FFCP PHASE1:Hg19::chr1:153935952..153935967,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:153935952..153935967,-
|short_description=p4@SLC39A1
|description=CAGE_peak_4_at_SLC39A1_5end
|association_with_transcript=-1bp_to_ENST00000368623,uc001fdj...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27173 | |EntrezGene=27173 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12876 | |HGNC=12876 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NY26 | |UniProt=Q9NY26 | ||
|association_with_transcript=-1bp_to_ENST00000368623,uc001fdj.2_5end | |||
|cluster_id=chr1:153935952..153935967,- | |||
|description=CAGE_peak_4_at_SLC39A1_5end | |||
|id=chr1:153935952..153935967,- | |||
|ontology_enrichment_celltype=CL:0000066!1.87e-09!254;CL:0002319!6.96e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.90e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.43e-11,253;CL:0002322,4.43e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.38e-11!143;DOID:305!3.94e-11!106;DOID:14566!1.84e-08!239;DOID:162!3.69e-08!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.03e-14,106;DOID:0050687,5.99e-13,143;DOID:14566,4.80e-08,239;DOID:162,1.49e-07,235 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@SLC39A1 | |||
}} | }} |
Latest revision as of 07:56, 17 September 2015
Short description: | p4@SLC39A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC39A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000368623, uc001fdj.2_5end |
EntrezGene: | SLC39A1 |
HGNC: | 12876 |
UniProt: | Q9NY26 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.43e-11 | 253 |
embryonic stem cell | 4.43e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.03e-14 | 106 |
cell type cancer | 5.99e-13 | 143 |
disease of cellular proliferation | 4.80e-08 | 239 |
cancer | 1.49e-07 | 235 |