FFCP PHASE1:Hg19::chr10:51501678..51501701,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:51501678..51501701,+ | |||
|coexpression_cluster_id=C28 | |coexpression_cluster_id=C28 | ||
|description=CAGE_peak_at_chr10:51501678..51501701,+ | |description=CAGE_peak_at_chr10:51501678..51501701,+ | ||
|id=chr10:51501678..51501701,+ | |id=chr10:51501678..51501701,+ | ||
|ontology_enrichment_celltype=CL:0000625!2.55e-18!11;CL:0000791!8.54e-15!18;CL:0000789!8.54e-15!18;CL:0002420!8.54e-15!18;CL:0002419!8.54e-15!18;CL:0000790!8.54e-15!18;CL:0000084!1.63e-13!25;CL:0000827!1.63e-13!25;CL:0000842!1.75e-08!3;CL:0000838!2.10e-07!52;CL:0000542!3.08e-07!53;CL:0000051!3.08e-07!53 | |ontology_enrichment_celltype=CL:0000625!2.55e-18!11;CL:0000791!8.54e-15!18;CL:0000789!8.54e-15!18;CL:0002420!8.54e-15!18;CL:0002419!8.54e-15!18;CL:0000790!8.54e-15!18;CL:0000084!1.63e-13!25;CL:0000827!1.63e-13!25;CL:0000842!1.75e-08!3;CL:0000838!2.10e-07!52;CL:0000542!3.08e-07!53;CL:0000051!3.08e-07!53 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.76e-30!15;UBERON:0000179!1.76e-30!15;UBERON:0000463!1.76e-30!15;UBERON:0004177!2.02e-13!7;UBERON:0007023!2.53e-08!115;UBERON:0002106!3.99e-08!3;UBERON:0004854!3.99e-08!3;UBERON:0009034!3.99e-08!3;UBERON:0002095!3.99e-08!3;UBERON:0004782!3.99e-08!3;UBERON:0003281!3.99e-08!3;UBERON:0009664!3.99e-08!3;UBERON:0002296!3.99e-08!3;UBERON:0005602!3.99e-08!3;UBERON:0001179!3.99e-08!3;UBERON:0006293!3.99e-08!3;UBERON:0001154!2.37e-07!1;UBERON:0001153!2.37e-07!1;UBERON:0002193!2.92e-07!112;UBERON:0000989!3.20e-07!1;UBERON:0008811!3.20e-07!1;UBERON:0006258!3.20e-07!1;UBERON:0005876!3.20e-07!1;UBERON:0004874!3.20e-07!1;UBERON:0001736!3.60e-07!1;UBERON:0006298!3.60e-07!1;UBERON:0002370!4.19e-07!4;UBERON:0005058!4.19e-07!4;UBERON:0009113!4.19e-07!4;UBERON:0003295!4.19e-07!4;UBERON:0005562!4.19e-07!4;UBERON:0002390!5.29e-07!102;UBERON:0003061!5.29e-07!102;UBERON:0002372!5.78e-07!1;UBERON:0001961!5.78e-07!1;UBERON:0001744!5.78e-07!1;UBERON:0001735!5.78e-07!1;UBERON:0002146!7.29e-07!1;UBERON:0005623!7.29e-07!1 | |ontology_enrichment_uberon=UBERON:0000178!1.76e-30!15;UBERON:0000179!1.76e-30!15;UBERON:0000463!1.76e-30!15;UBERON:0004177!2.02e-13!7;UBERON:0007023!2.53e-08!115;UBERON:0002106!3.99e-08!3;UBERON:0004854!3.99e-08!3;UBERON:0009034!3.99e-08!3;UBERON:0002095!3.99e-08!3;UBERON:0004782!3.99e-08!3;UBERON:0003281!3.99e-08!3;UBERON:0009664!3.99e-08!3;UBERON:0002296!3.99e-08!3;UBERON:0005602!3.99e-08!3;UBERON:0001179!3.99e-08!3;UBERON:0006293!3.99e-08!3;UBERON:0001154!2.37e-07!1;UBERON:0001153!2.37e-07!1;UBERON:0002193!2.92e-07!112;UBERON:0000989!3.20e-07!1;UBERON:0008811!3.20e-07!1;UBERON:0006258!3.20e-07!1;UBERON:0005876!3.20e-07!1;UBERON:0004874!3.20e-07!1;UBERON:0001736!3.60e-07!1;UBERON:0006298!3.60e-07!1;UBERON:0002370!4.19e-07!4;UBERON:0005058!4.19e-07!4;UBERON:0009113!4.19e-07!4;UBERON:0003295!4.19e-07!4;UBERON:0005562!4.19e-07!4;UBERON:0002390!5.29e-07!102;UBERON:0003061!5.29e-07!102;UBERON:0002372!5.78e-07!1;UBERON:0001961!5.78e-07!1;UBERON:0001744!5.78e-07!1;UBERON:0001735!5.78e-07!1;UBERON:0002146!7.29e-07!1;UBERON:0005623!7.29e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.21e-98;2!UBERON:0005058;1.21e-98;2!UBERON:0009113;1.21e-98;2!UBERON:0004177;2.45e-40;5!UBERON:0005057;2.45e-40;5!UBERON:0002390;1.59e-12;32!UBERON:0002193;4.04e-09;42!UBERON:0000077;2.10e-08;27!UBERON:0002405;2.10e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.00e-50,4;UBERON:0005058,4.00e-50,4;UBERON:0009113,4.00e-50,4;UBERON:0003295,4.00e-50,4;UBERON:0005562,4.00e-50,4;UBERON:0003351,7.07e-34,6;UBERON:0004177,3.16e-29,7;UBERON:0005057,3.16e-29,7;UBERON:0000974,7.73e-21,10;UBERON:0003408,7.73e-21,10;UBERON:0001042,7.73e-21,10;UBERON:0009145,7.73e-21,10;UBERON:0006562,4.69e-19,11;UBERON:0009722,4.69e-19,11;UBERON:0007690,4.69e-19,11;UBERON:0008814,4.31e-12,18;UBERON:0001557,1.63e-11,19;UBERON:0004807,3.78e-08,28;UBERON:0000077,6.67e-08,29 | |||
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|short_description=p@chr10:51501678..51501701,+ | |short_description=p@chr10:51501678..51501701,+ | ||
}} | }} |
Latest revision as of 14:03, 23 July 2015
Short description: | p@chr10:51501678..51501701, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:51501678..51501701, + |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 4.00e-50 | 4 |
hemolymphoid system gland | 4.00e-50 | 4 |
thymic region | 4.00e-50 | 4 |
pharyngeal gland | 4.00e-50 | 4 |
thymus primordium | 4.00e-50 | 4 |
pharyngeal epithelium | 7.07e-34 | 6 |
hemopoietic organ | 3.16e-29 | 7 |
immune organ | 3.16e-29 | 7 |
neck | 7.73e-21 | 10 |
gland of gut | 7.73e-21 | 10 |
chordate pharynx | 7.73e-21 | 10 |
pharyngeal region of foregut | 7.73e-21 | 10 |
pharynx | 4.69e-19 | 11 |
entire pharyngeal arch endoderm | 4.69e-19 | 11 |
early pharyngeal endoderm | 4.69e-19 | 11 |
pharyngeal arch system | 4.31e-12 | 18 |
upper respiratory tract | 1.63e-11 | 19 |
respiratory system epithelium | 3.78e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 6.67e-08 | 29 |