FFCP PHASE1:Hg19::chr1:153643418..153643429,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:153643418..153643429,-
|short_description=p2@ILF2
|description=CAGE_peak_2_at_ILF2_5end
|association_with_transcript=28bp_to_ENST00000368681_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3608 | |EntrezGene=3608 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6037 | |HGNC=6037 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000368681_5end | |||
|cluster_id=chr1:153643418..153643429,- | |||
|coexpression_cluster_id=C3873 | |||
|description=CAGE_peak_2_at_ILF2_5end | |||
|id=chr1:153643418..153643429,- | |||
|ontology_enrichment_celltype=CL:0000012!4.77e-20!682;CL:0000548!1.92e-18!679;CL:0000004!1.92e-18!679;CL:0000255!1.92e-18!679;CL:0000003!1.59e-12!722;CL:0002139!9.14e-11!24;CL:0000144!1.81e-09!625;CL:0000071!3.87e-09!18;CL:0002546!3.87e-09!18;CL:0002321!3.32e-07!248;CL:0002319!4.22e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.09e-10;24!CL:0000071;3.69e-09;18!CL:0002319;4.32e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,9.14e-11,24;CL:0000071,3.86e-09,18;CL:0002546,3.86e-09,18;CL:0002321,3.00e-07,250;CL:0002319,4.22e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002546;3.69e-09;18 | |||
|ontology_enrichment_disease=DOID:162!6.41e-30!235;DOID:14566!7.13e-29!239;DOID:0050686!3.58e-18!137;DOID:2531!1.04e-14!51;DOID:0060083!1.04e-14!51;DOID:0050687!6.07e-13!143;DOID:1240!1.52e-12!39;DOID:305!1.96e-10!106;DOID:8692!2.18e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.53e-10;39!DOID:8692;4.63e-09;31!DOID:2531;5.56e-09;51!DOID:0060083;5.56e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.41e-30,235;DOID:14566,7.13e-29,239;DOID:0050686,3.58e-18,137;DOID:2531,1.04e-14,51;DOID:0060083,1.04e-14,51;DOID:0050687,6.07e-13,143;DOID:1240,1.52e-12,39;DOID:305,1.96e-10,106;DOID:8692,2.18e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0001986!3.87e-09!18;UBERON:0004638!3.87e-09!18;UBERON:0004852!3.87e-09!18;UBERON:0000487!4.75e-09!22;UBERON:0006914!6.99e-08!25;UBERON:0000055!1.43e-07!69;UBERON:0004872!7.09e-07!84;UBERON:0002049!8.01e-07!79;UBERON:0007798!8.01e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.69e-09;18!UBERON:0001986;3.69e-09;18!UBERON:0004852;3.69e-09;18!UBERON:0000487;4.70e-09;22!UBERON:0006914;7.30e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.86e-09,18;UBERON:0001986,3.86e-09,18;UBERON:0004852,3.86e-09,18;UBERON:0000487,4.75e-09,22;UBERON:0006914,6.99e-08,25;UBERON:0000055,8.29e-08,68;UBERON:0004872,4.55e-07,83;UBERON:0002049,5.06e-07,78;UBERON:0007798,5.06e-07,78 | |||
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| ||
|short_description=p2@ILF2 | |||
}} | }} |
Latest revision as of 07:02, 17 September 2015
Short description: | p2@ILF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ILF2_5end |
Coexpression cluster: | C3873_neuroblastoma_nonsmall_teratocarcinoma_acute_neuroectodermal_medulloblastoma_small |
Association with transcript: | 28bp_to_ENST00000368681_5end |
EntrezGene: | ILF2 |
HGNC: | 6037 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 9.14e-11 | 24 |
blood vessel endothelial cell | 3.86e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.86e-09 | 18 |
embryonic cell | 3.00e-07 | 250 |
neural cell | 4.22e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.86e-09 | 18 |
endothelium | 3.86e-09 | 18 |
cardiovascular system endothelium | 3.86e-09 | 18 |
simple squamous epithelium | 4.75e-09 | 22 |
squamous epithelium | 6.99e-08 | 25 |
vessel | 8.29e-08 | 68 |
splanchnic layer of lateral plate mesoderm | 4.55e-07 | 83 |
vasculature | 5.06e-07 | 78 |
vascular system | 5.06e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.41e-30 | 235 |
disease of cellular proliferation | 7.13e-29 | 239 |
organ system cancer | 3.58e-18 | 137 |
hematologic cancer | 1.04e-14 | 51 |
immune system cancer | 1.04e-14 | 51 |
cell type cancer | 6.07e-13 | 143 |
leukemia | 1.52e-12 | 39 |
carcinoma | 1.96e-10 | 106 |
myeloid leukemia | 2.18e-09 | 31 |