FFCP PHASE1:Hg19::chr6:32731284..32731295,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3120 | |EntrezGene=3120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4945 | |HGNC=4945 | ||
|TSSclassifier=strong | |||
|UniProt=A2ADX3 | |UniProt=A2ADX3 | ||
|association_with_transcript=13bp_to_ENST00000435145_5end | |association_with_transcript=13bp_to_ENST00000435145_5end | ||
|cluster_id=chr6:32731284..32731295,- | |||
|coexpression_cluster_id=C80 | |coexpression_cluster_id=C80 | ||
|description=CAGE_peak_2_at_HLA-DQB2_5end | |description=CAGE_peak_2_at_HLA-DQB2_5end | ||
|id=chr6:32731284..32731295,- | |id=chr6:32731284..32731295,- | ||
|ontology_enrichment_celltype=CL:0000453!1.10e-41!5;CL:0000990!3.83e-23!8;CL:0000451!6.46e-19!10;CL:0001014!7.07e-18!2;CL:0001016!7.07e-18!2 | |ontology_enrichment_celltype=CL:0000453!1.10e-41!5;CL:0000990!3.83e-23!8;CL:0000451!6.46e-19!10;CL:0001014!7.07e-18!2;CL:0001016!7.07e-18!2 | ||
|ontology_enrichment_celltype_v019=CL:0000453;2.28e-123;5!CL:0000990;7.50e-69;8!CL:0000451;1.91e-56;10!CL:0001014;8.82e-51;2!CL:0001016;8.82e-51;2!CL:0000840;1.03e-17;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.28e-123,5;CL:0000990,7.50e-69,8;CL:0000451,1.91e-56,10;CL:0001014,8.82e-51,2;CL:0001016,8.82e-51,2;CL:0000840,1.03e-17,5;CL:0001029,1.03e-17,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001042!3.14e-13!10;UBERON:0009145!3.14e-13!10;UBERON:0006562!4.82e-12!11;UBERON:0004177!6.08e-11!7;UBERON:0002372!1.32e-09!1;UBERON:0001961!1.32e-09!1;UBERON:0001744!1.32e-09!1;UBERON:0001735!1.32e-09!1;UBERON:0001736!1.99e-09!1;UBERON:0006298!1.99e-09!1;UBERON:0002171!2.16e-09!1;UBERON:0006518!2.16e-09!1;UBERON:0008949!2.16e-09!1;UBERON:0000101!2.16e-09!1;UBERON:0002167!2.16e-09!1;UBERON:0007023!2.23e-09!115;UBERON:0002370!3.40e-09!4;UBERON:0005058!3.40e-09!4;UBERON:0009113!3.40e-09!4;UBERON:0003295!3.40e-09!4;UBERON:0005562!3.40e-09!4;UBERON:0001301!4.15e-09!1;UBERON:0002336!5.28e-09!1;UBERON:0001018!5.28e-09!1;UBERON:0002473!5.28e-09!1;UBERON:0005340!5.28e-09!1;UBERON:0002316!5.28e-09!1;UBERON:0003544!5.28e-09!1;UBERON:0001020!5.28e-09!1;UBERON:0005970!5.28e-09!1;UBERON:0002437!5.28e-09!1;UBERON:0000974!6.00e-08!10;UBERON:0003408!6.44e-08!10;UBERON:0001557!5.01e-07!19 | |ontology_enrichment_uberon=UBERON:0001042!3.14e-13!10;UBERON:0009145!3.14e-13!10;UBERON:0006562!4.82e-12!11;UBERON:0004177!6.08e-11!7;UBERON:0002372!1.32e-09!1;UBERON:0001961!1.32e-09!1;UBERON:0001744!1.32e-09!1;UBERON:0001735!1.32e-09!1;UBERON:0001736!1.99e-09!1;UBERON:0006298!1.99e-09!1;UBERON:0002171!2.16e-09!1;UBERON:0006518!2.16e-09!1;UBERON:0008949!2.16e-09!1;UBERON:0000101!2.16e-09!1;UBERON:0002167!2.16e-09!1;UBERON:0007023!2.23e-09!115;UBERON:0002370!3.40e-09!4;UBERON:0005058!3.40e-09!4;UBERON:0009113!3.40e-09!4;UBERON:0003295!3.40e-09!4;UBERON:0005562!3.40e-09!4;UBERON:0001301!4.15e-09!1;UBERON:0002336!5.28e-09!1;UBERON:0001018!5.28e-09!1;UBERON:0002473!5.28e-09!1;UBERON:0005340!5.28e-09!1;UBERON:0002316!5.28e-09!1;UBERON:0003544!5.28e-09!1;UBERON:0001020!5.28e-09!1;UBERON:0005970!5.28e-09!1;UBERON:0002437!5.28e-09!1;UBERON:0000974!6.00e-08!10;UBERON:0003408!6.44e-08!10;UBERON:0001557!5.01e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.24e-49;2!UBERON:0005058;1.24e-49;2!UBERON:0009113;1.24e-49;2!UBERON:0002372;1.11e-25;1!UBERON:0001961;1.11e-25;1!UBERON:0001744;1.11e-25;1!UBERON:0001042;1.11e-25;1!UBERON:0001735;1.11e-25;1!UBERON:0004177;1.41e-20;5!UBERON:0005057;1.41e-20;5!UBERON:0006562;1.46e-13;2!UBERON:0002405;7.33e-09;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,9.79e-26,1;UBERON:0001961,9.79e-26,1;UBERON:0001744,9.79e-26,1;UBERON:0001735,9.79e-26,1;UBERON:0002370,2.08e-25,4;UBERON:0005058,2.08e-25,4;UBERON:0009113,2.08e-25,4;UBERON:0003295,2.08e-25,4;UBERON:0005562,2.08e-25,4;UBERON:0001042,1.08e-22,10;UBERON:0009145,1.08e-22,10;UBERON:0006562,1.05e-20,11;UBERON:0003351,2.58e-17,6;UBERON:0004177,5.41e-15,7;UBERON:0005057,5.41e-15,7;UBERON:0001557,2.62e-12,19;UBERON:0000974,8.47e-11,10;UBERON:0003408,8.47e-11,10;UBERON:0009722,6.63e-10,11;UBERON:0007690,6.63e-10,11;UBERON:0002405,8.34e-07,93 | |||
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|short_description=p2@HLA-DQB2 | |short_description=p2@HLA-DQB2 | ||
}} | }} |
Latest revision as of 03:55, 18 September 2015
Short description: | p2@HLA-DQB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HLA-DQB2_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 13bp_to_ENST00000435145_5end |
EntrezGene: | HLA-DQB2 |
HGNC: | 4945 |
UniProt: | A2ADX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.28e-123 | 5 |
conventional dendritic cell | 7.50e-69 | 8 |
dendritic cell | 1.91e-56 | 10 |
CD1a-positive Langerhans cell | 8.82e-51 | 2 |
immature CD1a-positive Langerhans cell | 8.82e-51 | 2 |
immature conventional dendritic cell | 1.03e-17 | 5 |
common dendritic progenitor | 1.03e-17 | 5 |
Ontology term | p-value | n |
---|---|---|
tonsil | 9.79e-26 | 1 |
mucosa-associated lymphoid tissue | 9.79e-26 | 1 |
lymphoid tissue | 9.79e-26 | 1 |
tonsillar ring | 9.79e-26 | 1 |
thymus | 2.08e-25 | 4 |
hemolymphoid system gland | 2.08e-25 | 4 |
thymic region | 2.08e-25 | 4 |
pharyngeal gland | 2.08e-25 | 4 |
thymus primordium | 2.08e-25 | 4 |
chordate pharynx | 1.08e-22 | 10 |
pharyngeal region of foregut | 1.08e-22 | 10 |
pharynx | 1.05e-20 | 11 |
pharyngeal epithelium | 2.58e-17 | 6 |
hemopoietic organ | 5.41e-15 | 7 |
immune organ | 5.41e-15 | 7 |
upper respiratory tract | 2.62e-12 | 19 |
neck | 8.47e-11 | 10 |
gland of gut | 8.47e-11 | 10 |
entire pharyngeal arch endoderm | 6.63e-10 | 11 |
early pharyngeal endoderm | 6.63e-10 | 11 |
immune system | 8.34e-07 | 93 |