FFCP PHASE1:Hg19::chr1:147150847..147150854,-: Difference between revisions
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|id=chr1:147150847..147150854,-
|short_description=p@chr1:147150847..147150854,-
|description=CAGE_peak_at_chr1:147150847..147150854,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:147150847..147150854,- | |||
|coexpression_cluster_id=C839 | |||
|description=CAGE_peak_at_chr1:147150847..147150854,- | |||
|id=chr1:147150847..147150854,- | |||
|ontology_enrichment_celltype=CL:0002586!4.72e-75!3;CL:0000149!1.48e-56!4;CL:0000147!8.70e-17!14;CL:0000322!1.30e-09!3;CL:0002368!1.47e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002586;2.79e-195;3!CL:0000149;6.94e-147;4!CL:0000147;4.85e-43;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.79e-195,3;CL:0000149,6.94e-147,4;CL:0000147,4.85e-43,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3910!9.40e-14!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001781!4.72e-75!3;UBERON:0001782!4.72e-75!3;UBERON:0005424!4.72e-75!3;UBERON:0000966!1.89e-45!5;UBERON:0005388!1.89e-45!5;UBERON:0001802!1.89e-45!5;UBERON:0007625!3.79e-21!11;UBERON:0004903!9.40e-14!2;UBERON:0002173!9.40e-14!2;UBERON:0002186!9.40e-14!2;UBERON:0000019!1.45e-12!19;UBERON:0000047!1.45e-12!19;UBERON:0004088!1.45e-12!19;UBERON:0003072!1.45e-12!19;UBERON:0003071!1.45e-12!19;UBERON:0004128!1.45e-12!19;UBERON:0000970!5.70e-12!20;UBERON:0002104!1.96e-11!21;UBERON:0001456!1.96e-11!21;UBERON:0000020!1.69e-10!23;UBERON:0001032!4.35e-10!24;UBERON:0004456!4.35e-10!24;UBERON:0004821!1.30e-09!3;UBERON:0003215!1.30e-09!3;UBERON:0002299!1.30e-09!3;UBERON:0006524!1.30e-09!3;UBERON:0008874!1.30e-09!3;UBERON:0002169!1.30e-09!3;UBERON:0004894!1.30e-09!3;UBERON:0005085!1.85e-08!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;2.79e-195;3!UBERON:0001782;2.79e-195;3!UBERON:0000966;7.76e-118;5!UBERON:0005388;7.76e-118;5!UBERON:0001802;7.76e-118;5!UBERON:0007625;2.16e-54;11!UBERON:0000019;4.52e-32;19!UBERON:0000047;4.52e-32;19!UBERON:0004088;4.52e-32;19!UBERON:0010230;4.52e-32;19!UBERON:0000970;1.56e-30;20!UBERON:0002104;3.84e-29;21!UBERON:0001456;3.84e-29;21!UBERON:0000020;1.01e-26;23!UBERON:0001032;1.16e-25;24!UBERON:0004456;1.16e-25;24!UBERON:0010371;1.32e-18;31!UBERON:0000033;5.80e-13;50!UBERON:0001444;8.42e-11;48!UBERON:0004923;6.49e-08;55!UBERON:0007811;1.00e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,2.79e-195,3;UBERON:0005424,2.79e-195,3;UBERON:0001781,6.94e-147,4;UBERON:0000966,1.83e-98,6;UBERON:0005388,1.83e-98,6;UBERON:0001802,1.83e-98,6;UBERON:0007625,2.16e-54,11;UBERON:0000019,1.56e-30,20;UBERON:0000047,1.56e-30,20;UBERON:0010312,1.56e-30,20;UBERON:0004088,1.56e-30,20;UBERON:0010230,1.56e-30,20;UBERON:0003072,1.56e-30,20;UBERON:0004128,1.56e-30,20;UBERON:0003071,1.56e-30,20;UBERON:0000970,3.84e-29,21;UBERON:0002104,3.84e-29,21;UBERON:0001456,7.08e-28,22;UBERON:0000020,1.16e-25,24;UBERON:0001032,1.16e-25,24;UBERON:0004456,1.16e-25,24;UBERON:0005085,3.79e-20,31;UBERON:0001444,3.57e-13,49;UBERON:0000033,1.15e-11,56;UBERON:0000153,1.22e-10,62;UBERON:0007811,1.22e-10,62;UBERON:0003056,1.22e-10,61;UBERON:0004923,4.66e-10,66;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86 | |||
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|short_description=p@chr1:147150847..147150854,- | |||
}} | }} |
Latest revision as of 20:54, 27 July 2015
Short description: | p@chr1:147150847..147150854, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:147150847..147150854, - |
Coexpression cluster: | C839_Retinal_Mallassezderived_retina_medulla_mesothelioma_osteosarcoma_Saos2 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.79e-195 | 3 |
visual pigment cell | 6.94e-147 | 4 |
pigment cell | 4.85e-43 | 14 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 2.79e-195 | 3 |
presumptive retinal pigmented epithelium | 2.79e-195 | 3 |
layer of retina | 6.94e-147 | 4 |
retina | 1.83e-98 | 6 |
photoreceptor array | 1.83e-98 | 6 |
posterior segment of eyeball | 1.83e-98 | 6 |
pigment epithelium of eye | 2.16e-54 | 11 |
camera-type eye | 1.56e-30 | 20 |
simple eye | 1.56e-30 | 20 |
immature eye | 1.56e-30 | 20 |
ocular region | 1.56e-30 | 20 |
eyeball of camera-type eye | 1.56e-30 | 20 |
optic cup | 1.56e-30 | 20 |
optic vesicle | 1.56e-30 | 20 |
eye primordium | 1.56e-30 | 20 |
eye | 3.84e-29 | 21 |
visual system | 3.84e-29 | 21 |
face | 7.08e-28 | 22 |
sense organ | 1.16e-25 | 24 |
sensory system | 1.16e-25 | 24 |
entire sense organ system | 1.16e-25 | 24 |
ectodermal placode | 3.79e-20 | 31 |
subdivision of head | 3.57e-13 | 49 |
head | 1.15e-11 | 56 |
anterior region of body | 1.22e-10 | 62 |
craniocervical region | 1.22e-10 | 62 |
pre-chordal neural plate | 1.22e-10 | 61 |
organ component layer | 4.66e-10 | 66 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |