FFCP PHASE1:Hg19::chr4:34336968..34336974,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:34336968..34336974,- | |||
|coexpression_cluster_id=C158 | |coexpression_cluster_id=C158 | ||
|description=CAGE_peak_at_chr4:34336968..34336974,- | |description=CAGE_peak_at_chr4:34336968..34336974,- | ||
|id=chr4:34336968..34336974,- | |id=chr4:34336968..34336974,- | ||
|ontology_enrichment_celltype=CL:0000313;1.92e-15;1!CL:0000039;4.57e-09;7!CL:0000586;4.57e-09;7!CL:1000415;1.79e-08;2!CL:0000054;2.23e-08;2!CL:0000159;2.23e-08;2!CL:0000137;2.23e-08;2!CL:0000092;2.23e-08;2 | |ontology_enrichment_celltype=CL:1000415!9.83e-14!2;CL:0000039!6.90e-09!7;CL:0000586!6.90e-09!7;CL:0000313!7.76e-08!1;CL:0002127!2.80e-07!1;CL:0000914!2.80e-07!1;CL:0000911!2.80e-07!1;CL:0000814!2.80e-07!1;CL:0002042!2.80e-07!1;CL:0002039!2.80e-07!1;CL:0002040!2.80e-07!1;CL:0002041!2.80e-07!1 | ||
| | |ontology_enrichment_celltype_v019=CL:0000313;1.92e-15;1!CL:0000039;4.57e-09;7!CL:0000586;4.57e-09;7!CL:1000415;1.79e-08;2!CL:0000054;2.23e-08;2!CL:0000159;2.23e-08;2!CL:0000137;2.23e-08;2!CL:0000092;2.23e-08;2 | ||
|ontology_enrichment_disease=DOID:1799;1.54e-15;1!DOID:10165;1.54e-15;1!DOID:1798;1.54e-15;1!DOID:0060085;1.92e-15;1!DOID:3165;1.92e-15;1!DOID:0060121;1.92e-15;1!DOID:2438;1.92e-15;1!DOID:2152;1.92e-15;1!DOID:4418;1.92e-15;1!DOID:200;2.23e-08;2!DOID:4305;2.23e-08;2 | |ontology_enrichment_celltype_v019_2=CL:0000313,2.06e-15,1;CL:0000039,4.57e-09,7;CL:0000586,4.57e-09,7;CL:1000415,1.73e-08,2;CL:0000054,2.15e-08,2;CL:0000137,2.15e-08,2;CL:0000092,2.15e-08,2;CL:0000159,2.31e-08,2 | ||
|ontology_enrichment_uberon=UBERON:0004911;1.92e-15;1!UBERON:0001282;3.41e-15;1!UBERON:0009842;3.41e-15;1!UBERON:0003704;3.41e-15;1!UBERON:0001171;3.41e-15;1!UBERON:0001172;3.41e-15;1!UBERON:0002294;5.37e-09;7!UBERON:0001173;5.37e-09;7!UBERON:0004909;2.23e-08;2 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1036!2.01e-12!8;DOID:162!7.87e-12!235;DOID:14566!1.76e-11!239;DOID:2531!2.11e-10!51;DOID:0060083!2.11e-10!51;DOID:1240!5.02e-09!39;DOID:1799!6.80e-08!1;DOID:10165!6.80e-08!1;DOID:1798!6.80e-08!1;DOID:0060085!7.26e-08!1;DOID:3165!7.26e-08!1;DOID:0060121!7.26e-08!1;DOID:2438!7.26e-08!1;DOID:4418!7.26e-08!1;DOID:2152!7.76e-08!1;DOID:2355!3.17e-07!1;DOID:3095!4.21e-07!22;DOID:2994!4.21e-07!22;DOID:0050687!5.08e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.54e-15;1!DOID:10165;1.54e-15;1!DOID:1798;1.54e-15;1!DOID:0060085;1.92e-15;1!DOID:3165;1.92e-15;1!DOID:0060121;1.92e-15;1!DOID:2438;1.92e-15;1!DOID:2152;1.92e-15;1!DOID:4418;1.92e-15;1!DOID:200;2.23e-08;2!DOID:4305;2.23e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.54e-15,1;DOID:10165,1.54e-15,1;DOID:1798,1.54e-15,1;DOID:0060085,1.78e-15,1;DOID:3165,1.78e-15,1;DOID:0060121,1.78e-15,1;DOID:2438,1.78e-15,1;DOID:4418,1.78e-15,1;DOID:2152,2.06e-15,1;DOID:0050687,6.73e-09,143;DOID:162,7.94e-09,235;DOID:14566,1.30e-08,239;DOID:200,2.15e-08,2;DOID:4305,2.15e-08,2;DOID:305,7.11e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002110!1.89e-09!3;UBERON:0006242!1.89e-09!3;UBERON:0002294!9.25e-09!7;UBERON:0001173!9.25e-09!7;UBERON:0004912!9.25e-09!7;UBERON:0004911!7.76e-08!1;UBERON:0001282!9.44e-08!1;UBERON:0009842!9.44e-08!1;UBERON:0003704!9.44e-08!1;UBERON:0001171!9.44e-08!1;UBERON:0001172!9.44e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.92e-15;1!UBERON:0001282;3.41e-15;1!UBERON:0009842;3.41e-15;1!UBERON:0003704;3.41e-15;1!UBERON:0001171;3.41e-15;1!UBERON:0001172;3.41e-15;1!UBERON:0002294;5.37e-09;7!UBERON:0001173;5.37e-09;7!UBERON:0004909;2.23e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,2.06e-15,1;UBERON:0001282,3.17e-15,1;UBERON:0009842,3.17e-15,1;UBERON:0003704,3.17e-15,1;UBERON:0001171,3.17e-15,1;UBERON:0001172,3.17e-15,1;UBERON:0004909,2.31e-08,2;UBERON:0002294,3.34e-07,9;UBERON:0001173,3.34e-07,9;UBERON:0004912,3.34e-07,9 | |||
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|short_description=p@chr4:34336968..34336974,- | |short_description=p@chr4:34336968..34336974,- | ||
}} | }} |
Latest revision as of 04:50, 30 July 2015
Short description: | p@chr4:34336968..34336974, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:34336968..34336974, - |
Coexpression cluster: | C158_adrenal_gastric_temporal_parietal_duodenum_caudate_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.06e-15 | 1 |
germ line cell | 4.57e-09 | 7 |
germ cell | 4.57e-09 | 7 |
epithelial cell of gall bladder | 1.73e-08 | 2 |
bone matrix secreting cell | 2.15e-08 | 2 |
osteocyte | 2.15e-08 | 2 |
osteoclast | 2.15e-08 | 2 |
seromucus secreting cell | 2.31e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 2.06e-15 | 1 |
intralobular bile duct | 3.17e-15 | 1 |
acinus | 3.17e-15 | 1 |
intrahepatic bile duct | 3.17e-15 | 1 |
portal lobule | 3.17e-15 | 1 |
hepatic acinus | 3.17e-15 | 1 |
epithelium of gonad | 2.31e-08 | 2 |
biliary system | 3.34e-07 | 9 |
biliary tree | 3.34e-07 | 9 |
biliary bud | 3.34e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.54e-15 | 1 |
endocrine pancreas cancer | 1.54e-15 | 1 |
pancreatic endocrine carcinoma | 1.54e-15 | 1 |
organ system benign neoplasm | 1.78e-15 | 1 |
skin benign neoplasm | 1.78e-15 | 1 |
integumentary system benign neoplasm | 1.78e-15 | 1 |
dermis tumor | 1.78e-15 | 1 |
cutaneous fibrous histiocytoma | 1.78e-15 | 1 |
ovary epithelial cancer | 2.06e-15 | 1 |
cell type cancer | 6.73e-09 | 143 |
cancer | 7.94e-09 | 235 |
disease of cellular proliferation | 1.30e-08 | 239 |
giant cell tumor | 2.15e-08 | 2 |
bone giant cell tumor | 2.15e-08 | 2 |
carcinoma | 7.11e-08 | 106 |