FFCP PHASE1:Hg19::chr4:1161154..1161170,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:1161154..1161170,- | |||
|coexpression_cluster_id=C574 | |coexpression_cluster_id=C574 | ||
|description=CAGE_peak_at_chr4:1161154..1161170,- | |description=CAGE_peak_at_chr4:1161154..1161170,- | ||
|id=chr4:1161154..1161170,- | |id=chr4:1161154..1161170,- | ||
|ontology_enrichment_celltype=CL:0000723!1.73e-12!436;CL:0000048!1.83e-12!430;CL:0000034!7.78e-12!444;CL:0000057!5.04e-11!75;CL:0000055!5.30e-09!180;CL:0000136!1.77e-08!15;CL:0002334!1.86e-08!12;CL:0002570!1.33e-07!8;CL:0002320!1.82e-07!365;CL:0002371!2.45e-07!591;CL:0000134!4.88e-07!358;CL:0000680!7.24e-07!57;CL:0000056!7.24e-07!57;CL:0000355!7.24e-07!57 | |ontology_enrichment_celltype=CL:0000723!1.73e-12!436;CL:0000048!1.83e-12!430;CL:0000034!7.78e-12!444;CL:0000057!5.04e-11!75;CL:0000055!5.30e-09!180;CL:0000136!1.77e-08!15;CL:0002334!1.86e-08!12;CL:0002570!1.33e-07!8;CL:0002320!1.82e-07!365;CL:0002371!2.45e-07!591;CL:0000134!4.88e-07!358;CL:0000680!7.24e-07!57;CL:0000056!7.24e-07!57;CL:0000355!7.24e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002600;6.52e-16;2!CL:0002615;3.27e-11;3!CL:0002622;3.27e-11;3!CL:0002504;6.44e-11;3!CL:1000279;6.44e-11;3!CL:1000280;6.44e-11;3!CL:0000135;1.32e-10;3!CL:0000388;1.32e-10;3!CL:0002599;1.42e-08;1!CL:0000192;2.46e-07;43!CL:0002537;5.24e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002600,4.65e-16,2;CL:0002622,2.81e-11,3;CL:0002615,3.11e-11,3;CL:0002504,4.66e-11,3;CL:1000279,4.66e-11,3;CL:1000280,4.66e-11,3;CL:0000135,1.95e-10,3;CL:0000388,1.95e-10,3;CL:0000192,5.35e-10,43;CL:0000514,5.35e-10,43;CL:0002599,1.65e-08,1;CL:0000187,1.41e-07,55;CL:0000680,3.94e-07,58;CL:0000056,3.94e-07,58;CL:0000355,3.94e-07,58;CL:0002537,5.91e-07,5;CL:0000393,1.00e-06,61;CL:0000211,1.00e-06,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.46e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!1.43e-08!14 | |ontology_enrichment_disease=DOID:2394!1.43e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!6.71e-08!6;UBERON:0002358!6.71e-08!6;UBERON:0003684!6.71e-08!6;UBERON:0001178!6.71e-08!6;UBERON:0004290!1.27e-07!70;UBERON:0002384!3.23e-07!375;UBERON:0001013!4.42e-07!14;UBERON:0002100!5.25e-07!216;UBERON:0000914!6.40e-07!83;UBERON:0002329!6.40e-07!83;UBERON:0003077!6.40e-07!83;UBERON:0003059!6.40e-07!83;UBERON:0007282!6.40e-07!83;UBERON:0009618!6.40e-07!83;UBERON:0007285!6.40e-07!83 | |ontology_enrichment_uberon=UBERON:0003688!6.71e-08!6;UBERON:0002358!6.71e-08!6;UBERON:0003684!6.71e-08!6;UBERON:0001178!6.71e-08!6;UBERON:0004290!1.27e-07!70;UBERON:0002384!3.23e-07!375;UBERON:0001013!4.42e-07!14;UBERON:0002100!5.25e-07!216;UBERON:0000914!6.40e-07!83;UBERON:0002329!6.40e-07!83;UBERON:0003077!6.40e-07!83;UBERON:0003059!6.40e-07!83;UBERON:0007282!6.40e-07!83;UBERON:0009618!6.40e-07!83;UBERON:0007285!6.40e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.32e-10;3!UBERON:0000043;1.32e-10;3!UBERON:0007845;1.32e-10;3!UBERON:0002367;8.20e-07;11!UBERON:0010147;8.20e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.95e-10,3;UBERON:0000043,1.95e-10,3;UBERON:0007845,1.95e-10,3;UBERON:0002329,4.19e-07,71;UBERON:0003059,4.19e-07,71;UBERON:0007282,4.19e-07,71;UBERON:0004290,4.19e-07,71;UBERON:0009618,4.19e-07,71;UBERON:0003077,5.49e-07,72;UBERON:0007285,5.49e-07,72;UBERON:0007524,7.14e-07,73;UBERON:0002367,7.50e-07,11;UBERON:0010147,7.50e-07,11;UBERON:0009846,7.50e-07,11;UBERON:0003353,7.50e-07,11;UBERON:0004902,7.50e-07,11;UBERON:0003820,7.50e-07,11;UBERON:0009847,7.50e-07,11 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.281908808191942,6.00439790118782,2.68176656656373,0,2.53299878168311,0,0.522371256399677,0.245733936501509,0,0,0,0.618831764800233,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,1.5608003841516,0,0.747243402759005,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0.494533858557114,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0,0,0.600182192168805,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,7.15312891703765,0,2.12750493267896,3.12022310734098,0,0,0,0.285955987316295,5.96883765930587,0,0,0.710783897485092,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0.646882724578552,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0.744323423456331,0,1.12264037773229,0.512556597022804,0,0.965123526861645,0,0.616838775210622,0.532685175939381,0.164254312027618,0,0.581051892299796,0,0,0,0.34444334449382,2.91345868810747,6.03172308813351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0.137836572484531,0.644521469209642,0.435050081742686,0.255679882248303,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5250415513906,0.767693373934002,1.71175595213568,0,0,0.359744915166629,3.29444435683266,1.7671860351853,0,0,0,1.46290121726877,0,0,0.136499911407986,3.95935209470396,0,0,0,0,1.73632660280006,3.27947376023316,0,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0.329294892959902,0,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.701139929541673,0.554805861502613,0,0.251567901752575,0,0,0.453692771289717,0,0,0.159296767163702,0.449803112163605,0,0,0.265841714557995,1.5652351854352,0.300515217994437,1.52322084867518,0,0.363697318405119,0,0.928067519756987,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4499638188256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0.874238242015829,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,1.11598505450025,1.38652688589425,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0.665320713092027,0,0,0,0,0,0,0.406896178315738,0,0,0 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|phase1_expression=0.726713517082227,0.856402095563933,0.281908808191942,6.00439790118782,2.68176656656373,0,2.53299878168311,0,0.522371256399677,0.245733936501509,0,0,0,0.618831764800233,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,1.5608003841516,0,0.747243402759005,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0.494533858557114,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0,0,0.600182192168805,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,7.15312891703765,0,2.12750493267896,3.12022310734098,0,0,0,0.285955987316295,5.96883765930587,0,0,0.710783897485092,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0.646882724578552,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0.744323423456331,0,1.12264037773229,0.512556597022804,0,0.965123526861645,0,0.616838775210622,0.532685175939381,0.164254312027618,0,0.581051892299796,0,0,0,0.34444334449382,2.91345868810747,6.03172308813351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0.137836572484531,0.644521469209642,0.435050081742686,0.255679882248303,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5250415513906,0.767693373934002,1.71175595213568,0,0,0.359744915166629,3.29444435683266,1.7671860351853,0,0,0,1.46290121726877,0,0,0.136499911407986,3.95935209470396,0,0,0,0,1.73632660280006,3.27947376023316,0,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0.329294892959902,0,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.701139929541673,0.554805861502613,0,0.251567901752575,0,0,0.453692771289717,0,0,0.159296767163702,0.449803112163605,0,0,0.265841714557995,1.5652351854352,0.300515217994437,1.52322084867518,0,0.363697318405119,0,0.928067519756987,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4499638188256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0.874238242015829,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,1.11598505450025,1.38652688589425,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0.665320713092027,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr4:1161154..1161170,- | |short_description=p@chr4:1161154..1161170,- | ||
}} | }} |
Latest revision as of 01:09, 30 July 2015
Short description: | p@chr4:1161154..1161170, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:1161154..1161170, - |
Coexpression cluster: | C574_Mesenchymal_Fibroblast_Smooth_Prostate_Adipocyte_Hair_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 4.65e-16 | 2 |
prostate stromal cell | 2.81e-11 | 3 |
adipocyte of omentum tissue | 3.11e-11 | 3 |
enteric smooth muscle cell | 4.66e-11 | 3 |
smooth muscle cell of large intestine | 4.66e-11 | 3 |
smooth muscle cell of colon | 4.66e-11 | 3 |
fibrocyte | 1.95e-10 | 3 |
tendon cell | 1.95e-10 | 3 |
smooth muscle cell | 5.35e-10 | 43 |
smooth muscle myoblast | 5.35e-10 | 43 |
smooth muscle cell of the esophagus | 1.65e-08 | 1 |
muscle cell | 1.41e-07 | 55 |
muscle precursor cell | 3.94e-07 | 58 |
myoblast | 3.94e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.94e-07 | 58 |
amnion mesenchymal stem cell | 5.91e-07 | 5 |
electrically responsive cell | 1.00e-06 | 61 |
electrically active cell | 1.00e-06 | 61 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.95e-10 | 3 |
tendon | 1.95e-10 | 3 |
regular connective tissue | 1.95e-10 | 3 |
somite | 4.19e-07 | 71 |
presomitic mesoderm | 4.19e-07 | 71 |
presumptive segmental plate | 4.19e-07 | 71 |
dermomyotome | 4.19e-07 | 71 |
trunk paraxial mesoderm | 4.19e-07 | 71 |
paraxial mesoderm | 5.49e-07 | 72 |
presumptive paraxial mesoderm | 5.49e-07 | 72 |
dense mesenchyme tissue | 7.14e-07 | 73 |
prostate gland | 7.50e-07 | 11 |
male accessory sex gland | 7.50e-07 | 11 |
embryonic cloacal epithelium | 7.50e-07 | 11 |
epithelium of hindgut | 7.50e-07 | 11 |
urogenital sinus epithelium | 7.50e-07 | 11 |
prostate bud | 7.50e-07 | 11 |
prostate field | 7.50e-07 | 11 |