FFCP PHASE1:Hg19::chr12:56236735..56236788,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4327 | |EntrezGene=4327 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7165 | |HGNC=7165 | ||
|TSSclassifier=strong | |||
|UniProt=Q99542 | |UniProt=Q99542 | ||
|association_with_transcript=0bp_to_ENST00000547299,ENST00000552872,NM_002429,uc001sib.2,uc001sid.2,uc010spw.1_5end | |association_with_transcript=0bp_to_ENST00000547299,ENST00000552872,NM_002429,uc001sib.2,uc001sid.2,uc010spw.1_5end | ||
|cluster_id=chr12:56236735..56236788,- | |||
|description=CAGE_peak_2_at_MMP19_5end | |description=CAGE_peak_2_at_MMP19_5end | ||
|id=chr12:56236735..56236788,- | |id=chr12:56236735..56236788,- | ||
|ontology_enrichment_celltype=CL:0000055!3.05e-28!180;CL:0000057!5.68e-23!75;CL:0000048!1.19e-17!430;CL:0000723!3.34e-17!436;CL:0002371!5.99e-17!591;CL:0000144!2.84e-16!625;CL:0000034!1.27e-15!444;CL:0000680!8.86e-14!57;CL:0000056!8.86e-14!57;CL:0000355!8.86e-14!57;CL:0000187!5.14e-13!54;CL:0000183!7.67e-13!59;CL:0000192!3.03e-11!42;CL:0000514!3.03e-11!42;CL:0000393!3.39e-11!60;CL:0000211!3.39e-11!60;CL:0000136!1.18e-09!15;CL:0002620!3.97e-09!23;CL:0002320!8.19e-09!365;CL:0000359!1.54e-08!32;CL:0000548!1.24e-07!679;CL:0000004!1.24e-07!679;CL:0000255!1.24e-07!679;CL:0000222!1.56e-07!119;CL:0000134!1.85e-07!358;CL:0000012!4.87e-07!682 | |ontology_enrichment_celltype=CL:0000055!3.05e-28!180;CL:0000057!5.68e-23!75;CL:0000048!1.19e-17!430;CL:0000723!3.34e-17!436;CL:0002371!5.99e-17!591;CL:0000144!2.84e-16!625;CL:0000034!1.27e-15!444;CL:0000680!8.86e-14!57;CL:0000056!8.86e-14!57;CL:0000355!8.86e-14!57;CL:0000187!5.14e-13!54;CL:0000183!7.67e-13!59;CL:0000192!3.03e-11!42;CL:0000514!3.03e-11!42;CL:0000393!3.39e-11!60;CL:0000211!3.39e-11!60;CL:0000136!1.18e-09!15;CL:0002620!3.97e-09!23;CL:0002320!8.19e-09!365;CL:0000359!1.54e-08!32;CL:0000548!1.24e-07!679;CL:0000004!1.24e-07!679;CL:0000255!1.24e-07!679;CL:0000222!1.56e-07!119;CL:0000134!1.85e-07!358;CL:0000012!4.87e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000134;4.74e-10;55!CL:0000057;8.53e-10;73!CL:0002620;1.10e-09;23!CL:0000723;3.00e-09;61!CL:0000136;3.58e-09;13!CL:0000192;7.24e-09;43!CL:0000048;1.04e-08;58!CL:0000359;1.96e-08;32!CL:0002320;5.38e-08;188!CL:0000187;9.50e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.21e-25,76;CL:0000048,2.16e-22,427;CL:0000723,5.19e-22,433;CL:0000034,7.47e-20,441;CL:0000680,4.67e-15,58;CL:0000056,4.67e-15,58;CL:0000355,4.67e-15,58;CL:0000187,3.11e-14,55;CL:0000192,2.49e-12,43;CL:0000514,2.49e-12,43;CL:0002320,4.28e-12,361;CL:0000393,1.61e-11,61;CL:0000211,1.61e-11,61;CL:0000134,2.09e-10,354;CL:0000136,2.94e-10,15;CL:0002620,1.08e-09,23;CL:0000359,4.62e-09,32;CL:0000219,4.76e-08,386 | |||
|ontology_enrichment_development_v019=CL:0000514;7.24e-09;43!CL:0000355;4.15e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.12e-18!83;UBERON:0002329!1.12e-18!83;UBERON:0003077!1.12e-18!83;UBERON:0003059!1.12e-18!83;UBERON:0007282!1.12e-18!83;UBERON:0009618!1.12e-18!83;UBERON:0007285!1.12e-18!83;UBERON:0000486!5.66e-16!82;UBERON:0004290!1.16e-15!70;UBERON:0002204!3.38e-15!167;UBERON:0001134!1.16e-13!61;UBERON:0002036!1.16e-13!61;UBERON:0003082!1.16e-13!61;UBERON:0002385!1.59e-13!63;UBERON:0001015!1.59e-13!63;UBERON:0000383!1.59e-13!63;UBERON:0000468!3.37e-13!659;UBERON:0003102!3.16e-11!95;UBERON:0000926!9.63e-11!448;UBERON:0004120!9.63e-11!448;UBERON:0006603!9.63e-11!448;UBERON:0005256!1.61e-10!143;UBERON:0000467!3.15e-10!625;UBERON:0000480!5.28e-10!626;UBERON:0002199!5.63e-10!45;UBERON:0002416!5.63e-10!45;UBERON:0004872!6.20e-10!84;UBERON:0002384!3.23e-09!375;UBERON:0002049!2.16e-08!79;UBERON:0007798!2.16e-08!79;UBERON:0002097!6.38e-08!40;UBERON:0000479!1.38e-07!787;UBERON:0002100!2.60e-07!216;UBERON:0003081!5.56e-07!216;UBERON:0001013!5.96e-07!14;UBERON:0004535!6.32e-07!110;UBERON:0001009!6.57e-07!113 | |ontology_enrichment_uberon=UBERON:0000914!1.12e-18!83;UBERON:0002329!1.12e-18!83;UBERON:0003077!1.12e-18!83;UBERON:0003059!1.12e-18!83;UBERON:0007282!1.12e-18!83;UBERON:0009618!1.12e-18!83;UBERON:0007285!1.12e-18!83;UBERON:0000486!5.66e-16!82;UBERON:0004290!1.16e-15!70;UBERON:0002204!3.38e-15!167;UBERON:0001134!1.16e-13!61;UBERON:0002036!1.16e-13!61;UBERON:0003082!1.16e-13!61;UBERON:0002385!1.59e-13!63;UBERON:0001015!1.59e-13!63;UBERON:0000383!1.59e-13!63;UBERON:0000468!3.37e-13!659;UBERON:0003102!3.16e-11!95;UBERON:0000926!9.63e-11!448;UBERON:0004120!9.63e-11!448;UBERON:0006603!9.63e-11!448;UBERON:0005256!1.61e-10!143;UBERON:0000467!3.15e-10!625;UBERON:0000480!5.28e-10!626;UBERON:0002199!5.63e-10!45;UBERON:0002416!5.63e-10!45;UBERON:0004872!6.20e-10!84;UBERON:0002384!3.23e-09!375;UBERON:0002049!2.16e-08!79;UBERON:0007798!2.16e-08!79;UBERON:0002097!6.38e-08!40;UBERON:0000479!1.38e-07!787;UBERON:0002100!2.60e-07!216;UBERON:0003081!5.56e-07!216;UBERON:0001013!5.96e-07!14;UBERON:0004535!6.32e-07!110;UBERON:0001009!6.57e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;7.69e-09;198!UBERON:0002199;7.11e-08;46!UBERON:0002416;7.11e-08;46!UBERON:0002097;2.15e-07;41!UBERON:0001013;2.65e-07;14!UBERON:0003102;4.86e-07;50 | |||
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|phase1_expression=23.9815460637135,16.0575392918237,15.2230756423649,12.0087958023756,10.7270662662549,20.0637860543085,20.2639902534648,12.0026775951098,21.9395927687864,2.94880723801811,0,5.89791704751465,13.1883489114227,22.0304108268883,8.94772914465373,8.74022690387308,8.43772339233568,9.49403117503585,7.3189919818576,7.01790031037691,9.9960338709684,7.8363680369522,2.57612388417951,1.91624195102038,1.75759695432724,0.0764134057479513,0,0,0.786728553697808,2.30297638858328,1.08371286321253,0,1.8072355126695,0.369754010166788,0,0,0,2.21598163412751,0.200544447470142,0.651032612147555,9.40444991807682,10.3645973126073,7.98484259665978,3.05336301437086,6.80176698639857,5.09426528494414,3.71886459049095,13.9797081927421,13.0076675775944,4.02769349251011,8.70946402198942,8.98632473576624,2.75796544589295,5.80936215225443,5.41705946377367,4.70605848856512,7.64137220161968,9.43838634669355,3.67300670845083,7.38136762275015,6.39337125799041,1.64925650093358,8.57693727773017,5.54092175692502,2.61188314765726,7.37600792098482,6.85104473895132,8.29120595347253,10.429658368404,13.9000860611275,3.63239701580021,8.10210799172642,5.69632297393592,0.422510572623884,0.212604299965044,0.419317291016752,1.23561494261145,1.95229960693958,0.64290234678832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,21.9426179682566,14.75541891348,9.46182957642124,2.89151321907653,10.5280961233537,6.0835537963546,8.74814541756209,7.78615792484217,3.68685786939865,2.88248216701333,2.3715392137144,3.53643503843824,2.5500670180478,0,2.92092654289215,4.70150290708022,4.65352861816028,0.238490624305342,0,0,0,0.860234595106124,0.694281003215189,0,0.419499436209906,0.275118041940067,0.835979866147242,0.775250277507987,1.06729878806013,1.33888245105868,3.62546385398232,0.760272105718513,2.92874469057803,0.735326160691737,2.43042584364528,1.3394959242612,0.898117490504679,0.563057402416611,0,0,0.366403487860815,0,0,1.3082821564276,13.4182426957736,11.9032680964705,14.1677823470144,27.8231522126349,10.9947198481491,5.04609840128076,5.33744978648525,6.90669135568048,13.0708634867902,8.75619368452972,6.21155231831143,8.47601594811616,13.25204626304,17.1054645238672,5.30672130611545,1.1409436430889,9.56471555531527,5.16711794032565,5.6655530528846,4.6348766211742,18.3738754129404,6.1417158655884,17.2554054563528,24.9480600029231,17.5559519787775,23.6641954103887,39.5239977998931,7.40678901397891,3.62843707628696,15.5155904671142,15.3642167308293,16.5503409731471,14.7233297728465,9.41487120228174,20.809197739908,17.5117058831225,10.172731255659,33.6102027614531,12.5724085670895,24.7334918443804,22.5201396161224,21.9409231913646,14.5181137690186,18.4276655198204,18.4099797284599,10.9919318636792,39.4060647693442,12.6947643766827,10.8518779078712,1.54608682530637,4.09119180886252,2.00763216772303,0.121973706129595,0.397589304964456,0.232387885739037,0.725627385107593,0,0,14.0804579096834,25.0863965895225,17.9575397758225,15.7885095530873,12.271951188383,0.118306800039844,0,0,0,0,0,0,0,0,0,7.01208869017229,16.462960453256,13.2307840246988,0,0.982827216677626,1.77236972004421,0,0.983907508344908,4.46076306776166,1.42675371031213,4.49607013030478,1.10581869652794,2.03694579348765,7.16778271682714,9.35941306751621,1.44331342025273,2.20267769452646,5.16598254637615,5.05282567163758,2.31492756288305,4.94660795809955,0,0,13.0495013226321,21.0603838625314,16.943952500915,4.68669169933885,7.55919576894868,2.26840155587818,1.25381931783988,0.581267877027924,1.15014803749563,0,0,0.829312462163088,0.144119953416961,0,0.253991577168676,0,0,3.4214489204541,0.822619941626588,0,0,7.62491373548453,4.79556075716608,6.7471222955274,11.2466392709267,39.3422090437071,5.917119267892,11.7012771297343,8.32059495290929,5.40135485950498,8.5109479213967,10.1240428026118,15.4416233150799,25.5032154533978,9.87888404136923,8.79487697593085,11.727934308504,4.75171123760058,14.1676507218005,7.84380112740265,7.99783929456456,4.86495122564762,10.0451418286425,4.21667878966063,1.67737398844108,1.14861935834114,4.27910715122155,8.39731578671959,7.80810025691457,9.66929201495436,0,0,0,0,1.77866236955724,1.30139853857622,0.773288812777695,1.17261385734044,0,0,0,0,25.397138785862,18.0061387581484,7.05289061619313,7.90289273817067,10.8841683166269,11.5122762974772,7.9656162195045,8.12554469264841,11.3703752027992,9.31257641632544,9.96338397803155,3.13427586520895,12.8587749412763,7.04884166865866,5.83343820478455,0.413536052245775,0.215714200818617,0.320182673410333,1.5156378572313,13.3148351608398,6.04780586659361,14.8864684691266,24.0935298062258,7.85848264412606,15.3766979106841,12.2809739776009,10.1337970320473,16.325987308949,8.17311377154074,15.9805552781814,8.62335138144996,14.5391240171414,7.55367459989735,0.120859449591622,1.60405176242628,0,8.84071250867472,14.9314757765508,9.30983346211911,0,0.462092022626489,0,0,0,1.13733384070897,1.02056223165909,0.863663664408557,0,2.43851793789468,1.50506932156456,0.50975254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| ||
|short_description=p2@MMP19 | |short_description=p2@MMP19 | ||
}} | }} |
Latest revision as of 08:35, 19 September 2015
Short description: | p2@MMP19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MMP19_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000547299, ENST00000552872, NM_002429, uc001sib.2, uc001sid.2, uc010spw.1_5end |
EntrezGene: | MMP19 |
HGNC: | 7165 |
UniProt: | Q99542 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.21e-25 | 76 |
multi fate stem cell | 2.16e-22 | 427 |
somatic stem cell | 5.19e-22 | 433 |
stem cell | 7.47e-20 | 441 |
muscle precursor cell | 4.67e-15 | 58 |
myoblast | 4.67e-15 | 58 |
multi-potent skeletal muscle stem cell | 4.67e-15 | 58 |
muscle cell | 3.11e-14 | 55 |
smooth muscle cell | 2.49e-12 | 43 |
smooth muscle myoblast | 2.49e-12 | 43 |
connective tissue cell | 4.28e-12 | 361 |
electrically responsive cell | 1.61e-11 | 61 |
electrically active cell | 1.61e-11 | 61 |
mesenchymal cell | 2.09e-10 | 354 |
fat cell | 2.94e-10 | 15 |
skin fibroblast | 1.08e-09 | 23 |
vascular associated smooth muscle cell | 4.62e-09 | 32 |
motile cell | 4.76e-08 | 386 |