharyngeal epithelium | 1.22e-44 | 6 |
hemopoietic organ | 1.80e-38 | 7 |
immune organ | 1.80e-38 | 7 |
neck | 2.38e-27 | 10 |
gland of gut | 2.38e-27 | 10 |
chordate pharynx | 2.38e-27 | 10 |
pharyngeal region of foregut | 2.38e-27 | 10 |
pharynx | 5.49e-25 | 11 |
entire pharyngeal arch endoderm | 5.49e-25 | 11 |
early pharyngeal endoderm | 5.49e-25 | 11 |
pharyngeal arch system | 9.05e-16 | 18 |
upper respiratory tract | 5.27e-15 | 19 |
respiratory system epithelium | 1.47e-10 | 28 |
mixed endoderm/mesoderm-derived structure | 3.10e-10 | 29 |
endocrine gland | 1.14e-08 | 35 |
endocrine system | 5.58e-07 | 45 |
segment of respiratory tract | 1.00e-06 | 47 |