FFCP PHASE1:Hg19::chr2:201242740..201242755,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26010 | |EntrezGene=26010 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24574 | |HGNC=24574 | ||
|TSSclassifier=strong | |||
|UniProt=C9JKE4 | |UniProt=C9JKE4 | ||
|association_with_transcript=12bp_to_ENST00000421573_5end | |association_with_transcript=12bp_to_ENST00000421573_5end | ||
|cluster_id=chr2:201242740..201242755,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_25_at_SPATS2L_5end | |description=CAGE_peak_25_at_SPATS2L_5end | ||
|id=chr2:201242740..201242755,+ | |id=chr2:201242740..201242755,+ | ||
|ontology_enrichment_celltype=CL:0002563!4.47e-07!4 | |ontology_enrichment_celltype=CL:0002563!4.47e-07!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4929!5.88e-14!2;DOID:3493!7.61e-14!2;DOID:305!9.57e-12!106;DOID:0050687!4.64e-09!143;DOID:299!1.36e-08!25;DOID:0050619!2.04e-07!1;DOID:1357!2.04e-07!1;DOID:3119!2.21e-07!14 | |ontology_enrichment_disease=DOID:4929!5.88e-14!2;DOID:3493!7.61e-14!2;DOID:305!9.57e-12!106;DOID:0050687!4.64e-09!143;DOID:299!1.36e-08!25;DOID:0050619!2.04e-07!1;DOID:1357!2.04e-07!1;DOID:3119!2.21e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.07e-13;2!DOID:4929;1.46e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,9.40e-14,2;DOID:4929,1.37e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!1.48e-27!35;UBERON:0000160!8.27e-26!27;UBERON:0002294!1.63e-22!7;UBERON:0001173!1.63e-22!7;UBERON:0004912!1.63e-22!7;UBERON:0002394!6.42e-15!4;UBERON:0003928!6.42e-15!4;UBERON:0000059!2.15e-14!11;UBERON:0004921!1.13e-13!129;UBERON:0004185!1.13e-13!129;UBERON:0001007!1.28e-13!155;UBERON:0001555!1.28e-13!155;UBERON:0007026!1.28e-13!155;UBERON:0004119!3.81e-12!169;UBERON:0000925!3.81e-12!169;UBERON:0006595!3.81e-12!169;UBERON:0004907!7.31e-12!5;UBERON:0001155!1.44e-11!9;UBERON:0002108!8.63e-11!14;UBERON:0002110!2.14e-09!3;UBERON:0006242!2.14e-09!3;UBERON:0009497!1.61e-08!25;UBERON:0000015!1.61e-08!25;UBERON:0002423!1.61e-08!25;UBERON:0006235!1.61e-08!25;UBERON:0004161!1.61e-08!25;UBERON:0009856!3.64e-08!26;UBERON:0004913!6.37e-08!1;UBERON:0003703!6.37e-08!1;UBERON:0001174!6.37e-08!1;UBERON:0004914!6.37e-08!1;UBERON:0003929!7.18e-08!54;UBERON:0000077!8.39e-08!130;UBERON:0001154!1.22e-07!1;UBERON:0001153!1.22e-07!1;UBERON:0001764!2.04e-07!1;UBERON:0001825!2.04e-07!1;UBERON:0000997!3.17e-07!1;UBERON:0005056!3.17e-07!1;UBERON:0005911!3.49e-07!82;UBERON:0001052!3.60e-07!4;UBERON:0001242!4.47e-07!4;UBERON:0001262!4.47e-07!4;UBERON:0004786!4.47e-07!4;UBERON:0004808!4.47e-07!4;UBERON:0001277!4.47e-07!4 | |ontology_enrichment_uberon=UBERON:0005409!1.48e-27!35;UBERON:0000160!8.27e-26!27;UBERON:0002294!1.63e-22!7;UBERON:0001173!1.63e-22!7;UBERON:0004912!1.63e-22!7;UBERON:0002394!6.42e-15!4;UBERON:0003928!6.42e-15!4;UBERON:0000059!2.15e-14!11;UBERON:0004921!1.13e-13!129;UBERON:0004185!1.13e-13!129;UBERON:0001007!1.28e-13!155;UBERON:0001555!1.28e-13!155;UBERON:0007026!1.28e-13!155;UBERON:0004119!3.81e-12!169;UBERON:0000925!3.81e-12!169;UBERON:0006595!3.81e-12!169;UBERON:0004907!7.31e-12!5;UBERON:0001155!1.44e-11!9;UBERON:0002108!8.63e-11!14;UBERON:0002110!2.14e-09!3;UBERON:0006242!2.14e-09!3;UBERON:0009497!1.61e-08!25;UBERON:0000015!1.61e-08!25;UBERON:0002423!1.61e-08!25;UBERON:0006235!1.61e-08!25;UBERON:0004161!1.61e-08!25;UBERON:0009856!3.64e-08!26;UBERON:0004913!6.37e-08!1;UBERON:0003703!6.37e-08!1;UBERON:0001174!6.37e-08!1;UBERON:0004914!6.37e-08!1;UBERON:0003929!7.18e-08!54;UBERON:0000077!8.39e-08!130;UBERON:0001154!1.22e-07!1;UBERON:0001153!1.22e-07!1;UBERON:0001764!2.04e-07!1;UBERON:0001825!2.04e-07!1;UBERON:0000997!3.17e-07!1;UBERON:0005056!3.17e-07!1;UBERON:0005911!3.49e-07!82;UBERON:0001052!3.60e-07!4;UBERON:0001242!4.47e-07!4;UBERON:0001262!4.47e-07!4;UBERON:0004786!4.47e-07!4;UBERON:0004808!4.47e-07!4;UBERON:0001277!4.47e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;7.85e-79;4!UBERON:0000160;1.59e-34;17!UBERON:0002114;1.38e-33;2!UBERON:0005409;4.03e-27;22!UBERON:0004913;1.11e-25;1!UBERON:0003703;1.11e-25;1!UBERON:0001174;1.11e-25;1!UBERON:0004914;1.11e-25;1!UBERON:0004921;2.76e-17;33!UBERON:0002394;1.98e-07;4!UBERON:0003928;1.98e-07;4!UBERON:0001555;5.55e-07;54!UBERON:0000922;6.77e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,8.69e-79,4;UBERON:0000160,1.59e-34,17;UBERON:0002114,1.50e-33,2;UBERON:0004913,9.79e-26,1;UBERON:0003703,9.79e-26,1;UBERON:0001174,9.79e-26,1;UBERON:0004914,9.79e-26,1;UBERON:0005409,4.84e-24,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.359473404589307,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.884575645033392,3.66618086960175,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77427303460454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,1.29556554731173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,2.68219434960993,0,0,0,0,0,0,0,0,0,0,8.18046075944213,2.40415516554353,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359300808426348,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.359473404589307,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.884575645033392,3.66618086960175,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77427303460454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,1.29556554731173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,2.68219434960993,0,0,0,0,0,0,0,0,0,0,8.18046075944213,2.40415516554353,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359300808426348,0,0,0,0,0,0 | ||
|short_description=p25@SPATS2L | |short_description=p25@SPATS2L | ||
}} | }} |
Latest revision as of 10:21, 19 September 2015
Short description: | p25@SPATS2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_SPATS2L_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 12bp_to_ENST00000421573_5end |
EntrezGene: | SPATS2L |
HGNC: | 24574 |
UniProt: | C9JKE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 8.69e-79 | 4 |
intestine | 1.59e-34 | 17 |
duodenum | 1.50e-33 | 2 |
hepatopancreatic ampulla | 9.79e-26 | 1 |
extrahepatic bile duct | 9.79e-26 | 1 |
common bile duct | 9.79e-26 | 1 |
duodenal papilla | 9.79e-26 | 1 |
gastrointestinal system | 4.84e-24 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 9.40e-14 | 2 |
tubular adenocarcinoma | 1.37e-13 | 2 |