FFCP PHASE1:Hg19::chr8:127570603..127570648,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=157638 | |EntrezGene=157638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24166 | |HGNC=24166 | ||
|TSSclassifier=strong | |||
|UniProt=Q96KN1 | |UniProt=Q96KN1 | ||
|association_with_transcript=0bp_to_ENST00000304916_5end | |association_with_transcript=0bp_to_ENST00000304916_5end | ||
|cluster_id=chr8:127570603..127570648,- | |||
|coexpression_cluster_id=C86 | |coexpression_cluster_id=C86 | ||
|description=CAGE_peak_1_at_FAM84B_5end | |description=CAGE_peak_1_at_FAM84B_5end | ||
|id=chr8:127570603..127570648,- | |id=chr8:127570603..127570648,- | ||
|ontology_enrichment_celltype=CL:0000066!7.99e-40!254;CL:0000076!1.49e-08!62;CL:0000223!6.25e-08!59;CL:0002076!9.62e-08!43;CL:1000497!2.98e-07!18;CL:0002518!2.98e-07!18;CL:1000449!4.50e-07!16 | |ontology_enrichment_celltype=CL:0000066!7.99e-40!254;CL:0000076!1.49e-08!62;CL:0000223!6.25e-08!59;CL:0002076!9.62e-08!43;CL:1000497!2.98e-07!18;CL:0002518!2.98e-07!18;CL:1000449!4.50e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000497;6.45e-08;17!CL:0002518;6.45e-08;17!CL:1000449;8.89e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.76e-40,253;CL:0002076,1.83e-08,42;CL:0000076,2.27e-08,63;CL:0000223,3.40e-08,58;CL:1000497,5.68e-08,17;CL:0002518,5.68e-08,17;CL:1000449,7.85e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.03e-17!106;DOID:0050687!7.34e-16!143;DOID:299!2.17e-08!25;DOID:1749!7.49e-07!14 | |ontology_enrichment_disease=DOID:305!1.03e-17!106;DOID:0050687!7.34e-16!143;DOID:299!2.17e-08!25;DOID:1749!7.49e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:299;9.87e-09;25!DOID:1749;5.21e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.11e-17,106;DOID:0050687,4.24e-16,143;DOID:299,9.40e-09,25;DOID:1749,4.95e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000064!1.15e-13!219;UBERON:0000466!1.48e-13!126;UBERON:0005177!3.23e-13!107;UBERON:0000464!2.00e-12!104;UBERON:0000924!1.60e-11!173;UBERON:0006601!1.60e-11!173;UBERON:0004119!3.55e-11!169;UBERON:0000925!3.55e-11!169;UBERON:0006595!3.55e-11!169;UBERON:0004121!3.52e-10!169;UBERON:0009569!5.29e-10!113;UBERON:0000489!5.33e-10!32;UBERON:0004921!8.31e-10!129;UBERON:0004185!8.31e-10!129;UBERON:0002346!1.25e-09!90;UBERON:0002113!2.03e-09!27;UBERON:0003918!2.03e-09!27;UBERON:0005095!2.03e-09!27;UBERON:0007687!2.03e-09!27;UBERON:0001048!2.30e-09!168;UBERON:0005743!2.81e-09!86;UBERON:0007023!5.44e-09!115;UBERON:0001007!6.21e-09!155;UBERON:0001555!6.21e-09!155;UBERON:0007026!6.21e-09!155;UBERON:0000077!9.03e-09!130;UBERON:0002553!1.40e-08!70;UBERON:0004111!1.83e-08!241;UBERON:0001041!2.54e-08!98;UBERON:0000073!2.61e-08!94;UBERON:0001016!2.61e-08!94;UBERON:0001008!3.14e-08!45;UBERON:0003075!3.77e-08!86;UBERON:0007284!3.77e-08!86;UBERON:0000153!5.08e-08!129;UBERON:0007811!5.08e-08!129;UBERON:0000033!5.24e-08!123;UBERON:0006554!5.95e-08!44;UBERON:0003056!6.68e-08!61;UBERON:0005911!7.86e-08!82;UBERON:0000058!8.66e-08!26;UBERON:0000080!9.67e-08!18;UBERON:0002120!9.67e-08!18;UBERON:0004875!9.67e-08!18;UBERON:0005721!9.67e-08!18;UBERON:0005754!9.67e-08!18;UBERON:0007297!9.67e-08!18;UBERON:0001017!1.01e-07!82;UBERON:0000481!1.10e-07!347;UBERON:0000063!1.44e-07!97;UBERON:0000062!1.52e-07!511;UBERON:0005172!2.18e-07!55;UBERON:0005173!2.18e-07!55;UBERON:0006555!2.23e-07!17;UBERON:0005103!2.23e-07!17;UBERON:0000083!2.23e-07!17;UBERON:0009201!2.23e-07!17;UBERON:0004819!2.23e-07!17;UBERON:0006553!2.23e-07!17;UBERON:0003074!2.23e-07!17;UBERON:0003060!2.23e-07!17;UBERON:0003886!2.89e-07!63;UBERON:0004211!4.50e-07!16;UBERON:0001285!4.50e-07!16;UBERON:0007684!4.50e-07!16;UBERON:0003220!4.50e-07!16;UBERON:0004208!4.50e-07!16;UBERON:0000025!5.05e-07!194;UBERON:0004876!6.72e-07!20;UBERON:0000483!8.62e-07!309 | |ontology_enrichment_uberon=UBERON:0000064!1.15e-13!219;UBERON:0000466!1.48e-13!126;UBERON:0005177!3.23e-13!107;UBERON:0000464!2.00e-12!104;UBERON:0000924!1.60e-11!173;UBERON:0006601!1.60e-11!173;UBERON:0004119!3.55e-11!169;UBERON:0000925!3.55e-11!169;UBERON:0006595!3.55e-11!169;UBERON:0004121!3.52e-10!169;UBERON:0009569!5.29e-10!113;UBERON:0000489!5.33e-10!32;UBERON:0004921!8.31e-10!129;UBERON:0004185!8.31e-10!129;UBERON:0002346!1.25e-09!90;UBERON:0002113!2.03e-09!27;UBERON:0003918!2.03e-09!27;UBERON:0005095!2.03e-09!27;UBERON:0007687!2.03e-09!27;UBERON:0001048!2.30e-09!168;UBERON:0005743!2.81e-09!86;UBERON:0007023!5.44e-09!115;UBERON:0001007!6.21e-09!155;UBERON:0001555!6.21e-09!155;UBERON:0007026!6.21e-09!155;UBERON:0000077!9.03e-09!130;UBERON:0002553!1.40e-08!70;UBERON:0004111!1.83e-08!241;UBERON:0001041!2.54e-08!98;UBERON:0000073!2.61e-08!94;UBERON:0001016!2.61e-08!94;UBERON:0001008!3.14e-08!45;UBERON:0003075!3.77e-08!86;UBERON:0007284!3.77e-08!86;UBERON:0000153!5.08e-08!129;UBERON:0007811!5.08e-08!129;UBERON:0000033!5.24e-08!123;UBERON:0006554!5.95e-08!44;UBERON:0003056!6.68e-08!61;UBERON:0005911!7.86e-08!82;UBERON:0000058!8.66e-08!26;UBERON:0000080!9.67e-08!18;UBERON:0002120!9.67e-08!18;UBERON:0004875!9.67e-08!18;UBERON:0005721!9.67e-08!18;UBERON:0005754!9.67e-08!18;UBERON:0007297!9.67e-08!18;UBERON:0001017!1.01e-07!82;UBERON:0000481!1.10e-07!347;UBERON:0000063!1.44e-07!97;UBERON:0000062!1.52e-07!511;UBERON:0005172!2.18e-07!55;UBERON:0005173!2.18e-07!55;UBERON:0006555!2.23e-07!17;UBERON:0005103!2.23e-07!17;UBERON:0000083!2.23e-07!17;UBERON:0009201!2.23e-07!17;UBERON:0004819!2.23e-07!17;UBERON:0006553!2.23e-07!17;UBERON:0003074!2.23e-07!17;UBERON:0003060!2.23e-07!17;UBERON:0003886!2.89e-07!63;UBERON:0004211!4.50e-07!16;UBERON:0001285!4.50e-07!16;UBERON:0007684!4.50e-07!16;UBERON:0003220!4.50e-07!16;UBERON:0004208!4.50e-07!16;UBERON:0000025!5.05e-07!194;UBERON:0004876!6.72e-07!20;UBERON:0000483!8.62e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.45e-10;30!UBERON:0001008;3.45e-10;30!UBERON:0000489;4.47e-10;29!UBERON:0002113;1.89e-09;24!UBERON:0011143;1.89e-09;24!UBERON:0006555;8.89e-08;15!UBERON:0004819;8.89e-08;15!UBERON:0001285;8.89e-08;15!UBERON:0007684;8.89e-08;15!UBERON:0007625;8.46e-07;11 | |||
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| ||
|short_description=p1@FAM84B | |short_description=p1@FAM84B | ||
}} | }} |
Latest revision as of 04:28, 16 September 2015
Short description: | p1@FAM84B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM84B_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | 0bp_to_ENST00000304916_5end |
EntrezGene: | FAM84B |
HGNC: | 24166 |
UniProt: | Q96KN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.76e-40 | 253 |
endo-epithelial cell | 1.83e-08 | 42 |
squamous epithelial cell | 2.27e-08 | 63 |
endodermal cell | 3.40e-08 | 58 |
kidney cell | 5.68e-08 | 17 |
kidney epithelial cell | 5.68e-08 | 17 |
epithelial cell of nephron | 7.85e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.11e-17 | 106 |
cell type cancer | 4.24e-16 | 143 |
adenocarcinoma | 9.40e-09 | 25 |
squamous cell carcinoma | 4.95e-07 | 14 |