FFCP PHASE1:Hg19::chr17:67264947..67264981,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23461 | |EntrezGene=23461 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=35 | |HGNC=35 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_uc002jib.2_5end | |association_with_transcript=33bp_to_uc002jib.2_5end | ||
|cluster_id=chr17:67264947..67264981,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_7_at_ABCA5_5end | |description=CAGE_peak_7_at_ABCA5_5end | ||
|id=chr17:67264947..67264981,- | |id=chr17:67264947..67264981,- | ||
|ontology_enrichment_celltype=CL:0000182;1.33e-29;12 | |ontology_enrichment_celltype=CL:0000181!1.59e-19!12;CL:0000417!1.59e-19!12;CL:0000668!1.59e-19!12;CL:0000414!1.59e-19!12;CL:0000412!1.59e-19!12;CL:0000182!1.59e-19!12;CL:0000223!1.29e-07!59 | ||
| | |ontology_enrichment_celltype_v019=CL:0000182;1.33e-29;12 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000182,1.33e-29,12 | ||
|ontology_enrichment_uberon=UBERON:0002107;1.62e-41;19!UBERON:0006925;1.62e-41;19!UBERON:0002423;1.29e-31;25!UBERON:0002365;1.35e-25;31!UBERON:0002330;1.35e-25;31!UBERON:0002368;8.35e-22;33!UBERON:0000949;1.62e-16;43!UBERON:0005172;1.78e-11;52!UBERON:0005173;1.78e-11;52!UBERON:0002417;9.20e-09;58!UBERON:0000916;9.20e-09;58!UBERON:0002530;1.03e-08;57!UBERON:0001007;1.73e-07;81 | |ontology_enrichment_development_v019=UBERON:0004161;1.17e-18;11!UBERON:0009497;6.65e-16;13!UBERON:0001041;4.15e-12;30!UBERON:0003104;6.54e-07;31 | ||
|ontology_enrichment_disease=DOID:178!1.54e-07!1;DOID:326!1.54e-07!1;DOID:3978!1.54e-07!1;DOID:3394!1.54e-07!1;DOID:5844!1.54e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0008835!3.28e-23!22;UBERON:0003894!3.28e-23!22;UBERON:0009854!3.88e-22!23;UBERON:0002107!1.91e-21!19;UBERON:0006925!1.91e-21!19;UBERON:0008836!1.91e-21!19;UBERON:0007499!2.99e-20!25;UBERON:0009497!2.99e-20!25;UBERON:0000015!2.99e-20!25;UBERON:0002423!2.99e-20!25;UBERON:0006235!2.99e-20!25;UBERON:0004161!2.99e-20!25;UBERON:0009856!2.05e-19!26;UBERON:0005057!2.33e-15!26;UBERON:0003929!6.27e-13!54;UBERON:0002365!1.08e-12!31;UBERON:0002330!1.08e-12!31;UBERON:0005911!3.64e-11!82;UBERON:0002368!4.18e-11!35;UBERON:0001041!2.39e-10!98;UBERON:0004921!1.08e-09!129;UBERON:0004185!1.08e-09!129;UBERON:0002530!1.44e-09!59;UBERON:0005172!2.14e-08!55;UBERON:0005173!2.14e-08!55;UBERON:0000949!2.24e-08!45;UBERON:0000077!2.35e-08!130;UBERON:0002405!2.72e-08!115;UBERON:0000998!5.70e-08!1;UBERON:0006868!5.70e-08!1;UBERON:0001007!1.50e-07!155;UBERON:0001555!1.50e-07!155;UBERON:0007026!1.50e-07!155;UBERON:0002417!1.99e-07!61;UBERON:0000916!1.99e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.62e-41;19!UBERON:0006925;1.62e-41;19!UBERON:0002423;1.29e-31;25!UBERON:0002365;1.35e-25;31!UBERON:0002330;1.35e-25;31!UBERON:0002368;8.35e-22;33!UBERON:0000949;1.62e-16;43!UBERON:0005172;1.78e-11;52!UBERON:0005173;1.78e-11;52!UBERON:0002417;9.20e-09;58!UBERON:0000916;9.20e-09;58!UBERON:0002530;1.03e-08;57!UBERON:0001007;1.73e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.68e-41,19;UBERON:0006925,1.68e-41,19;UBERON:0008836,1.68e-41,19;UBERON:0008835,7.03e-36,22;UBERON:0003894,7.03e-36,22;UBERON:0009854,2.49e-34,23;UBERON:0007499,1.33e-31,25;UBERON:0009497,1.33e-31,25;UBERON:0000015,1.33e-31,25;UBERON:0002423,1.33e-31,25;UBERON:0006235,1.33e-31,25;UBERON:0004161,1.33e-31,25;UBERON:0009856,2.14e-30,26;UBERON:0002365,1.59e-25,31;UBERON:0002330,1.59e-25,31;UBERON:0002368,1.26e-22,35;UBERON:0000949,1.26e-17,45;UBERON:0003929,1.06e-14,54;UBERON:0005172,1.06e-14,54;UBERON:0005173,1.06e-14,54;UBERON:0002530,1.85e-13,59;UBERON:0002417,3.10e-13,60;UBERON:0000916,3.10e-13,60;UBERON:0005911,5.00e-13,82;UBERON:0001041,2.85e-12,87;UBERON:0005177,1.50e-10,101;UBERON:0009569,1.70e-09,112;UBERON:0004921,6.31e-09,118;UBERON:0001007,3.12e-07,145;UBERON:0001555,3.12e-07,145;UBERON:0007026,3.12e-07,145;UBERON:0003914,9.28e-07,117 | |||
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|short_description=p7@ABCA5 | |short_description=p7@ABCA5 | ||
}} | }} |
Latest revision as of 01:11, 17 September 2015
Short description: | p7@ABCA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ABCA5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 33bp_to_uc002jib.2_5end |
EntrezGene: | ABCA5 |
HGNC: | 35 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.33e-29 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.68e-41 | 19 |
digestive gland | 1.68e-41 | 19 |
liver bud | 1.68e-41 | 19 |
hepatic diverticulum | 7.03e-36 | 22 |
liver primordium | 7.03e-36 | 22 |
digestive tract diverticulum | 2.49e-34 | 23 |
epithelial sac | 1.33e-31 | 25 |
epithelium of foregut-midgut junction | 1.33e-31 | 25 |
anatomical boundary | 1.33e-31 | 25 |
hepatobiliary system | 1.33e-31 | 25 |
foregut-midgut junction | 1.33e-31 | 25 |
septum transversum | 1.33e-31 | 25 |
sac | 2.14e-30 | 26 |
exocrine gland | 1.59e-25 | 31 |
exocrine system | 1.59e-25 | 31 |
endocrine gland | 1.26e-22 | 35 |
endocrine system | 1.26e-17 | 45 |
gut epithelium | 1.06e-14 | 54 |
abdomen element | 1.06e-14 | 54 |
abdominal segment element | 1.06e-14 | 54 |
gland | 1.85e-13 | 59 |
abdominal segment of trunk | 3.10e-13 | 60 |
abdomen | 3.10e-13 | 60 |
endo-epithelium | 5.00e-13 | 82 |
foregut | 2.85e-12 | 87 |
trunk region element | 1.50e-10 | 101 |
subdivision of trunk | 1.70e-09 | 112 |
subdivision of digestive tract | 6.31e-09 | 118 |
digestive system | 3.12e-07 | 145 |
digestive tract | 3.12e-07 | 145 |
primitive gut | 3.12e-07 | 145 |
epithelial tube | 9.28e-07 | 117 |