FFCP PHASE1:Hg19::chr22:37318624..37318635,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1439 | |EntrezGene=1439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2436 | |HGNC=2436 | ||
|TSSclassifier=strong | |||
|UniProt=B0QY07 | |UniProt=B0QY07 | ||
|association_with_transcript=-18bp_to_ENST00000421539_5end | |association_with_transcript=-18bp_to_ENST00000421539_5end | ||
|cluster_id=chr22:37318624..37318635,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_6_at_CSF2RB_5end | |description=CAGE_peak_6_at_CSF2RB_5end | ||
|id=chr22:37318624..37318635,+ | |id=chr22:37318624..37318635,+ | ||
|ontology_enrichment_celltype=CL:0002541;8.33e-85;3!CL:0000349;3.70e-14;19 | |ontology_enrichment_celltype=CL:0002541!1.02e-27!3;CL:0002616!3.10e-10!1;CL:0000864!7.55e-10!1;CL:0000091!7.55e-10!1;CL:0002537!6.31e-08!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0002541;8.33e-85;3!CL:0000349;3.70e-14;19 | ||
|ontology_enrichment_disease=DOID:178;3.16e-29;1!DOID:326;3.16e-29;1!DOID:3978;3.16e-29;1!DOID:3394;3.16e-29;1!DOID:5844;3.16e-29;1!DOID:114;2.37e-15;2!DOID:1287;2.43e-08;4 | |ontology_enrichment_celltype_v019_2=CL:0002541,7.21e-85,3;CL:0000349,3.62e-14,19 | ||
|ontology_enrichment_uberon=UBERON:0003124;8.33e-85;3!UBERON:0000920;8.33e-85;3!UBERON:0005631;3.76e-26;10!UBERON:0000158;3.76e-26;10!UBERON:0000478;2.02e-19;24!UBERON:0001987;1.76e-08;4 | |ontology_enrichment_development_v019=UBERON:0003124;8.64e-30;1 | ||
|ontology_enrichment_disease=DOID:178!2.37e-10!1;DOID:326!2.37e-10!1;DOID:3978!2.37e-10!1;DOID:3394!2.37e-10!1;DOID:5844!2.37e-10!1;DOID:3571!7.55e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:178;3.16e-29;1!DOID:326;3.16e-29;1!DOID:3978;3.16e-29;1!DOID:3394;3.16e-29;1!DOID:5844;3.16e-29;1!DOID:114;2.37e-15;2!DOID:1287;2.43e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:178,2.37e-29,1;DOID:326,2.37e-29,1;DOID:3978,2.37e-29,1;DOID:3394,2.37e-29,1;DOID:5844,2.37e-29,1;DOID:114,2.05e-15,2;DOID:1287,2.26e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.63e-39!14;UBERON:0000158!2.63e-39!14;UBERON:0003124!6.27e-32!7;UBERON:0000476!1.02e-27!3;UBERON:0000920!1.02e-27!3;UBERON:0000478!1.53e-22!24;UBERON:0004923!8.66e-14!57;UBERON:0000305!1.05e-11!7;UBERON:0004871!2.62e-10!8;UBERON:0001736!5.79e-10!1;UBERON:0006298!5.79e-10!1;UBERON:0001987!7.24e-10!4;UBERON:0004340!7.24e-10!4;UBERON:0002372!1.07e-09!1;UBERON:0001961!1.07e-09!1;UBERON:0001744!1.07e-09!1;UBERON:0001735!1.07e-09!1;UBERON:0002363!1.17e-09!1;UBERON:0007647!1.17e-09!1;UBERON:0010115!1.17e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;8.33e-85;3!UBERON:0000920;8.33e-85;3!UBERON:0005631;3.76e-26;10!UBERON:0000158;3.76e-26;10!UBERON:0000478;2.02e-19;24!UBERON:0001987;1.76e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,7.21e-85,3;UBERON:0003124,8.06e-65,7;UBERON:0005631,8.19e-33,14;UBERON:0000158,8.19e-33,14;UBERON:0000478,2.02e-19,24;UBERON:0001987,1.82e-08,4;UBERON:0004340,1.82e-08,4;UBERON:0004923,2.26e-07,66 | |||
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|short_description=p6@CSF2RB | |short_description=p6@CSF2RB | ||
}} | }} |
Latest revision as of 03:30, 20 September 2015
Short description: | p6@CSF2RB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CSF2RB_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -18bp_to_ENST00000421539_5end |
EntrezGene: | CSF2RB |
HGNC: | 2436 |
UniProt: | B0QY07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 7.21e-85 | 3 |
extraembryonic cell | 3.62e-14 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 7.21e-85 | 3 |
chorion | 8.06e-65 | 7 |
extraembryonic membrane | 8.19e-33 | 14 |
membranous layer | 8.19e-33 | 14 |
extraembryonic structure | 2.02e-19 | 24 |
placenta | 1.82e-08 | 4 |
allantois | 1.82e-08 | 4 |
organ component layer | 2.26e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.37e-29 | 1 |
ischemia | 2.37e-29 | 1 |
extrinsic cardiomyopathy | 2.37e-29 | 1 |
myocardial ischemia | 2.37e-29 | 1 |
myocardial infarction | 2.37e-29 | 1 |
heart disease | 2.05e-15 | 2 |
cardiovascular system disease | 2.26e-08 | 4 |