FFCP PHASE1:Hg19::chr12:53343633..53343696,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3856 | |EntrezGene=3856 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6446 | |HGNC=6446 | ||
|TSSclassifier=strong | |||
|UniProt=F8VUG2 | |UniProt=F8VUG2 | ||
|association_with_transcript=0bp_to_ENST00000546826,ENST00000552877_5end | |association_with_transcript=0bp_to_ENST00000546826,ENST00000552877_5end | ||
|cluster_id=chr12:53343633..53343696,- | |||
|coexpression_cluster_id=C3291 | |coexpression_cluster_id=C3291 | ||
|description=CAGE_peak_2_at_KRT8_5end | |description=CAGE_peak_2_at_KRT8_5end | ||
|id=chr12:53343633..53343696,- | |id=chr12:53343633..53343696,- | ||
|ontology_enrichment_celltype=CL:0000066!1.38e-30!254;CL:0000220!8.28e-18!246;CL:0002321!9.05e-18!248;CL:0000222!4.63e-17!119;CL:0002139!1.79e-11!24;CL:0000183!1.92e-11!59;CL:0000012!3.52e-11!682;CL:0000115!4.77e-11!35;CL:0000548!7.03e-11!679;CL:0000004!7.03e-11!679;CL:0000255!7.03e-11!679;CL:0000076!1.98e-09!62;CL:0000213!2.45e-09!57;CL:0000215!2.45e-09!57;CL:0000187!2.65e-09!54;CL:0000071!4.48e-09!18;CL:0002546!4.48e-09!18;CL:0002078!6.37e-09!44;CL:0000192!6.91e-09!42;CL:0000514!6.91e-09!42;CL:0000680!8.75e-08!57;CL:0000056!8.75e-08!57;CL:0000355!8.75e-08!57;CL:0000393!1.05e-07!60;CL:0000211!1.05e-07!60;CL:1000497!2.09e-07!18;CL:0002518!2.09e-07!18;CL:0000055!3.12e-07!180 | |ontology_enrichment_celltype=CL:0000066!1.38e-30!254;CL:0000220!8.28e-18!246;CL:0002321!9.05e-18!248;CL:0000222!4.63e-17!119;CL:0002139!1.79e-11!24;CL:0000183!1.92e-11!59;CL:0000012!3.52e-11!682;CL:0000115!4.77e-11!35;CL:0000548!7.03e-11!679;CL:0000004!7.03e-11!679;CL:0000255!7.03e-11!679;CL:0000076!1.98e-09!62;CL:0000213!2.45e-09!57;CL:0000215!2.45e-09!57;CL:0000187!2.65e-09!54;CL:0000071!4.48e-09!18;CL:0002546!4.48e-09!18;CL:0002078!6.37e-09!44;CL:0000192!6.91e-09!42;CL:0000514!6.91e-09!42;CL:0000680!8.75e-08!57;CL:0000056!8.75e-08!57;CL:0000355!8.75e-08!57;CL:0000393!1.05e-07!60;CL:0000211!1.05e-07!60;CL:1000497!2.09e-07!18;CL:0002518!2.09e-07!18;CL:0000055!3.12e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.11e-11;24!CL:0000115;1.82e-09;36!CL:0000071;3.13e-09;18!CL:1000497;2.32e-07;17!CL:0002518;2.32e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.26e-30,253;CL:0002321,1.03e-18,250;CL:0000222,8.86e-18,121;CL:0002139,1.08e-11,24;CL:0000115,2.41e-11,36;CL:0000187,8.72e-10,55;CL:0000213,1.27e-09,58;CL:0000215,1.27e-09,58;CL:0000076,1.66e-09,63;CL:0000192,2.80e-09,43;CL:0000514,2.80e-09,43;CL:0000071,3.06e-09,18;CL:0002546,3.06e-09,18;CL:0002078,3.45e-09,45;CL:0000393,3.82e-08,61;CL:0000211,3.82e-08,61;CL:0000680,3.90e-08,58;CL:0000056,3.90e-08,58;CL:0000355,3.90e-08,58;CL:1000497,2.55e-07,17;CL:0002518,2.55e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;3.13e-09;18 | |||
|ontology_enrichment_disease=DOID:305!1.62e-08!106;DOID:0050687!6.37e-07!143 | |ontology_enrichment_disease=DOID:305!1.62e-08!106;DOID:0050687!6.37e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.77e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0003914!5.16e-22!118;UBERON:0000490!2.91e-19!138;UBERON:0002049!6.01e-19!79;UBERON:0007798!6.01e-19!79;UBERON:0003104!1.34e-17!238;UBERON:0009142!1.34e-17!238;UBERON:0001048!4.76e-16!168;UBERON:0002100!2.18e-15!216;UBERON:0000481!8.41e-15!347;UBERON:0000055!2.69e-14!69;UBERON:0004872!5.16e-14!84;UBERON:0004535!8.67e-14!110;UBERON:0000466!1.04e-13!126;UBERON:0000477!1.60e-13!286;UBERON:0001009!1.03e-12!113;UBERON:0000119!1.43e-12!312;UBERON:0004119!2.56e-12!169;UBERON:0000925!2.56e-12!169;UBERON:0006595!2.56e-12!169;UBERON:0000483!6.10e-12!309;UBERON:0005256!7.44e-12!143;UBERON:0001981!9.62e-12!60;UBERON:0007500!9.62e-12!60;UBERON:0004537!9.62e-12!60;UBERON:0006965!9.62e-12!60;UBERON:0005177!2.36e-11!107;UBERON:0004111!8.05e-11!241;UBERON:0000464!2.86e-10!104;UBERON:0001007!5.54e-10!155;UBERON:0001555!5.54e-10!155;UBERON:0007026!5.54e-10!155;UBERON:0004921!5.95e-10!129;UBERON:0004185!5.95e-10!129;UBERON:0009569!9.87e-10!113;UBERON:0000487!1.11e-09!22;UBERON:0001986!4.48e-09!18;UBERON:0004638!4.48e-09!18;UBERON:0004852!4.48e-09!18;UBERON:0000926!4.97e-09!448;UBERON:0004120!4.97e-09!448;UBERON:0006603!4.97e-09!448;UBERON:0006554!5.86e-09!44;UBERON:0000077!6.81e-09!130;UBERON:0000475!7.90e-09!365;UBERON:0001008!8.90e-09!45;UBERON:0005911!9.91e-09!82;UBERON:0000468!1.78e-08!659;UBERON:0001041!1.81e-08!98;UBERON:0001637!6.37e-08!42;UBERON:0003509!6.37e-08!42;UBERON:0004572!6.37e-08!42;UBERON:0005172!1.03e-07!55;UBERON:0005173!1.03e-07!55;UBERON:0002417!1.79e-07!61;UBERON:0000916!1.79e-07!61;UBERON:0000058!1.82e-07!26;UBERON:0002553!2.59e-07!70;UBERON:0006914!5.16e-07!25;UBERON:0000467!5.46e-07!625;UBERON:0003103!6.33e-07!69;UBERON:0000480!9.06e-07!626;UBERON:0000025!9.26e-07!194 | |ontology_enrichment_uberon=UBERON:0003914!5.16e-22!118;UBERON:0000490!2.91e-19!138;UBERON:0002049!6.01e-19!79;UBERON:0007798!6.01e-19!79;UBERON:0003104!1.34e-17!238;UBERON:0009142!1.34e-17!238;UBERON:0001048!4.76e-16!168;UBERON:0002100!2.18e-15!216;UBERON:0000481!8.41e-15!347;UBERON:0000055!2.69e-14!69;UBERON:0004872!5.16e-14!84;UBERON:0004535!8.67e-14!110;UBERON:0000466!1.04e-13!126;UBERON:0000477!1.60e-13!286;UBERON:0001009!1.03e-12!113;UBERON:0000119!1.43e-12!312;UBERON:0004119!2.56e-12!169;UBERON:0000925!2.56e-12!169;UBERON:0006595!2.56e-12!169;UBERON:0000483!6.10e-12!309;UBERON:0005256!7.44e-12!143;UBERON:0001981!9.62e-12!60;UBERON:0007500!9.62e-12!60;UBERON:0004537!9.62e-12!60;UBERON:0006965!9.62e-12!60;UBERON:0005177!2.36e-11!107;UBERON:0004111!8.05e-11!241;UBERON:0000464!2.86e-10!104;UBERON:0001007!5.54e-10!155;UBERON:0001555!5.54e-10!155;UBERON:0007026!5.54e-10!155;UBERON:0004921!5.95e-10!129;UBERON:0004185!5.95e-10!129;UBERON:0009569!9.87e-10!113;UBERON:0000487!1.11e-09!22;UBERON:0001986!4.48e-09!18;UBERON:0004638!4.48e-09!18;UBERON:0004852!4.48e-09!18;UBERON:0000926!4.97e-09!448;UBERON:0004120!4.97e-09!448;UBERON:0006603!4.97e-09!448;UBERON:0006554!5.86e-09!44;UBERON:0000077!6.81e-09!130;UBERON:0000475!7.90e-09!365;UBERON:0001008!8.90e-09!45;UBERON:0005911!9.91e-09!82;UBERON:0000468!1.78e-08!659;UBERON:0001041!1.81e-08!98;UBERON:0001637!6.37e-08!42;UBERON:0003509!6.37e-08!42;UBERON:0004572!6.37e-08!42;UBERON:0005172!1.03e-07!55;UBERON:0005173!1.03e-07!55;UBERON:0002417!1.79e-07!61;UBERON:0000916!1.79e-07!61;UBERON:0000058!1.82e-07!26;UBERON:0002553!2.59e-07!70;UBERON:0006914!5.16e-07!25;UBERON:0000467!5.46e-07!625;UBERON:0003103!6.33e-07!69;UBERON:0000480!9.06e-07!626;UBERON:0000025!9.26e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0000490;6.31e-10;33!UBERON:0000487;7.85e-10;22!UBERON:0004638;3.13e-09;18!UBERON:0001986;3.13e-09;18!UBERON:0004852;3.13e-09;18!UBERON:0002049;8.11e-09;75!UBERON:0007798;8.11e-09;75!UBERON:0003914;1.16e-08;74!UBERON:0000055;2.73e-08;65!UBERON:0007500;6.05e-08;56!UBERON:0001981;6.05e-08;56!UBERON:0004537;6.05e-08;56!UBERON:0006554;3.10e-07;30!UBERON:0001008;3.10e-07;30!UBERON:0006914;4.23e-07;25!UBERON:0000025;6.51e-07;93 | |||
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| ||
|short_description=p2@KRT8 | |short_description=p2@KRT8 | ||
}} | }} |
Latest revision as of 01:13, 19 September 2015
Short description: | p2@KRT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KRT8_5end |
Coexpression cluster: | C3291_large_Fibroblast_Mesenchymal_anaplastic_Renal_cervical_Pericytes |
Association with transcript: | 0bp_to_ENST00000546826, ENST00000552877_5end |
EntrezGene: | KRT8 |
HGNC: | 6446 |
UniProt: | F8VUG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.26e-30 | 253 |
embryonic cell | 1.03e-18 | 250 |
mesodermal cell | 8.86e-18 | 121 |
endothelial cell of vascular tree | 1.08e-11 | 24 |
endothelial cell | 2.41e-11 | 36 |
muscle cell | 8.72e-10 | 55 |
lining cell | 1.27e-09 | 58 |
barrier cell | 1.27e-09 | 58 |
squamous epithelial cell | 1.66e-09 | 63 |
smooth muscle cell | 2.80e-09 | 43 |
smooth muscle myoblast | 2.80e-09 | 43 |
blood vessel endothelial cell | 3.06e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.06e-09 | 18 |
meso-epithelial cell | 3.45e-09 | 45 |
electrically responsive cell | 3.82e-08 | 61 |
electrically active cell | 3.82e-08 | 61 |
muscle precursor cell | 3.90e-08 | 58 |
myoblast | 3.90e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.90e-08 | 58 |
kidney cell | 2.55e-07 | 17 |
kidney epithelial cell | 2.55e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.77e-08 | 106 |