FFCP PHASE1:Hg19::chr1:160924595..160924607,-: Difference between revisions
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|id=chr1:160924595..160924607,-
|short_description=p1@ITLN2
|description=CAGE_peak_1_at_ITLN2_5end
|association_with_transcript=-6bp_to_ENST00000368029,NM_080878,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=142683 | |EntrezGene=142683 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20599 | |HGNC=20599 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WWU7 | |UniProt=Q8WWU7 | ||
|association_with_transcript=-6bp_to_ENST00000368029,NM_080878,uc001fxd.2,uc009wts.2,uc010pju.1_5end | |||
|cluster_id=chr1:160924595..160924607,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_ITLN2_5end | |||
|id=chr1:160924595..160924607,- | |||
|ontology_enrichment_celltype=CL:0002322!1.53e-26!5;CL:0000039!1.04e-19!7;CL:0000586!1.04e-19!7;CL:0000167!4.87e-10!1;CL:0000164!4.87e-10!1;CL:0000502!4.87e-10!1;CL:0000172!4.87e-10!1;CL:0000173!4.87e-10!1;CL:0002351!4.87e-10!1;CL:0000148!5.78e-08!10;CL:0000541!5.78e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.02e-37;7!CL:0000586;1.02e-37;7!CL:0000167;4.44e-18;1!CL:0000164;4.44e-18;1!CL:0000502;4.44e-18;1!CL:0000172;4.44e-18;1!CL:0000173;4.44e-18;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.69e-38,7;CL:0000586,9.69e-38,7;CL:0000167,4.44e-18,1;CL:0000164,4.44e-18,1;CL:0000502,4.44e-18,1;CL:0000172,4.44e-18,1;CL:0000173,4.44e-18,1;CL:0002351,4.44e-18,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.46e-26;10!UBERON:0005564;1.46e-26;10!CL:0002351;4.44e-18;1 | |||
|ontology_enrichment_disease=DOID:3095!2.20e-13!22;DOID:2994!2.20e-13!22;DOID:4430!4.87e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;8.58e-19;22!DOID:2994;8.58e-19;22!DOID:4430;4.44e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,8.42e-19,22;DOID:2994,8.42e-19,22;DOID:4430,4.44e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.82e-17!8;UBERON:0003135!1.27e-12!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.49e-33;8!UBERON:0003135;3.42e-24;11!UBERON:0002108;2.58e-14;4!UBERON:0000991;7.30e-13;21!UBERON:0003101;2.71e-12;22!UBERON:0000079;2.71e-12;22!UBERON:0000922;5.45e-12;49!UBERON:0000160;5.38e-09;17!UBERON:0005409;3.71e-07;22!UBERON:0002114;9.12e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.31e-33,8;UBERON:0003135,3.32e-24,11;UBERON:0002108,2.58e-14,4;UBERON:0000991,7.18e-13,21;UBERON:0009196,7.18e-13,21;UBERON:0009117,7.18e-13,21;UBERON:0005564,7.18e-13,21;UBERON:0004176,2.67e-12,22;UBERON:0003101,2.67e-12,22;UBERON:0000079,2.67e-12,22;UBERON:0000160,5.38e-09,17;UBERON:0002114,9.12e-07,2 | |||
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|short_description=p1@ITLN2 | |||
}} | }} |
Latest revision as of 04:06, 18 September 2015
Short description: | p1@ITLN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ITLN2_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -6bp_to_ENST00000368029, NM_080878, uc001fxd.2, uc009wts.2, uc010pju.1_5end |
EntrezGene: | ITLN2 |
HGNC: | 20599 |
UniProt: | Q8WWU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.69e-38 | 7 |
germ cell | 9.69e-38 | 7 |
peptide hormone secreting cell | 4.44e-18 | 1 |
enteroendocrine cell | 4.44e-18 | 1 |
type D enteroendocrine cell | 4.44e-18 | 1 |
somatostatin secreting cell | 4.44e-18 | 1 |
pancreatic D cell | 4.44e-18 | 1 |
progenitor cell of endocrine pancreas | 4.44e-18 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 4.31e-33 | 8 |
male reproductive organ | 3.32e-24 | 11 |
small intestine | 2.58e-14 | 4 |
gonad | 7.18e-13 | 21 |
indifferent external genitalia | 7.18e-13 | 21 |
indifferent gonad | 7.18e-13 | 21 |
gonad primordium | 7.18e-13 | 21 |
external genitalia | 2.67e-12 | 22 |
male organism | 2.67e-12 | 22 |
male reproductive system | 2.67e-12 | 22 |
intestine | 5.38e-09 | 17 |
duodenum | 9.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.42e-19 | 22 |
germ cell cancer | 8.42e-19 | 22 |
somatostatinoma | 4.44e-18 | 1 |