FFCP PHASE1:Hg19::chr1:1981834..1981887,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:1981834..1981887,+
|short_description=p6@PRKCZ
|description=CAGE_peak_6_at_PRKCZ_5end
|association_with_transcript=-21bp_to_ENST00000378567,NM_002744,uc001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5590 | |EntrezGene=5590 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9412 | |HGNC=9412 | ||
|TSSclassifier=strong | |||
|UniProt=Q05513 | |UniProt=Q05513 | ||
|association_with_transcript=-21bp_to_ENST00000378567,NM_002744,uc001aiq.2_5end | |||
|cluster_id=chr1:1981834..1981887,+ | |||
|description=CAGE_peak_6_at_PRKCZ_5end | |||
|id=chr1:1981834..1981887,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.55e-27!254;CL:0000223!9.31e-13!59;CL:0002076!6.30e-12!43;CL:0002368!4.47e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.51e-10;42!CL:0002368;9.66e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.09e-26,253;CL:0000223,1.30e-13,58;CL:0002076,1.55e-13,42;CL:0002368,9.80e-08,13 | |||
|ontology_enrichment_development_v019=CL:0000223;3.30e-08;58 | |||
|ontology_enrichment_disease=DOID:305!7.72e-19!106;DOID:0050687!2.70e-16!143;DOID:299!6.73e-07!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.25e-15,106;DOID:0050687,2.11e-12,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.87e-13!169;UBERON:0000925!1.87e-13!169;UBERON:0006595!1.87e-13!169;UBERON:0004921!2.98e-12!129;UBERON:0004185!2.98e-12!129;UBERON:0000077!6.68e-12!130;UBERON:0000464!7.58e-11!104;UBERON:0001041!1.48e-10!98;UBERON:0005177!2.01e-10!107;UBERON:0001007!2.26e-10!155;UBERON:0001555!2.26e-10!155;UBERON:0007026!2.26e-10!155;UBERON:0000466!2.31e-10!126;UBERON:0001004!9.22e-09!72;UBERON:0000065!1.11e-08!53;UBERON:0008947!3.58e-07!38;UBERON:0003258!3.58e-07!38;UBERON:0002048!6.87e-07!22;UBERON:0000117!6.87e-07!22;UBERON:0000171!6.87e-07!22;UBERON:0000170!6.87e-07!22;UBERON:0005597!6.87e-07!22;UBERON:0000118!6.87e-07!22;UBERON:0005157!7.66e-07!51;UBERON:0001048!8.24e-07!168;UBERON:0005178!8.67e-07!34;UBERON:0002224!8.67e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;7.54e-08;30!UBERON:0001008;7.54e-08;30!UBERON:0004921;7.35e-07;33!UBERON:0002113;9.06e-07;24!UBERON:0011143;9.06e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.94e-12,160;UBERON:0000925,1.94e-12,160;UBERON:0006595,1.94e-12,160;UBERON:0005177,9.81e-12,101;UBERON:0004921,2.16e-10,118;UBERON:0006554,1.67e-09,47;UBERON:0001008,4.56e-09,48;UBERON:0001007,4.84e-09,145;UBERON:0001555,4.84e-09,145;UBERON:0007026,4.84e-09,145;UBERON:0001041,3.38e-08,87;UBERON:0009569,8.36e-08,112;UBERON:0005631,2.78e-07,14;UBERON:0000158,2.78e-07,14;UBERON:0001004,3.98e-07,74;UBERON:0002113,4.29e-07,26;UBERON:0003918,4.29e-07,26;UBERON:0011143,4.29e-07,26;UBERON:0005095,4.29e-07,26;UBERON:0007687,4.29e-07,26 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,3.93174298402414,8.37361401566913,2.83973783769224,5.80287352102598,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0.273748850145768,0.251085279189606,0,0,0,1.96682138424452,0,0.309632246632152,2.75826367343678,3.91567694411725,4.43704812200145,0,2.55904618477359,2.05520307534393,0,0.200544447470142,1.30206522429511,0,0.647787332037959,0,0.145398238779565,0.377875943688809,0,0.464858073811369,0,0.619412741790207,0,0.256160706529101,0,0,0,1.35426486594342,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,2.18455444504853,0.889509253863555,1.28019066769952,1.60158394814405,1.14950487990897,1.98313461835459,0.954053754535364,2.27685187643779,3.52342313622563,2.29363936875137,2.64342657158052,1.68152568894461,0,1.96709770113833,3.14408610199332,2.05601498999509,1.17030546773475,2.28145586643513,1.89379122293893,1.94826728407911,1.11410456885174,1.47302953737419,2.43687284041983,1.35401931882508,2.43373507478783,3.25148368899696,0.657751618414705,1.38175008892924,1.73881851441031,2.07601188426885,3.21048993707656,1.04535523804977,0.793165398882963,4.98186641682498,2.06176467289578,1.51811815211702,2.22995790026868,1.95325036156926,1.90090408889675,1.20460095262218,1.27986611154418,2.49861453104692,1.65744076430812,2.46338399076314,1.61285394579786,1.06976078313403,2.31719046212478,0,0,0.511450247374121,0,0,0,0,0,0.850813354476611,1.10864698731282,1.40535657109002,2.5540919722054,2.91436230634034,7.41568885568859,0,0,0.132957960518865,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0.760272105718513,4.63717909341522,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,0,2.61656431285521,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,1.93260853163297,1.09098448236334,1.43402297694502,5.73276418809098,7.55419679432466,4.76395165765025,4.25010325563019,6.05570042101508,4.01475094983413,0,0,0,0,0,1.18306800039844,1.18009283054671,0.482022059766964,0.992645754591546,0.871517776369625,1.18635309555548,0.674156540800822,0.392442930250692,0.769494313892781,0.738155454624648,0,0,0,2.53510069643662,1.96565443335525,1.18157981336281,0,2.09080345523293,0.171567810298526,4.39001141634502,3.37205259772859,2.51322431029077,3.61094936118265,0,0,0,1.85488647960123,0.939269553886573,0,0.462985512576611,0.951270761172991,3.95102198979638,1.71697232418975,0,0,0.148631162288728,3.74935335947108,1.84780341018745,1.41775097242386,1.52249488594842,1.16253575405585,4.21720947081732,0.985326475791887,1.40877494421162,1.24396869324463,1.58531948758658,3.40854570251226,0,0.381988425558278,0,1.71072446022705,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,4.52159065589379,2.61460037580088,4.39881161201051,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,0.985153801009636,1.2937654491571,2.31017465303547,0,0,0,0.167516265334349,0,1.49801404789436,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.431428401637234,1.28073069364133,6.36567900037145,8.32177197552485,10.5836602665388,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,3.20810352485256,4.8802924136025,0,0,0,4.06079651616671,2.77255213575893,3.13739907670742,0,3.27210049567915,0,0,0.431831832204279,3.08454505380579,5.96082162596476,16.0540727633553,2.80363900349542,5.81753206250107,6.49236788694317,0,0,2.82095137628028,5.9042636225947,2.60302715731442,2.67906630284078,0,0,6.89118645595407,2.60024098414608,0,0,0,0,0,0,0,0.0852266274161009,0,2.80984356113663,4.22818148203234,4.08360679982669,6.2717824130441,0,0,0,0,0,0,0.37064843820784,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392996164052485,0,0,0,0,0,0,3.36777394539292,2.01090682660736,3.26672954583968,2.35359501941948,2.15252686335615,0,3.99087138183008,7.3511488066227,1.01489521846434,0,1.70894156152249,1.66762242820452,0,1.29694662238543,1.62009431171434,1.58625035258854,3.63201841833409,0,5.3908847515827,0,0,0,0,0.997896857164083,0.191505370132367,0,0,0,0,0,2.50634477090067,0.338583555603207,0,0,0.851692475380653,0,0.614481528616916,0.671028323677248,0.834245708559542,0,0,0,0.811367035427949,0,0,0.748562161632879,0.146508179271894,2.6699314784893,0,0.284136146806413,4.53614521001611,4.75143489332222,4.30024982938925,0,0.281338832821026,0,0.988823245360557,2.95575571379191,0,3.31540698637377,1.76352923497993,0,0.246169610922139,0,3.41499734359842,1.79021174675609,0,0.493217028184668,2.3948309234694,0,0,0.185536196323703,0,2.86470537193757,3.49839999984783,2.17499872630438,2.38966241399549,3.30529745380596,9.92828263425333,5.8606373451049,0.874813840149763,0.347249989866585,0.885741385813839,0.120596438625408,6.10326945268333,7.40881041539205,7.68423809279223,0.219385397153973,0.32681539055697,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| ||
|short_description=p6@PRKCZ | |||
}} | }} |
Latest revision as of 13:58, 19 September 2015
Short description: | p6@PRKCZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PRKCZ_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_ENST00000378567, NM_002744, uc001aiq.2_5end |
EntrezGene: | PRKCZ |
HGNC: | 9412 |
UniProt: | Q05513 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.09e-26 | 253 |
endodermal cell | 1.30e-13 | 58 |
endo-epithelial cell | 1.55e-13 | 42 |
respiratory epithelial cell | 9.80e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.94e-12 | 160 |
endoderm | 1.94e-12 | 160 |
presumptive endoderm | 1.94e-12 | 160 |
trunk region element | 9.81e-12 | 101 |
subdivision of digestive tract | 2.16e-10 | 118 |
urinary system structure | 1.67e-09 | 47 |
renal system | 4.56e-09 | 48 |
digestive system | 4.84e-09 | 145 |
digestive tract | 4.84e-09 | 145 |
primitive gut | 4.84e-09 | 145 |
foregut | 3.38e-08 | 87 |
subdivision of trunk | 8.36e-08 | 112 |
extraembryonic membrane | 2.78e-07 | 14 |
membranous layer | 2.78e-07 | 14 |
respiratory system | 3.98e-07 | 74 |
kidney | 4.29e-07 | 26 |
kidney mesenchyme | 4.29e-07 | 26 |
upper urinary tract | 4.29e-07 | 26 |
kidney rudiment | 4.29e-07 | 26 |
kidney field | 4.29e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.25e-15 | 106 |
cell type cancer | 2.11e-12 | 143 |