FFCP PHASE1:Hg19::chr1:158301703..158301708,-: Difference between revisions
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|id=chr1:158301703..158301708,-
|short_description=p19@CD1B
|description=CAGE_peak_19_at_CD1B_5end
|association_with_transcript=-382bp_to_ENST00000368168,NM_001764,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=910 | |EntrezGene=910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1635 | |HGNC=1635 | ||
|TSSclassifier=strong | |||
|UniProt=P29016 | |UniProt=P29016 | ||
|association_with_transcript=-382bp_to_ENST00000368168,NM_001764,uc001frx.2,uc010pic.1_5end | |||
|cluster_id=chr1:158301703..158301708,- | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_19_at_CD1B_5end | |||
|id=chr1:158301703..158301708,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!5.06e-34!4;UBERON:0005058!5.06e-34!4;UBERON:0009113!5.06e-34!4;UBERON:0003295!5.06e-34!4;UBERON:0005562!5.06e-34!4;UBERON:0000974!2.27e-30!10;UBERON:0003351!4.34e-23!6;UBERON:0004177!5.89e-20!7;UBERON:0000341!1.07e-17!2;UBERON:0003408!2.66e-14!10;UBERON:0001042!2.66e-14!10;UBERON:0009145!2.66e-14!10;UBERON:0006562!4.25e-13!11;UBERON:0009722!4.25e-13!11;UBERON:0007690!4.25e-13!11;UBERON:0008814!7.09e-10!15;UBERON:0001557!5.35e-08!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.43e-131;2!UBERON:0005058;6.43e-131;2!UBERON:0009113;6.43e-131;2!UBERON:0004177;2.51e-53;5!UBERON:0005057;2.51e-53;5!UBERON:0000077;6.40e-11;27!UBERON:0002405;6.40e-11;27!UBERON:0002390;2.46e-07;32!UBERON:0002368;2.47e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.35e-66,4;UBERON:0005058,3.35e-66,4;UBERON:0009113,3.35e-66,4;UBERON:0003295,3.35e-66,4;UBERON:0005562,3.35e-66,4;UBERON:0003351,1.22e-44,6;UBERON:0004177,1.80e-38,7;UBERON:0005057,1.80e-38,7;UBERON:0000974,2.38e-27,10;UBERON:0003408,2.38e-27,10;UBERON:0001042,2.38e-27,10;UBERON:0009145,2.38e-27,10;UBERON:0006562,5.49e-25,11;UBERON:0009722,5.49e-25,11;UBERON:0007690,5.49e-25,11;UBERON:0008814,9.05e-16,18;UBERON:0001557,5.27e-15,19;UBERON:0004807,1.47e-10,28;UBERON:0000077,3.10e-10,29;UBERON:0002368,1.14e-08,35;UBERON:0000949,5.58e-07,45;UBERON:0000072,1.00e-06,47 | |||
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|short_description=p19@CD1B | |||
}} | }} |
Latest revision as of 20:49, 17 September 2015
Short description: | p19@CD1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_CD1B_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -382bp_to_ENST00000368168, NM_001764, uc001frx.2, uc010pic.1_5end |
EntrezGene: | CD1B |
HGNC: | 1635 |
UniProt: | P29016 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.35e-66 | 4 |
hemolymphoid system gland | 3.35e-66 | 4 |
thymic region | 3.35e-66 | 4 |
pharyngeal gland | 3.35e-66 | 4 |
thymus primordium | 3.35e-66 | 4 |
pharyngeal epithelium | 1.22e-44 | 6 |
hemopoietic organ | 1.80e-38 | 7 |
immune organ | 1.80e-38 | 7 |
neck | 2.38e-27 | 10 |
gland of gut | 2.38e-27 | 10 |
chordate pharynx | 2.38e-27 | 10 |
pharyngeal region of foregut | 2.38e-27 | 10 |
pharynx | 5.49e-25 | 11 |
entire pharyngeal arch endoderm | 5.49e-25 | 11 |
early pharyngeal endoderm | 5.49e-25 | 11 |
pharyngeal arch system | 9.05e-16 | 18 |
upper respiratory tract | 5.27e-15 | 19 |
respiratory system epithelium | 1.47e-10 | 28 |
mixed endoderm/mesoderm-derived structure | 3.10e-10 | 29 |
endocrine gland | 1.14e-08 | 35 |
endocrine system | 5.58e-07 | 45 |
segment of respiratory tract | 1.00e-06 | 47 |