FFCP PHASE1:Hg19::chr4:79472785..79472796,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=306 | |EntrezGene=306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=541 | |HGNC=541 | ||
|TSSclassifier=strong | |||
|UniProt=P12429 | |UniProt=P12429 | ||
|association_with_transcript=43bp_to_NM_005139,uc003hld.2,uc003hle.2,uc010ijk.2_5end | |association_with_transcript=43bp_to_NM_005139,uc003hld.2,uc003hle.2,uc010ijk.2_5end | ||
|cluster_id=chr4:79472785..79472796,+ | |||
|description=CAGE_peak_3_at_ANXA3_5end | |description=CAGE_peak_3_at_ANXA3_5end | ||
|id=chr4:79472785..79472796,+ | |id=chr4:79472785..79472796,+ | ||
|ontology_enrichment_celltype=CL:0000077;2.86e-18;19!CL:0000076;9.97e-13;63!CL:0002139;4.67e-09;24!CL:0000213;7.84e-09;58!CL:0000215;7.84e-09;58!CL:0000071;3.58e-07;18!CL:0002076;4.64e-07;42 | |ontology_enrichment_celltype=CL:0000066!4.35e-35!254;CL:0000076!9.86e-22!62;CL:0002321!1.27e-14!248;CL:0000220!2.14e-14!246;CL:0000213!1.93e-13!57;CL:0000215!1.93e-13!57;CL:0000077!3.16e-13!19;CL:0000222!3.95e-11!119;CL:0002139!2.46e-09!24;CL:0002076!8.46e-08!43;CL:0000071!2.38e-07!18;CL:0002546!2.38e-07!18 | ||
| | |ontology_enrichment_celltype_v019=CL:0000077;2.86e-18;19!CL:0000076;9.97e-13;63!CL:0002139;4.67e-09;24!CL:0000213;7.84e-09;58!CL:0000215;7.84e-09;58!CL:0000071;3.58e-07;18!CL:0002076;4.64e-07;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000066,1.65e-41,253;CL:0000076,1.05e-25,63;CL:0000077,5.44e-18,19;CL:0000213,8.67e-17,58;CL:0000215,8.67e-17,58;CL:0002321,3.59e-15,250;CL:0000222,1.15e-09,121;CL:0002139,2.80e-09,24;CL:0002076,7.37e-09,42;CL:0002078,1.43e-07,45;CL:0000071,2.93e-07,18;CL:0002546,2.93e-07,18;CL:0002368,6.35e-07,13 | ||
|ontology_enrichment_uberon=UBERON:0000490;1.66e-08;33!UBERON:0001737;4.66e-08;9!UBERON:0001557;4.66e-08;9!UBERON:0000487;8.27e-08;22!UBERON:0004638;3.58e-07;18!UBERON:0001986;3.58e-07;18!UBERON:0004852;3.58e-07;18!UBERON:0000065;6.72e-07;44 | |ontology_enrichment_development_v019=CL:0002546;3.58e-07;18 | ||
|ontology_enrichment_disease=DOID:305!3.43e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.62e-11,106;DOID:0050687,2.95e-07,143;DOID:162,3.33e-07,235;DOID:14566,5.88e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000477!4.48e-12!286;UBERON:0000483!3.11e-10!309;UBERON:0002049!3.24e-10!79;UBERON:0007798!3.24e-10!79;UBERON:0000119!6.45e-10!312;UBERON:0004119!6.62e-09!169;UBERON:0000925!6.62e-09!169;UBERON:0006595!6.62e-09!169;UBERON:0003914!9.35e-09!118;UBERON:0004111!1.12e-08!241;UBERON:0004872!1.99e-08!84;UBERON:0000055!2.77e-08!69;UBERON:0000490!4.87e-08!138;UBERON:0001981!6.98e-08!60;UBERON:0007500!6.98e-08!60;UBERON:0004537!6.98e-08!60;UBERON:0006965!6.98e-08!60;UBERON:0000481!7.02e-08!347;UBERON:0000487!1.43e-07!22;UBERON:0001007!2.14e-07!155;UBERON:0001555!2.14e-07!155;UBERON:0007026!2.14e-07!155;UBERON:0001986!2.38e-07!18;UBERON:0004638!2.38e-07!18;UBERON:0004852!2.38e-07!18;UBERON:0001048!7.26e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0000490;1.66e-08;33!UBERON:0001737;4.66e-08;9!UBERON:0001557;4.66e-08;9!UBERON:0000487;8.27e-08;22!UBERON:0004638;3.58e-07;18!UBERON:0001986;3.58e-07;18!UBERON:0004852;3.58e-07;18!UBERON:0000065;6.72e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.62e-10,160;UBERON:0000925,8.62e-10,160;UBERON:0006595,8.62e-10,160;UBERON:0008947,4.20e-08,38;UBERON:0003258,4.20e-08,38;UBERON:0001007,4.25e-08,145;UBERON:0001555,4.25e-08,145;UBERON:0007026,4.25e-08,145;UBERON:0000487,4.73e-08,22;UBERON:0001737,6.11e-08,9;UBERON:0001048,9.36e-08,160;UBERON:0002049,2.27e-07,78;UBERON:0007798,2.27e-07,78;UBERON:0004638,2.93e-07,18;UBERON:0001986,2.93e-07,18;UBERON:0004852,2.93e-07,18;UBERON:0004921,5.95e-07,118;UBERON:0000065,6.39e-07,54 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,0,0,0,0,0,0,1.72013755551056,1.39560233594486,2.18441372130172,2.11013582582763,0.247532705920093,0.662794751455832,0,0,0.730310090387373,0.975865597581014,0.738726348460727,0,0.313454721478088,2.57612388417951,1.36874425072884,2.25976751270645,1.68109492645493,0.821005894499457,0.787107813136792,0,0,0,6.43594857135249,1.204823675113,1.84877005083394,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,1.1507695692886,0.768482119587302,2.36482229888585,0.344745680736619,0,0,0,0,0,0,0,0,3.29851300186716,0.797854630486527,3.83602275479425,0,0,0,1.7587406567972,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,4.09160197899297,0.361439152384566,0,0.289693037921647,0,0,1.41802225746102,5.09977614163897,3.07421749925941,0.654895377488563,1.45718115317017,0.370784442784429,0,0,0.132957960518865,0,0,0,3.37896092523399,3.4409383804245,4.16568601929113,3.39184765154406,0.838998872419812,3.57653454522088,3.34391946458897,2.84258435086262,4.62496141492723,6.02497102976406,0.805658634218294,2.28081631715554,1.70843440283719,2.57364156242108,3.24056779152704,2.76829157680647,1.57170560838319,1.23872628531654,3.06633274931766,0.949265659568129,1.83201743930407,1.31780417436063,3.87780264148325,0,0.496971951695318,0.633152558322899,3.44263870114369,1.14734648299525,2.12801029319014,6.16745360156538,0,0,0.622422070799533,2.2900814251847,0.326923806226917,0.151357427644931,0,0.70296429550139,0.312160076830321,0.570471821544449,0,0.23486899728753,0.161872944368132,0,0,0.982674538494144,0.206651562351531,0,0,0,0,0.841680569770331,0.500474079487857,0.277064115484183,0,0,0,1.36118619792025,0.538168907066586,0.640672166455702,0.211931901159562,0.300091096084402,0.721367704669072,0.257640540045629,0.37223371266318,0.168776332241266,0,0,0.736399189138395,1.45481451136931,0,0.403008392910561,0,4.83152132908242,6.2731607735892,4.87567812161307,0.609868530647977,1.06023814657188,0.813357600086629,1.0366105501537,0,0,0,0,0,0,0,2.24782920075703,5.05754070234305,4.82022059766964,4.19117096383097,3.92182999366331,4.50814176311084,3.23595139584395,3.13954344200554,3.46272441251751,0,0,0.8231480226628,0,0,0,0,0,2.21379189377604,3.25978839567199,2.96325770603289,2.24803506515239,6.23279628952111,0.648119116109707,0.651616610620649,0,0,0.463721619900307,4.3441216867254,1.87676382089396,1.38895653772983,0.761016608938393,0.790204397959275,4.29243081047436,0,0,0,11.2480600784132,7.55919576894868,8.22295564005842,3.04498977189684,4.65014301622339,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,1.50171528921959,0.571652865261156,0,0.87192013766656,0,0.646358578788889,0,0,0,1.04007436911366,0,0,0,1.71573592389777,0,0,0,1.42156779497018,0.791951872933429,8.13886318060882,11.3299349618038,12.3966509065751,0,0,0,0.718874566474748,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0.749007023947182,0,6.63064821497657,0.12269149171914,0,0.271265023699736,0.207970861530807,0.892144943985809,1.26161932027148,0.35142424497814,0,0,0,0,0.553107505625109,0.347534457872331,0,0,0,0,0,2.42502057157008,3.32870879020994,3.62868351995616,0.496215615637554,0.767309866440312,0.280660094433074,2.56278298511402,0,0.482561763430822,5.93672265779964,0.154209693802656,0,0.246381468041427,1.03850885836724,0.116210378459959,1.45031339509947,3.40860999515584,3.86740153530765,1.83703117063371,0.546273504020151,0.131124414959424,0.902399225814824,2.15642943892361,0.784349769176855,0,0.422206515571503,0,1.36074964221213,1.51141141271498,0,0.270946437543853,1.00337954770971,2.03901018436031,1.66215201785745,1.56712328305525,0.219259876645935,0,1.02580050046556,4.26419039409617,10.4121086292577,0.309123034943167,0,0,4.01985876597321,3.90036147621913,4.82051789532479,0.096670718292122,0.154048617114644,0.15350367472613,0,0.107420244868274,0.290033387828457,0.170453254832202,0.267096106940212,2.64455864577565,3.0750410778417,2.67986696238627,2.32662895967765,0.929691098594572,1.5740617341532,1.3940745403212,1.84820148105653,0.532306030317022,0.869932992075073,0.9266210955196,1.5743737541619,0.744316738719335,2.21465597303108,4.95638504201945,0,0.42793898803392,0.318203247925937,0,1.07923474549989,1.64722217841633,0.589062011728432,0.404364963146632,0,0.842516912477962,0.975267478179181,1.94970791705028,2.11300293513511,0,0.707027159768564,0,0,2.65375590096488,1.31535265576129,0,0,1.01455188481352,0.6196469961995,0.563391205064483,2.00775893085672,1.3754865741837,1.426684205925,0,0.211107635297664,0,0.379473173765715,0.699869440489966,2.59799704358883,2.68120910214315,5.44454924306613,0.470719003883896,0.43050537267123,0,0,1.60806380144872,0,0,0.569647187174163,0.476463550915578,0,1.29694662238543,0.540031437238115,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0.626719583092093,0,0.677167111206413,0,0,0,0.3435053447557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| ||
|short_description=p3@ANXA3 | |short_description=p3@ANXA3 | ||
}} | }} |
Latest revision as of 20:26, 18 September 2015
Short description: | p3@ANXA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ANXA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 43bp_to_NM_005139, uc003hld.2, uc003hle.2, uc010ijk.2_5end |
EntrezGene: | ANXA3 |
HGNC: | 541 |
UniProt: | P12429 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.65e-41 | 253 |
squamous epithelial cell | 1.05e-25 | 63 |
mesothelial cell | 5.44e-18 | 19 |
lining cell | 8.67e-17 | 58 |
barrier cell | 8.67e-17 | 58 |
embryonic cell | 3.59e-15 | 250 |
mesodermal cell | 1.15e-09 | 121 |
endothelial cell of vascular tree | 2.80e-09 | 24 |
endo-epithelial cell | 7.37e-09 | 42 |
meso-epithelial cell | 1.43e-07 | 45 |
blood vessel endothelial cell | 2.93e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.93e-07 | 18 |
respiratory epithelial cell | 6.35e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 8.62e-10 | 160 |
endoderm | 8.62e-10 | 160 |
presumptive endoderm | 8.62e-10 | 160 |
respiratory primordium | 4.20e-08 | 38 |
endoderm of foregut | 4.20e-08 | 38 |
digestive system | 4.25e-08 | 145 |
digestive tract | 4.25e-08 | 145 |
primitive gut | 4.25e-08 | 145 |
simple squamous epithelium | 4.73e-08 | 22 |
larynx | 6.11e-08 | 9 |
primordium | 9.36e-08 | 160 |
vasculature | 2.27e-07 | 78 |
vascular system | 2.27e-07 | 78 |
blood vessel endothelium | 2.93e-07 | 18 |
endothelium | 2.93e-07 | 18 |
cardiovascular system endothelium | 2.93e-07 | 18 |
subdivision of digestive tract | 5.95e-07 | 118 |
respiratory tract | 6.39e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.62e-11 | 106 |
cell type cancer | 2.95e-07 | 143 |
cancer | 3.33e-07 | 235 |
disease of cellular proliferation | 5.88e-07 | 239 |