FFCP PHASE1:Hg19::chr1:158224323..158224353,+: Difference between revisions
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|id=chr1:158224323..158224353,+
|short_description=p2@CD1A
|description=CAGE_peak_2_at_CD1A_5end
|association_with_transcript=396bp_to_ENST00000289429,NM_001763,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=909 | |EntrezGene=909 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1634 | |HGNC=1634 | ||
|TSSclassifier=strong | |||
|UniProt=P06126 | |UniProt=P06126 | ||
|association_with_transcript=396bp_to_ENST00000289429,NM_001763,uc001frt.2_5end | |||
|cluster_id=chr1:158224323..158224353,+ | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_2_at_CD1A_5end | |||
|id=chr1:158224323..158224353,+ | |||
|ontology_enrichment_celltype=CL:0000840!9.69e-35!5;CL:0001029!9.69e-35!5;CL:0000990!3.83e-23!8;CL:0000451!6.46e-19!10;CL:0001014!1.16e-17!2;CL:0001016!1.16e-17!2;CL:0000453!1.36e-07!5;CL:0002274!3.34e-07!5;CL:0000457!3.34e-07!5;CL:0002191!3.34e-07!5;CL:0000097!3.34e-07!5;CL:0000831!3.34e-07!5;CL:0002028!3.34e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000840;8.36e-92;5!CL:0000990;2.13e-61;8!CL:0000451;2.49e-50;10!CL:0001014;7.83e-45;2!CL:0001016;7.83e-45;2!CL:0000453;1.24e-18;5!CL:0002594;9.90e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,8.37e-92,5;CL:0001029,8.37e-92,5;CL:0000990,2.13e-61,8;CL:0000451,2.49e-50,10;CL:0001014,7.83e-45,2;CL:0001016,7.83e-45,2;CL:0000453,1.24e-18,5;CL:0002009,3.83e-09,61;CL:0000557,2.40e-08,67;CL:0002594,9.63e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.88e-11!7;UBERON:0007029!2.16e-09!1;UBERON:0002146!3.25e-09!1;UBERON:0005623!3.25e-09!1;UBERON:0002370!3.26e-09!4;UBERON:0005058!3.26e-09!4;UBERON:0009113!3.26e-09!4;UBERON:0003295!3.26e-09!4;UBERON:0005562!3.26e-09!4;UBERON:0000974!6.60e-08!10;UBERON:0002390!1.07e-07!102;UBERON:0003061!1.07e-07!102;UBERON:0002193!7.46e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.91e-44;2!UBERON:0005058;1.91e-44;2!UBERON:0009113;1.91e-44;2!UBERON:0004177;1.77e-18;5!UBERON:0005057;1.77e-18;5!UBERON:0001310;9.90e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.02e-23,4;UBERON:0005058,8.02e-23,4;UBERON:0009113,8.02e-23,4;UBERON:0003295,8.02e-23,4;UBERON:0005562,8.02e-23,4;UBERON:0003351,1.41e-15,6;UBERON:0004177,1.69e-13,7;UBERON:0005057,1.69e-13,7;UBERON:0002405,2.03e-11,93;UBERON:0002390,7.79e-11,98;UBERON:0003061,7.79e-11,98;UBERON:0002193,7.97e-10,108;UBERON:0000974,9.65e-10,10;UBERON:0003408,9.65e-10,10;UBERON:0001042,9.65e-10,10;UBERON:0009145,9.65e-10,10;UBERON:0006562,6.10e-09,11;UBERON:0009722,6.10e-09,11;UBERON:0007690,6.10e-09,11;UBERON:0002371,2.21e-07,76;UBERON:0001474,7.47e-07,82;UBERON:0001310,9.63e-07,4 | |||
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|short_description=p2@CD1A | |||
}} | }} |
Latest revision as of 20:11, 17 September 2015
Short description: | p2@CD1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CD1A_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 396bp_to_ENST00000289429, NM_001763, uc001frt.2_5end |
EntrezGene: | CD1A |
HGNC: | 1634 |
UniProt: | P06126 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 8.37e-92 | 5 |
common dendritic progenitor | 8.37e-92 | 5 |
conventional dendritic cell | 2.13e-61 | 8 |
dendritic cell | 2.49e-50 | 10 |
CD1a-positive Langerhans cell | 7.83e-45 | 2 |
immature CD1a-positive Langerhans cell | 7.83e-45 | 2 |
Langerhans cell | 1.24e-18 | 5 |
macrophage dendritic cell progenitor | 3.83e-09 | 61 |
granulocyte monocyte progenitor cell | 2.40e-08 | 67 |
smooth muscle cell of the umbilical artery | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.02e-23 | 4 |
hemolymphoid system gland | 8.02e-23 | 4 |
thymic region | 8.02e-23 | 4 |
pharyngeal gland | 8.02e-23 | 4 |
thymus primordium | 8.02e-23 | 4 |
pharyngeal epithelium | 1.41e-15 | 6 |
hemopoietic organ | 1.69e-13 | 7 |
immune organ | 1.69e-13 | 7 |
immune system | 2.03e-11 | 93 |
hematopoietic system | 7.79e-11 | 98 |
blood island | 7.79e-11 | 98 |
hemolymphoid system | 7.97e-10 | 108 |
neck | 9.65e-10 | 10 |
gland of gut | 9.65e-10 | 10 |
chordate pharynx | 9.65e-10 | 10 |
pharyngeal region of foregut | 9.65e-10 | 10 |
pharynx | 6.10e-09 | 11 |
entire pharyngeal arch endoderm | 6.10e-09 | 11 |
early pharyngeal endoderm | 6.10e-09 | 11 |
bone marrow | 2.21e-07 | 76 |
bone element | 7.47e-07 | 82 |
umbilical artery | 9.63e-07 | 4 |