FFCP PHASE1:Hg19::chr1:158325287..158325302,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=913 | |EntrezGene=913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1638 | |HGNC=1638 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-314bp_to_uc009wsw.2_5end | |association_with_transcript=-314bp_to_uc009wsw.2_5end | ||
|cluster_id=chr1:158325287..158325302,+ | |||
|coexpression_cluster_id=C28 | |coexpression_cluster_id=C28 | ||
|description=CAGE_peak_6_at_CD1E_5end | |description=CAGE_peak_6_at_CD1E_5end | ||
|id=chr1:158325287..158325302,+ | |id=chr1:158325287..158325302,+ | ||
|ontology_enrichment_celltype=CL:0000990!4.66e-17!8;CL:0000453!4.39e-14!5;CL:0000451!4.42e-14!10;CL:0000840!5.68e-12!5;CL:0001029!5.68e-12!5;CL:0001014!1.44e-09!2;CL:0001016!1.44e-09!2 | |ontology_enrichment_celltype=CL:0000990!4.66e-17!8;CL:0000453!4.39e-14!5;CL:0000451!4.42e-14!10;CL:0000840!5.68e-12!5;CL:0001029!5.68e-12!5;CL:0001014!1.44e-09!2;CL:0001016!1.44e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.35e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.35e-07,25;CL:0000827,2.35e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006965;6.96e-21;2!UBERON:0004872;6.39e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.30e-22!7;UBERON:0002370!7.39e-18!4;UBERON:0005058!7.39e-18!4;UBERON:0009113!7.39e-18!4;UBERON:0003295!7.39e-18!4;UBERON:0005562!7.39e-18!4;UBERON:0002336!1.44e-17!1;UBERON:0001018!1.44e-17!1;UBERON:0002473!1.44e-17!1;UBERON:0005340!1.44e-17!1;UBERON:0002316!1.44e-17!1;UBERON:0003544!1.44e-17!1;UBERON:0001020!1.44e-17!1;UBERON:0005970!1.44e-17!1;UBERON:0002437!1.44e-17!1;UBERON:0000974!9.56e-16!10;UBERON:0003351!3.08e-12!6;UBERON:0000341!1.22e-09!2;UBERON:0005162!1.86e-09!2;UBERON:0000122!1.86e-09!2;UBERON:0003408!1.05e-07!10;UBERON:0001042!1.05e-07!10;UBERON:0009145!1.05e-07!10;UBERON:0006562!4.43e-07!11;UBERON:0009722!4.43e-07!11;UBERON:0007690!4.43e-07!11 | |ontology_enrichment_uberon=UBERON:0004177!5.30e-22!7;UBERON:0002370!7.39e-18!4;UBERON:0005058!7.39e-18!4;UBERON:0009113!7.39e-18!4;UBERON:0003295!7.39e-18!4;UBERON:0005562!7.39e-18!4;UBERON:0002336!1.44e-17!1;UBERON:0001018!1.44e-17!1;UBERON:0002473!1.44e-17!1;UBERON:0005340!1.44e-17!1;UBERON:0002316!1.44e-17!1;UBERON:0003544!1.44e-17!1;UBERON:0001020!1.44e-17!1;UBERON:0005970!1.44e-17!1;UBERON:0002437!1.44e-17!1;UBERON:0000974!9.56e-16!10;UBERON:0003351!3.08e-12!6;UBERON:0000341!1.22e-09!2;UBERON:0005162!1.86e-09!2;UBERON:0000122!1.86e-09!2;UBERON:0003408!1.05e-07!10;UBERON:0001042!1.05e-07!10;UBERON:0009145!1.05e-07!10;UBERON:0006562!4.43e-07!11;UBERON:0009722!4.43e-07!11;UBERON:0007690!4.43e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.56e-79;2!UBERON:0005058;1.56e-79;2!UBERON:0009113;1.56e-79;2!UBERON:0004177;1.23e-32;5!UBERON:0005057;1.23e-32;5!UBERON:0000077;6.62e-07;27!UBERON:0002405;6.62e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.81e-40,4;UBERON:0005058,1.81e-40,4;UBERON:0009113,1.81e-40,4;UBERON:0003295,1.81e-40,4;UBERON:0005562,1.81e-40,4;UBERON:0003351,2.08e-27,6;UBERON:0004177,1.14e-23,7;UBERON:0005057,1.14e-23,7;UBERON:0000974,6.39e-17,10;UBERON:0003408,6.39e-17,10;UBERON:0001042,6.39e-17,10;UBERON:0009145,6.39e-17,10;UBERON:0006562,1.74e-15,11;UBERON:0009722,1.74e-15,11;UBERON:0007690,1.74e-15,11;UBERON:0008814,7.10e-10,18;UBERON:0001557,2.08e-09,19 | |||
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|short_description=p6@CD1E | |short_description=p6@CD1E | ||
}} | }} |
Latest revision as of 21:08, 17 September 2015
Short description: | p6@CD1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CD1E_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -314bp_to_uc009wsw.2_5end |
EntrezGene: | CD1E |
HGNC: | 1638 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.35e-07 | 25 |
pro-T cell | 2.35e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.81e-40 | 4 |
hemolymphoid system gland | 1.81e-40 | 4 |
thymic region | 1.81e-40 | 4 |
pharyngeal gland | 1.81e-40 | 4 |
thymus primordium | 1.81e-40 | 4 |
pharyngeal epithelium | 2.08e-27 | 6 |
hemopoietic organ | 1.14e-23 | 7 |
immune organ | 1.14e-23 | 7 |
neck | 6.39e-17 | 10 |
gland of gut | 6.39e-17 | 10 |
chordate pharynx | 6.39e-17 | 10 |
pharyngeal region of foregut | 6.39e-17 | 10 |
pharynx | 1.74e-15 | 11 |
entire pharyngeal arch endoderm | 1.74e-15 | 11 |
early pharyngeal endoderm | 1.74e-15 | 11 |
pharyngeal arch system | 7.10e-10 | 18 |
upper respiratory tract | 2.08e-09 | 19 |