FFCP PHASE1:Hg19::chr1:12677633..12677640,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:12677633..12677640,-
|short_description=p19@DHRS3
|description=CAGE_peak_19_at_DHRS3_5end
|association_with_transcript=96bp_to_ENST00000376223_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9249 | |EntrezGene=9249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17693 | |HGNC=17693 | ||
|TSSclassifier=strong | |||
|UniProt=O75911 | |UniProt=O75911 | ||
|association_with_transcript=96bp_to_ENST00000376223_5end | |||
|cluster_id=chr1:12677633..12677640,- | |||
|description=CAGE_peak_19_at_DHRS3_5end | |||
|id=chr1:12677633..12677640,- | |||
|ontology_enrichment_celltype=CL:0000223!3.56e-08!59;CL:0000066!9.90e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002231;1.49e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,9.79e-09,3;CL:0000223,1.46e-08,58;CL:0000066,6.87e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.91e-07;13!UBERON:0001041;2.54e-07;30 | |||
|ontology_enrichment_disease=DOID:305!2.54e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.08e-09;14!DOID:4929;4.42e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.98e-09,14;DOID:305,5.56e-08,106;DOID:4929,4.39e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.84e-18!129;UBERON:0004185!1.84e-18!129;UBERON:0001007!1.31e-17!155;UBERON:0001555!1.31e-17!155;UBERON:0007026!1.31e-17!155;UBERON:0004119!3.40e-16!169;UBERON:0000925!3.40e-16!169;UBERON:0006595!3.40e-16!169;UBERON:0000077!6.35e-14!130;UBERON:0005911!6.31e-13!82;UBERON:0003929!4.77e-12!54;UBERON:0001041!1.77e-11!98;UBERON:0000466!2.40e-11!126;UBERON:0005177!1.39e-10!107;UBERON:0003104!9.91e-10!238;UBERON:0009142!9.91e-10!238;UBERON:0000481!1.16e-09!347;UBERON:0001048!3.23e-09!168;UBERON:0009497!5.71e-08!25;UBERON:0000015!5.71e-08!25;UBERON:0002423!5.71e-08!25;UBERON:0006235!5.71e-08!25;UBERON:0004161!5.71e-08!25;UBERON:0002100!2.80e-07!216;UBERON:0000464!3.67e-07!104;UBERON:0009569!3.76e-07!113;UBERON:0003937!5.34e-07!12;UBERON:0005399!5.34e-07!12;UBERON:0004122!5.41e-07!15;UBERON:0009856!7.49e-07!26;UBERON:0005153!8.27e-07!37;UBERON:0002417!9.83e-07!61;UBERON:0000916!9.83e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;4.15e-14;25!UBERON:0002294;4.28e-10;7!UBERON:0001173;4.28e-10;7!UBERON:0002110;6.80e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,1.34e-14,82;UBERON:0001007,3.59e-14,145;UBERON:0001555,3.59e-14,145;UBERON:0007026,3.59e-14,145;UBERON:0009497,5.28e-14,25;UBERON:0000015,5.28e-14,25;UBERON:0002423,5.28e-14,25;UBERON:0006235,5.28e-14,25;UBERON:0004161,5.28e-14,25;UBERON:0003929,5.42e-14,54;UBERON:0004119,4.96e-12,160;UBERON:0000925,4.96e-12,160;UBERON:0006595,4.96e-12,160;UBERON:0004921,4.11e-11,118;UBERON:0005177,7.67e-11,101;UBERON:0007499,6.21e-10,25;UBERON:0009856,1.81e-09,26;UBERON:0008835,2.73e-09,22;UBERON:0003894,2.73e-09,22;UBERON:0009854,8.30e-09,23;UBERON:0002110,1.32e-08,3;UBERON:0006242,1.32e-08,3;UBERON:0009569,4.44e-08,112;UBERON:0001041,7.68e-08,87;UBERON:0002294,1.29e-07,9;UBERON:0001173,1.29e-07,9;UBERON:0004912,1.29e-07,9;UBERON:0002100,1.63e-07,199;UBERON:0005172,3.98e-07,54;UBERON:0005173,3.98e-07,54 | |||
|phase1_expression=0,0.214100523890983,0.704772020479856,0,0.446961094427288,0.872338524100369,0,0,0,3.68600904752263,7.6758128476967,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0,0.305653622991805,0.738905305049512,0.708397031823113,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0.601633342410425,0,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.590129310341499,0.786021525498329,0.205601498999509,0,1.62961133316795,1.4203434172042,0,0.334231370655521,0,0.443067789167242,0.270803863765016,0.25618263945135,0,1.15106533222573,1.10540007114339,1.15921234294021,0.741432815810302,1.33770414044857,0,0,0.383220493601921,0,0.253019692019503,0.95569624297229,0.651083453856419,2.85135613334512,0.150575119077773,0.255973222308837,1.24930726552346,0.947109008176067,0,0.604820229674197,0.534880391567015,0.724122019413995,0,0.670700859703636,0.639312809217652,0.361439152384566,0,0.144846518960824,0,0,0.378139268656271,0.665188192387692,0.614843499851882,0.654895377488563,0.364295288292542,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0.529636723252875,0.286836620748814,0.354668382198357,0.560677600142307,3.20246987189115,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0.213557388818567,0,0,0,0.257640540045629,0,0,0.194874010322397,0.252433774244115,0,0.161646056818812,0,0,0,0.193260853163297,0,0.286804595389004,0,0.265059536642971,0,0,0,0,1.56449532329816,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0.217879444092406,0,0.134831308160164,0.392442930250692,0.38474715694639,0.738155454624648,0,0.4115740113314,0,10.1404027857465,1.96565443335525,6.49868897349544,0,1.47586126251736,0.343135620597051,0,0,0,0,0,0,0,0,1.05667824812239,0.144366447761074,0,0.380508304469197,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.399891964728228,0,0.502257091432126,0,0,0,0,0,0,0,0,0.788123040807709,0.646882724578552,0.77005821767849,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0.768834895534206,0,0,0,0,0,0,0,0.116210378459959,1.20859449591622,1.80455823272956,1.74953878978203,0.918515585316854,0.182091168006717,3.14698595902618,0,0.616122696835318,0,0,0.527758144464379,0,0,0,1.54227252690289,1.35473218771926,0.501689773854853,0.509752546090077,0,0.671624264166535,0,0,0.256450125116389,0.656029291399411,0.650756789328606,2.88514832613622,0,0.082509499920588,0,0,1.6068392984416,0.386682873168488,0,0,0,0,0,0,0.801288320820636,0.661139661443912,0,0.638063562472921,0.30347334256665,0,0.62962469366128,0,0,0.532306030317022,0,0.55597265731176,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0.636406495851874,0,0,0,0.117812402345686,0.606547444719948,0,0.842516912477962,0.48763373908959,0.731140468893853,1.05650146756755,0.682499557039929,0.565621727814851,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0.384888450902048,1.34060455107157,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,1.08006287447623,0,0.106824071127473,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,1.12284324244932,0.293016358543788,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.597743964753209,0.552567831062295,0,0.102268682502155,0,0,0.898683511473268,3.40140231883657,0,0.591860433821602,0,0,0.969332746095218,0.0927680981618513,0,0,0.0874599999961957,0,3.98277068999249,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,1.67308493134324,0.307801034015188,0.455768223388005,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0.632994193584081,1.95879369790977,0.565412285735763,0,0.995261931078505,0.707660516026713,1.83309043480088,0,0.617819694732514,0.208843899010911,0,0,0.234264445725339,0,0.391329237864179,0,0,3.62972148145992,0,0.189559738885464,0.150323419414493,0.414752765588989,0,0.330991955875499,0.313932918407225,0,0.569219092059585,0,2.08271686002157,1.95984794828755,0.174118413160805,0.17472666824203,0.171986032471617,0.19351266257817,0,0.0821154570532092,0.969890164884194,0,0.90392296312213,0,0.596143835108969,0.0633107959558787,1.17330829640882,2.32460578729448,1.28071796843612,0,0.288180834308212,0.229073192331831,1.20116498503375,0,0.124252535565433,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0.223171457441873,0,0,0,0.86661500537946,0.659326867049332,1.3480708770837,1.18112977817699,0,0,0,0,0,0,2.249738915515,0.77380195455795,0.0607495566580247,4.36065093879046,0.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| 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| ||
|short_description=p19@DHRS3 | |||
}} | }} |
Latest revision as of 14:26, 16 September 2015
Short description: | p19@DHRS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_DHRS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 96bp_to_ENST00000376223_5end |
EntrezGene: | DHRS3 |
HGNC: | 17693 |
UniProt: | O75911 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 9.79e-09 | 3 |
endodermal cell | 1.46e-08 | 58 |
epithelial cell | 6.87e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 1.34e-14 | 82 |
digestive system | 3.59e-14 | 145 |
digestive tract | 3.59e-14 | 145 |
primitive gut | 3.59e-14 | 145 |
epithelium of foregut-midgut junction | 5.28e-14 | 25 |
anatomical boundary | 5.28e-14 | 25 |
hepatobiliary system | 5.28e-14 | 25 |
foregut-midgut junction | 5.28e-14 | 25 |
septum transversum | 5.28e-14 | 25 |
gut epithelium | 5.42e-14 | 54 |
endoderm-derived structure | 4.96e-12 | 160 |
endoderm | 4.96e-12 | 160 |
presumptive endoderm | 4.96e-12 | 160 |
subdivision of digestive tract | 4.11e-11 | 118 |
trunk region element | 7.67e-11 | 101 |
epithelial sac | 6.21e-10 | 25 |
sac | 1.81e-09 | 26 |
hepatic diverticulum | 2.73e-09 | 22 |
liver primordium | 2.73e-09 | 22 |
digestive tract diverticulum | 8.30e-09 | 23 |
gallbladder | 1.32e-08 | 3 |
gall bladder primordium | 1.32e-08 | 3 |
subdivision of trunk | 4.44e-08 | 112 |
foregut | 7.68e-08 | 87 |
biliary system | 1.29e-07 | 9 |
biliary tree | 1.29e-07 | 9 |
biliary bud | 1.29e-07 | 9 |
trunk | 1.63e-07 | 199 |
abdomen element | 3.98e-07 | 54 |
abdominal segment element | 3.98e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.98e-09 | 14 |
carcinoma | 5.56e-08 | 106 |
tubular adenocarcinoma | 4.39e-07 | 2 |