FFCP PHASE1:Hg19::chr12:20963632..20963645,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28234 | |EntrezGene=28234 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10961 | |HGNC=10961 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPD5,F5H8K0 | |UniProt=Q9NPD5,F5H8K0 | ||
|association_with_transcript=0bp_to_ENST00000261196,ENST00000540853,NM_019844,uc001rek.2,uc001rel.2_5end | |association_with_transcript=0bp_to_ENST00000261196,ENST00000540853,NM_019844,uc001rek.2,uc001rel.2_5end | ||
|cluster_id=chr12:20963632..20963645,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_SLCO1B3_5end | |description=CAGE_peak_1_at_SLCO1B3_5end | ||
|id=chr12:20963632..20963645,+ | |id=chr12:20963632..20963645,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.99e-14!12;CL:0000417!1.99e-14!12;CL:0000668!1.99e-14!12;CL:0000414!1.99e-14!12;CL:0000412!1.99e-14!12;CL:0000182!1.99e-14!12 | |ontology_enrichment_celltype=CL:0000181!1.99e-14!12;CL:0000417!1.99e-14!12;CL:0000668!1.99e-14!12;CL:0000414!1.99e-14!12;CL:0000412!1.99e-14!12;CL:0000182!1.99e-14!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.29e-15;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.29e-15,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.76e-08;11!UBERON:0009497;4.95e-07;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.08e-20!19;UBERON:0006925!9.08e-20!19;UBERON:0008836!9.08e-20!19;UBERON:0005057!2.81e-19!26;UBERON:0008835!5.00e-17!22;UBERON:0003894!5.00e-17!22;UBERON:0009854!2.84e-16!23;UBERON:0007499!6.08e-15!25;UBERON:0009497!6.08e-15!25;UBERON:0000015!6.08e-15!25;UBERON:0002423!6.08e-15!25;UBERON:0006235!6.08e-15!25;UBERON:0004161!6.08e-15!25;UBERON:0009856!2.36e-14!26;UBERON:0002365!5.61e-12!31;UBERON:0002330!5.61e-12!31;UBERON:0007190!1.81e-11!1;UBERON:0002368!1.46e-10!35;UBERON:0003929!5.64e-09!54;UBERON:0005172!9.11e-09!55;UBERON:0005173!9.11e-09!55;UBERON:0000949!4.03e-08!45;UBERON:0002417!7.78e-08!61;UBERON:0000916!7.78e-08!61;UBERON:0001041!1.56e-07!98;UBERON:0005911!2.39e-07!82;UBERON:0005177!8.46e-07!107 | |ontology_enrichment_uberon=UBERON:0002107!9.08e-20!19;UBERON:0006925!9.08e-20!19;UBERON:0008836!9.08e-20!19;UBERON:0005057!2.81e-19!26;UBERON:0008835!5.00e-17!22;UBERON:0003894!5.00e-17!22;UBERON:0009854!2.84e-16!23;UBERON:0007499!6.08e-15!25;UBERON:0009497!6.08e-15!25;UBERON:0000015!6.08e-15!25;UBERON:0002423!6.08e-15!25;UBERON:0006235!6.08e-15!25;UBERON:0004161!6.08e-15!25;UBERON:0009856!2.36e-14!26;UBERON:0002365!5.61e-12!31;UBERON:0002330!5.61e-12!31;UBERON:0007190!1.81e-11!1;UBERON:0002368!1.46e-10!35;UBERON:0003929!5.64e-09!54;UBERON:0005172!9.11e-09!55;UBERON:0005173!9.11e-09!55;UBERON:0000949!4.03e-08!45;UBERON:0002417!7.78e-08!61;UBERON:0000916!7.78e-08!61;UBERON:0001041!1.56e-07!98;UBERON:0005911!2.39e-07!82;UBERON:0005177!8.46e-07!107 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.36e-26;19!UBERON:0006925;3.36e-26;19!UBERON:0002423;5.61e-20;25!UBERON:0002365;4.06e-16;31!UBERON:0002330;4.06e-16;31!UBERON:0002368;5.84e-14;33!UBERON:0000949;3.45e-10;43!UBERON:0005172;2.06e-07;52!UBERON:0005173;2.06e-07;52!UBERON:0001007;2.69e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.36e-26,19;UBERON:0006925,3.36e-26,19;UBERON:0008836,3.36e-26,19;UBERON:0008835,1.15e-22,22;UBERON:0003894,1.15e-22,22;UBERON:0009854,1.08e-21,23;UBERON:0007499,5.61e-20,25;UBERON:0009497,5.61e-20,25;UBERON:0000015,5.61e-20,25;UBERON:0002423,5.61e-20,25;UBERON:0006235,5.61e-20,25;UBERON:0004161,5.61e-20,25;UBERON:0009856,3.22e-19,26;UBERON:0002365,3.74e-16,31;UBERON:0002330,3.74e-16,31;UBERON:0002368,2.50e-14,35;UBERON:0003929,3.80e-13,54;UBERON:0005911,1.38e-11,82;UBERON:0000949,3.55e-11,45;UBERON:0005172,2.49e-09,54;UBERON:0005173,2.49e-09,54;UBERON:0002530,1.51e-08,59;UBERON:0002417,2.10e-08,60;UBERON:0000916,2.10e-08,60;UBERON:0001041,4.10e-08,87;UBERON:0004921,6.83e-08,118;UBERON:0005177,5.76e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3510069643662,72.7292140341443,90.9816456289362,0,5.28850285735388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,163.835208519878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,164.84579516014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81599647657131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.0691917530686,5.30027555648885,0,0,1.53978154095896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3510069643662,72.7292140341443,90.9816456289362,0,5.28850285735388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,163.835208519878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,164.84579516014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81599647657131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.0691917530686,5.30027555648885,0,0,1.53978154095896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@SLCO1B3 | |short_description=p1@SLCO1B3 | ||
}} | }} |
Latest revision as of 19:10, 17 September 2015
Short description: | p1@SLCO1B3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLCO1B3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000261196, ENST00000540853, NM_019844, uc001rek.2, uc001rel.2_5end |
EntrezGene: | SLCO1B3 |
HGNC: | 10961 |
UniProt: | Q9NPD5F5H8K0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.29e-15 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.36e-26 | 19 |
digestive gland | 3.36e-26 | 19 |
liver bud | 3.36e-26 | 19 |
hepatic diverticulum | 1.15e-22 | 22 |
liver primordium | 1.15e-22 | 22 |
digestive tract diverticulum | 1.08e-21 | 23 |
epithelial sac | 5.61e-20 | 25 |
epithelium of foregut-midgut junction | 5.61e-20 | 25 |
anatomical boundary | 5.61e-20 | 25 |
hepatobiliary system | 5.61e-20 | 25 |
foregut-midgut junction | 5.61e-20 | 25 |
septum transversum | 5.61e-20 | 25 |
sac | 3.22e-19 | 26 |
exocrine gland | 3.74e-16 | 31 |
exocrine system | 3.74e-16 | 31 |
endocrine gland | 2.50e-14 | 35 |
gut epithelium | 3.80e-13 | 54 |
endo-epithelium | 1.38e-11 | 82 |
endocrine system | 3.55e-11 | 45 |
abdomen element | 2.49e-09 | 54 |
abdominal segment element | 2.49e-09 | 54 |
gland | 1.51e-08 | 59 |
abdominal segment of trunk | 2.10e-08 | 60 |
abdomen | 2.10e-08 | 60 |
foregut | 4.10e-08 | 87 |
subdivision of digestive tract | 6.83e-08 | 118 |
trunk region element | 5.76e-07 | 101 |