FFCP PHASE1:Hg19::chr10:46992949..46993010,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:46992949..46993010,+ | |||
|description=CAGE_peak_at_chr10:46992949..46993010,+ | |description=CAGE_peak_at_chr10:46992949..46993010,+ | ||
|id=chr10:46992949..46993010,+ | |id=chr10:46992949..46993010,+ | ||
|ontology_enrichment_celltype=CL:1000497;1.00e-07;17!CL:0002518;1.00e-07;17 | |ontology_enrichment_celltype=CL:0000066!3.26e-16!254 | ||
| | |ontology_enrichment_celltype_v019=CL:1000497;1.00e-07;17!CL:0002518;1.00e-07;17 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000066,5.79e-09,253;CL:1000497,1.16e-07,17;CL:0002518,1.16e-07,17 | ||
|ontology_enrichment_uberon=UBERON:0004921;1.26e-14;33!UBERON:0001737;7.75e-14;9!UBERON:0001557;7.75e-14;9!UBERON:0005409;4.11e-10;22!UBERON:0002108;4.63e-10;4!UBERON:0000065;6.54e-10;44!UBERON:0000072;4.37e-09;37!UBERON:0002048;5.15e-09;22!UBERON:0000117;5.15e-09;22!UBERON:0000171;5.15e-09;22!UBERON:0000170;5.15e-09;22!UBERON:0000160;8.83e-08;17!UBERON:0006554;9.45e-08;30!UBERON:0001008;9.45e-08;30!UBERON:0001041;2.20e-07;14!UBERON:0001555;9.14e-07;54 | |ontology_enrichment_development_v019=UBERON:0008947;1.28e-16;29!UBERON:0006595;1.44e-09;86!UBERON:0006215;2.16e-07;3 | ||
|ontology_enrichment_disease=DOID:305!2.98e-12!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.98e-12,106;DOID:0050687,1.59e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004921!3.69e-19!129;UBERON:0004185!3.69e-19!129;UBERON:0004119!4.17e-19!169;UBERON:0000925!4.17e-19!169;UBERON:0006595!4.17e-19!169;UBERON:0001007!1.86e-18!155;UBERON:0001555!1.86e-18!155;UBERON:0007026!1.86e-18!155;UBERON:0000481!1.56e-17!347;UBERON:0007023!3.70e-16!115;UBERON:0000064!1.23e-15!219;UBERON:0000062!3.51e-15!511;UBERON:0000077!5.17e-13!130;UBERON:0000063!4.04e-12!97;UBERON:0000153!8.42e-11!129;UBERON:0007811!8.42e-11!129;UBERON:0000922!9.02e-11!612;UBERON:0004121!1.06e-10!169;UBERON:0000065!1.29e-10!53;UBERON:0001008!1.48e-10!45;UBERON:0000477!1.56e-10!286;UBERON:0001041!1.60e-10!98;UBERON:0005743!1.88e-10!86;UBERON:0001017!3.12e-10!82;UBERON:0001004!3.74e-10!72;UBERON:0003075!3.87e-10!86;UBERON:0007284!3.87e-10!86;UBERON:0001049!4.29e-10!57;UBERON:0005068!4.29e-10!57;UBERON:0006241!4.29e-10!57;UBERON:0007135!4.29e-10!57;UBERON:0006554!4.98e-10!44;UBERON:0000924!5.79e-10!173;UBERON:0006601!5.79e-10!173;UBERON:0000033!6.39e-10!123;UBERON:0002616!9.77e-10!59;UBERON:0000464!3.60e-09!104;UBERON:0002346!4.46e-09!90;UBERON:0008947!5.51e-09!38;UBERON:0003258!5.51e-09!38;UBERON:0005911!8.16e-09!82;UBERON:0000923!8.89e-09!604;UBERON:0005291!8.89e-09!604;UBERON:0006598!8.89e-09!604;UBERON:0002532!8.89e-09!604;UBERON:0001557!1.03e-08!19;UBERON:0002050!1.12e-08!605;UBERON:0005423!1.12e-08!605;UBERON:0000955!2.16e-08!69;UBERON:0006238!2.16e-08!69;UBERON:0000072!2.94e-08!46;UBERON:0003064!2.97e-08!37;UBERON:0000489!3.15e-08!32;UBERON:0000073!3.53e-08!94;UBERON:0001016!3.53e-08!94;UBERON:0001737!3.86e-08!9;UBERON:0000466!7.23e-08!126;UBERON:0000468!7.34e-08!659;UBERON:0000467!7.45e-08!625;UBERON:0000480!9.28e-08!626;UBERON:0005177!1.18e-07!107;UBERON:0004111!1.39e-07!241;UBERON:0000475!1.48e-07!365;UBERON:0005409!1.78e-07!35;UBERON:0002113!7.73e-07!27;UBERON:0003918!7.73e-07!27;UBERON:0005095!7.73e-07!27;UBERON:0007687!7.73e-07!27;UBERON:0000483!8.37e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.26e-14;33!UBERON:0001737;7.75e-14;9!UBERON:0001557;7.75e-14;9!UBERON:0005409;4.11e-10;22!UBERON:0002108;4.63e-10;4!UBERON:0000065;6.54e-10;44!UBERON:0000072;4.37e-09;37!UBERON:0002048;5.15e-09;22!UBERON:0000117;5.15e-09;22!UBERON:0000171;5.15e-09;22!UBERON:0000170;5.15e-09;22!UBERON:0000160;8.83e-08;17!UBERON:0006554;9.45e-08;30!UBERON:0001008;9.45e-08;30!UBERON:0001041;2.20e-07;14!UBERON:0001555;9.14e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.06e-24,118;UBERON:0001007,6.13e-23,145;UBERON:0001555,6.13e-23,145;UBERON:0007026,6.13e-23,145;UBERON:0004119,1.56e-21,160;UBERON:0000925,1.56e-21,160;UBERON:0006595,1.56e-21,160;UBERON:0011216,8.16e-16,223;UBERON:0001041,2.64e-15,87;UBERON:0008947,9.36e-15,38;UBERON:0003258,9.36e-15,38;UBERON:0001737,4.27e-14,9;UBERON:0000065,3.20e-12,54;UBERON:0001004,5.48e-12,74;UBERON:0001557,1.24e-10,19;UBERON:0000072,1.70e-10,47;UBERON:0002108,4.28e-10,4;UBERON:0001008,4.73e-09,48;UBERON:0002048,4.77e-09,22;UBERON:0000117,4.77e-09,22;UBERON:0000171,4.77e-09,22;UBERON:0000170,4.77e-09,22;UBERON:0005597,4.77e-09,22;UBERON:0000118,4.77e-09,22;UBERON:0005177,9.23e-09,101;UBERON:0005911,9.28e-09,82;UBERON:0005409,1.13e-08,25;UBERON:0005153,1.61e-08,37;UBERON:0006554,2.52e-08,47;UBERON:0000160,8.38e-08,17;UBERON:0000489,3.98e-07,31;UBERON:0004111,6.69e-07,240;UBERON:0005157,8.99e-07,47;UBERON:0005423,9.99e-07,581 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,4.42321085702716,34.1922572306489,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.702678285545008,3.79839318943367,1.45718115317017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,1.14721838155602,0.365921118388786,0.795178609928912,0.464775771478074,0.310983165046111,0.252320850875628,0.72995471815166,0,0,0,0,0,3.54920400119532,1.85443159085912,1.44606617930089,2.42646740011267,2.17879444092406,1.89816495288877,1.34831308160164,1.56977172100277,1.53898862778556,0,0,0.8231480226628,0,0,0,0,0,0.737930631258681,0.171567810298526,0.548751427043128,0,0.201057944823262,0.555530670951178,0,0,0,0.115930404975077,1.29149563659404,0,0,0,0,0,0,0,0,0,0.839910640994298,0,0.0895585227028483,0,0.383382679165211,0,0,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0.623912584592421,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0.241718899183244,4.41114234667227,1.84161977871793,0,0,0,3.15839729035188,3.00359814707218,3.92174884588428,4.38417673959782,1.58327443339314,0,0,0.215915916102139,0,0,1.00337954770971,0.254876273045038,0.831076008928724,0.895499018888713,0,0.261435451024901,0,2.29610251989794,0,2.16386124460217,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54188262097304,2.58303223602738,0,3.99087138183008,0.918893600827838,0,0,0,0,0,0,0,0,0,0,7.84128691139301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,0,1.19372242368845,7.42411702081597,6.14321404198464,0,0.281338832821026,0,0,0.422250816255987,0.597743964753209,0.552567831062295,0.503865495708552,0.20453736500431,0,0,2.51631383212515,1.79021174675609,0,0.197286811273867,0,0,0,0.278304294485554,3.99227596002388,0,0,0.724999575434793,0.1137934482855,0,3.78220290828698,0.344743373241465,0,0,0,0.241192877250816,6.10326945268333,17.1397852893398,9.16197618755997,0.219385397153973,0,1.25481369850743,0.538651809526579,0,0,0,0,0,0.549585560411174,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0.706765357169704,0,11.9431431729421,7.87272324079719,10.9985426088053,0,0,0,0.067401132980677,0,0.468528891450678,0,2.34797542718508,0,1.18375320854817,4.83962864194656,1.53036380815245,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,2.74378712760257,0,0.873633341210151,0,0,0,0,2.71569246167574,0,0.90392296312213,0,0,0.189932387867636,10.5597746676794,0.320635281006135,2.34798294213288,2.79733453414982,0.288180834308212,0,0,0,0,3.77110455386873,0,0,0,0,0,0.136905378891993,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0.482259445395058,0.825236619583403,0.415440338029185,0,9.2856234546954,0.242998226632099,0,0.472834243795189,1.46872846777995,0,0,3.07064315711112,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0.904980694530854,1.19009341568421,13.8580338686307,16.9155605356001,10.144804193931,3.14408610199332,13.2556497711103,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,1.77486482458964,0.869349641179368,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,1.54095864325843,1.07220795687463,0,1.36023555307363,2.08370226891451,0.244736704506468,0.179088841081487,7.72003617902431,0.877136198314828,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0.559518030877778,0.622077260032973,0,0,0,0,0,0,0,0,0,0,5.60399523799829,0,0.918736432059601,0.128458450192919,0,0,0,2.52071696221718,0.138314504928436,0.322951291263702,0,0,0.11796972334774,0,0.808679663052368,0,0,0,0,0,3.12605604493237,0,0,2.51355346568977,0.135075169236789,0,0.206686796501184,0.0634158101939068,1.09394961803644,3.28954660114309,0,0,2.04419884223352,0.535701835878287,0.336283722218824,1.21393120847326,1.59363533945908,0,0,0,1.83518279037446,0,5.55511052154651,0.778619813244484,1.56986185701028,0.314231179832004,0.280272163313789,16.4368569691709,5.18226218924691,3.34426181520935,0.285906176706625,0,0,0,0,0,0.17071847709395,8.2951159417691,2.15113679410139,0,0,1.69354820076372,2.5201755539845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| ||
|short_description=p@chr10:46992949..46993010,+ | |short_description=p@chr10:46992949..46993010,+ | ||
}} | }} |
Latest revision as of 13:51, 23 July 2015
Short description: | p@chr10:46992949..46993010, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:46992949..46993010, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.79e-09 | 253 |
kidney cell | 1.16e-07 | 17 |
kidney epithelial cell | 1.16e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 1.06e-24 | 118 |
digestive system | 6.13e-23 | 145 |
digestive tract | 6.13e-23 | 145 |
primitive gut | 6.13e-23 | 145 |
endoderm-derived structure | 1.56e-21 | 160 |
endoderm | 1.56e-21 | 160 |
presumptive endoderm | 1.56e-21 | 160 |
organ system subdivision | 8.16e-16 | 223 |
foregut | 2.64e-15 | 87 |
respiratory primordium | 9.36e-15 | 38 |
endoderm of foregut | 9.36e-15 | 38 |
larynx | 4.27e-14 | 9 |
respiratory tract | 3.20e-12 | 54 |
respiratory system | 5.48e-12 | 74 |
upper respiratory tract | 1.24e-10 | 19 |
segment of respiratory tract | 1.70e-10 | 47 |
small intestine | 4.28e-10 | 4 |
renal system | 4.73e-09 | 48 |
lung | 4.77e-09 | 22 |
respiratory tube | 4.77e-09 | 22 |
respiration organ | 4.77e-09 | 22 |
pair of lungs | 4.77e-09 | 22 |
lung primordium | 4.77e-09 | 22 |
lung bud | 4.77e-09 | 22 |
trunk region element | 9.23e-09 | 101 |
endo-epithelium | 9.28e-09 | 82 |
gastrointestinal system | 1.13e-08 | 25 |
epithelial bud | 1.61e-08 | 37 |
urinary system structure | 2.52e-08 | 47 |
intestine | 8.38e-08 | 17 |
cavitated compound organ | 3.98e-07 | 31 |
anatomical conduit | 6.69e-07 | 240 |
epithelial fold | 8.99e-07 | 47 |
developing anatomical structure | 9.99e-07 | 581 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.98e-12 | 106 |
cell type cancer | 1.59e-07 | 143 |