FFCP PHASE1:Hg19::chr12:120315074..120315097,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11113 | |EntrezGene=11113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1985 | |HGNC=1985 | ||
|TSSclassifier=strong | |||
|UniProt=O14578,Q2M5E1 | |UniProt=O14578,Q2M5E1 | ||
|association_with_transcript=0bp_to_ENST00000261833,ENST00000392521,NM_001206999,NM_007174,uc001txi.1,uc001txj.1_5end | |association_with_transcript=0bp_to_ENST00000261833,ENST00000392521,NM_001206999,NM_007174,uc001txi.1,uc001txj.1_5end | ||
|cluster_id=chr12:120315074..120315097,- | |||
|description=CAGE_peak_3_at_CIT_5end | |description=CAGE_peak_3_at_CIT_5end | ||
|id=chr12:120315074..120315097,- | |id=chr12:120315074..120315097,- | ||
|ontology_enrichment_celltype=CL:0000066!3.27e-16!254;CL:0000548!1.81e-15!679;CL:0000004!1.81e-15!679;CL:0000255!1.81e-15!679;CL:0000012!6.71e-15!682;CL:0000055!1.39e-14!180;CL:0000333!8.58e-13!41;CL:0002321!4.80e-11!248;CL:0000133!1.36e-10!59;CL:0000220!2.04e-10!246;CL:0000221!1.09e-08!71;CL:0000003!4.15e-08!722;CL:0000095!8.20e-08!17;CL:0000123!8.20e-08!17;CL:0002319!1.30e-07!25;CL:0000057!1.82e-07!75;CL:0000148!2.47e-07!10;CL:0000541!2.47e-07!10;CL:0002620!2.91e-07!23;CL:0000063!4.91e-07!578 | |ontology_enrichment_celltype=CL:0000066!3.27e-16!254;CL:0000548!1.81e-15!679;CL:0000004!1.81e-15!679;CL:0000255!1.81e-15!679;CL:0000012!6.71e-15!682;CL:0000055!1.39e-14!180;CL:0000333!8.58e-13!41;CL:0002321!4.80e-11!248;CL:0000133!1.36e-10!59;CL:0000220!2.04e-10!246;CL:0000221!1.09e-08!71;CL:0000003!4.15e-08!722;CL:0000095!8.20e-08!17;CL:0000123!8.20e-08!17;CL:0002319!1.30e-07!25;CL:0000057!1.82e-07!75;CL:0000148!2.47e-07!10;CL:0000541!2.47e-07!10;CL:0002620!2.91e-07!23;CL:0000063!4.91e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000095;3.61e-08;17!CL:0002319;3.93e-08;25!CL:0000148;6.29e-08;10!CL:0000243;5.90e-07;15!CL:0000125;5.90e-07;15!CL:0002620;6.23e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.04e-13,41;CL:0000066,1.64e-12,253;CL:0000133,2.23e-11,59;CL:0000221,1.87e-08,72;CL:0002319,4.18e-08,25;CL:0000095,4.36e-08,17;CL:0000123,4.36e-08,17;CL:0002321,4.36e-08,250;CL:0000148,6.48e-08,10;CL:0000541,6.48e-08,10;CL:0000057,4.89e-07,76;CL:0000243,7.08e-07,15;CL:0000125,7.08e-07,15;CL:0000030,7.08e-07,15;CL:0000339,7.08e-07,15;CL:0002620,8.35e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000339;5.90e-07;15 | |||
|ontology_enrichment_disease=DOID:14566!4.74e-34!239;DOID:162!1.03e-33!235;DOID:0050687!1.37e-19!143;DOID:305!3.15e-15!106;DOID:0050686!5.79e-15!137;DOID:2531!1.19e-09!51;DOID:0060083!1.19e-09!51;DOID:1240!1.81e-07!39 | |ontology_enrichment_disease=DOID:14566!4.74e-34!239;DOID:162!1.03e-33!235;DOID:0050687!1.37e-19!143;DOID:305!3.15e-15!106;DOID:0050686!5.79e-15!137;DOID:2531!1.19e-09!51;DOID:0060083!1.19e-09!51;DOID:1240!1.81e-07!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.23e-32,239;DOID:162,6.66e-32,235;DOID:0050687,2.07e-18,143;DOID:305,7.60e-14,106;DOID:0050686,1.38e-13,137;DOID:2531,6.52e-10,51;DOID:0060083,6.52e-10,51;DOID:1240,1.58e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002097!4.82e-08!40 | |ontology_enrichment_uberon=UBERON:0002097!4.82e-08!40 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,5.98e-07,41 | |||
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| ||
|short_description=p3@CIT | |short_description=p3@CIT | ||
}} | }} |
Latest revision as of 19:03, 16 September 2015
Short description: | p3@CIT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CIT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000261833, ENST00000392521, NM_001206999, NM_007174, uc001txi.1, uc001txj.1_5end |
EntrezGene: | CIT |
HGNC: | 1985 |
UniProt: | O14578Q2M5E1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.04e-13 | 41 |
epithelial cell | 1.64e-12 | 253 |
neurectodermal cell | 2.23e-11 | 59 |
ectodermal cell | 1.87e-08 | 72 |
neural cell | 4.18e-08 | 25 |
neuron associated cell | 4.36e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 4.36e-08 | 17 |
embryonic cell | 4.36e-08 | 250 |
melanocyte | 6.48e-08 | 10 |
melanoblast | 6.48e-08 | 10 |
fibroblast | 4.89e-07 | 76 |
glial cell (sensu Vertebrata) | 7.08e-07 | 15 |
glial cell | 7.08e-07 | 15 |
glioblast | 7.08e-07 | 15 |
glioblast (sensu Vertebrata) | 7.08e-07 | 15 |
skin fibroblast | 8.35e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
skin of body | 5.98e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.23e-32 | 239 |
cancer | 6.66e-32 | 235 |
cell type cancer | 2.07e-18 | 143 |
carcinoma | 7.60e-14 | 106 |
organ system cancer | 1.38e-13 | 137 |
hematologic cancer | 6.52e-10 | 51 |
immune system cancer | 6.52e-10 | 51 |
leukemia | 1.58e-07 | 39 |