FFCP PHASE1:Hg19::chr1:158223689..158223707,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:158223689..158223707,+
|short_description=p15@CD1A
|description=CAGE_peak_15_at_CD1A_5end
|association_with_transcript=-219bp_to_ENST00000289429,NM_001763,...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=909 | |EntrezGene=909 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1634 | |HGNC=1634 | ||
|TSSclassifier=strong | |||
|UniProt=P06126 | |UniProt=P06126 | ||
|association_with_transcript=-219bp_to_ENST00000289429,NM_001763,uc001frt.2_5end | |||
|cluster_id=chr1:158223689..158223707,+ | |||
|coexpression_cluster_id=C141 | |||
|description=CAGE_peak_15_at_CD1A_5end | |||
|id=chr1:158223689..158223707,+ | |||
|ontology_enrichment_celltype=CL:0000840!7.25e-08!5;CL:0001029!7.25e-08!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.13e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.73e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002370!2.22e-40!4;UBERON:0005058!2.22e-40!4;UBERON:0009113!2.22e-40!4;UBERON:0003295!2.22e-40!4;UBERON:0005562!2.22e-40!4;UBERON:0003351!2.38e-27!6;UBERON:0004177!1.28e-23!7;UBERON:0000974!6.93e-17!10;UBERON:0003408!6.93e-17!10;UBERON:0001042!6.93e-17!10;UBERON:0009145!6.93e-17!10;UBERON:0006562!1.88e-15!11;UBERON:0009722!1.88e-15!11;UBERON:0007690!1.88e-15!11;UBERON:0008814!1.27e-11!15;UBERON:0001557!2.17e-09!19;UBERON:0005057!4.02e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.98e-131;2!UBERON:0005058;8.98e-131;2!UBERON:0009113;8.98e-131;2!UBERON:0004177;2.86e-53;5!UBERON:0005057;2.86e-53;5!UBERON:0000077;6.56e-11;27!UBERON:0002405;6.56e-11;27!UBERON:0002368;2.51e-07;33!UBERON:0002390;2.51e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.67e-66,4;UBERON:0005058,4.67e-66,4;UBERON:0009113,4.67e-66,4;UBERON:0003295,4.67e-66,4;UBERON:0005562,4.67e-66,4;UBERON:0003351,1.52e-44,6;UBERON:0004177,2.18e-38,7;UBERON:0005057,2.18e-38,7;UBERON:0000974,2.72e-27,10;UBERON:0003408,2.72e-27,10;UBERON:0001042,2.72e-27,10;UBERON:0009145,2.72e-27,10;UBERON:0006562,6.20e-25,11;UBERON:0009722,6.20e-25,11;UBERON:0007690,6.20e-25,11;UBERON:0008814,9.75e-16,18;UBERON:0001557,5.66e-15,19;UBERON:0004807,1.54e-10,28;UBERON:0000077,3.24e-10,29;UBERON:0002368,1.18e-08,35;UBERON:0000949,5.75e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569134746787313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0334225573761,1.67601728598816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569134746787313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0334225573761,1.67601728598816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p15@CD1A | |||
}} | }} |
Latest revision as of 20:03, 17 September 2015
Short description: | p15@CD1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CD1A_5end |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | -219bp_to_ENST00000289429, NM_001763, uc001frt.2_5end |
EntrezGene: | CD1A |
HGNC: | 1634 |
UniProt: | P06126 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 4.67e-66 | 4 |
hemolymphoid system gland | 4.67e-66 | 4 |
thymic region | 4.67e-66 | 4 |
pharyngeal gland | 4.67e-66 | 4 |
thymus primordium | 4.67e-66 | 4 |
pharyngeal epithelium | 1.52e-44 | 6 |
hemopoietic organ | 2.18e-38 | 7 |
immune organ | 2.18e-38 | 7 |
neck | 2.72e-27 | 10 |
gland of gut | 2.72e-27 | 10 |
chordate pharynx | 2.72e-27 | 10 |
pharyngeal region of foregut | 2.72e-27 | 10 |
pharynx | 6.20e-25 | 11 |
entire pharyngeal arch endoderm | 6.20e-25 | 11 |
early pharyngeal endoderm | 6.20e-25 | 11 |
pharyngeal arch system | 9.75e-16 | 18 |
upper respiratory tract | 5.66e-15 | 19 |
respiratory system epithelium | 1.54e-10 | 28 |
mixed endoderm/mesoderm-derived structure | 3.24e-10 | 29 |
endocrine gland | 1.18e-08 | 35 |
endocrine system | 5.75e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.73e-08 | 10 |