FFCP PHASE1:Hg19::chr4:40631962..40631984,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54502 | |EntrezGene=54502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30358 | |HGNC=30358 | ||
|TSSclassifier=strong | |||
|UniProt=A0AV96 | |UniProt=A0AV96 | ||
|association_with_transcript=-79bp_to_ENST00000319592,NM_001098634,uc003gvc.2,uc003gve.2_5end | |association_with_transcript=-79bp_to_ENST00000319592,NM_001098634,uc003gvc.2,uc003gve.2_5end | ||
|cluster_id=chr4:40631962..40631984,- | |||
|description=CAGE_peak_18_at_RBM47_5end | |description=CAGE_peak_18_at_RBM47_5end | ||
|id=chr4:40631962..40631984,- | |id=chr4:40631962..40631984,- | ||
|ontology_enrichment_celltype=CL:0000039;1.03e-08;7!CL:0000586;1.03e-08;7 | |ontology_enrichment_celltype=CL:0000860!6.82e-17!45;CL:0002009!5.63e-15!65;CL:0002057!5.81e-15!42;CL:0002194!1.57e-13!63;CL:0000576!1.57e-13!63;CL:0000040!1.57e-13!63;CL:0000559!1.57e-13!63;CL:0000557!8.69e-13!71;CL:0000839!3.58e-11!70;CL:0000766!2.42e-10!76;CL:0000039!1.79e-08!7;CL:0000586!1.79e-08!7 | ||
| | |ontology_enrichment_celltype_v019=CL:0000039;1.03e-08;7!CL:0000586;1.03e-08;7 | ||
|ontology_enrichment_disease=DOID:1799;1.35e-07;1!DOID:10165;1.35e-07;1!DOID:1798;1.35e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0000039,1.03e-08,7;CL:0000586,1.03e-08,7 | ||
|ontology_enrichment_uberon=UBERON:0001829;2.39e-13;2!UBERON:0001044;7.36e-10;6!UBERON:0003293;7.36e-10;6!UBERON:0003294;7.36e-10;6!UBERON:0010047;7.36e-10;6!UBERON:0003408;7.36e-10;6!UBERON:0000167;7.36e-10;6!UBERON:0000058;1.05e-09;10!UBERON:0006947;3.99e-09;3!UBERON:0004054;3.99e-09;3!UBERON:0002365;2.10e-08;31!UBERON:0002330;2.10e-08;31!UBERON:0002423;6.49e-08;25!UBERON:0001000;1.63e-07;1!UBERON:0001831;1.63e-07;1!UBERON:0001736;1.63e-07;1!UBERON:0005352;1.63e-07;1!UBERON:0001567;1.63e-07;1!UBERON:0000998;2.03e-07;1!UBERON:0006868;2.03e-07;1!UBERON:0005904;4.82e-07;4 | |ontology_enrichment_development_v019=UBERON:0001041;1.38e-08;30!UBERON:0006298;1.63e-07;1!UBERON:0008801;1.63e-07;1!UBERON:0005754;2.03e-07;1!UBERON:0003124;4.20e-07;1 | ||
|ontology_enrichment_disease=DOID:305!1.81e-11!106;DOID:0050687!9.43e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.35e-07;1!DOID:10165;1.35e-07;1!DOID:1798;1.35e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.27e-07,1;DOID:10165,1.27e-07,1;DOID:1798,1.27e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000062!1.07e-12!511;UBERON:0002371!6.88e-11!80;UBERON:0002405!2.55e-10!115;UBERON:0001474!3.09e-10!86;UBERON:0004119!1.26e-09!169;UBERON:0000925!1.26e-09!169;UBERON:0006595!1.26e-09!169;UBERON:0001007!4.74e-09!155;UBERON:0001555!4.74e-09!155;UBERON:0007026!4.74e-09!155;UBERON:0000922!7.89e-09!612;UBERON:0000466!8.22e-09!126;UBERON:0002390!1.10e-08!102;UBERON:0003061!1.10e-08!102;UBERON:0000468!1.21e-08!659;UBERON:0002193!3.48e-08!112;UBERON:0000077!3.88e-08!130;UBERON:0004921!8.97e-08!129;UBERON:0004185!8.97e-08!129;UBERON:0004765!9.90e-08!101;UBERON:0001434!9.90e-08!101;UBERON:0002050!1.18e-07!605;UBERON:0005423!1.18e-07!605;UBERON:0000464!1.73e-07!104;UBERON:0000467!1.75e-07!625;UBERON:0000480!2.06e-07!626;UBERON:0000923!2.62e-07!604;UBERON:0005291!2.62e-07!604;UBERON:0006598!2.62e-07!604;UBERON:0002532!2.62e-07!604;UBERON:0003135!3.15e-07!11;UBERON:0000344!4.50e-07!12;UBERON:0001041!4.92e-07!98;UBERON:0000926!7.74e-07!448;UBERON:0004120!7.74e-07!448;UBERON:0006603!7.74e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.39e-13;2!UBERON:0001044;7.36e-10;6!UBERON:0003293;7.36e-10;6!UBERON:0003294;7.36e-10;6!UBERON:0010047;7.36e-10;6!UBERON:0003408;7.36e-10;6!UBERON:0000167;7.36e-10;6!UBERON:0000058;1.05e-09;10!UBERON:0006947;3.99e-09;3!UBERON:0004054;3.99e-09;3!UBERON:0002365;2.10e-08;31!UBERON:0002330;2.10e-08;31!UBERON:0002423;6.49e-08;25!UBERON:0001000;1.63e-07;1!UBERON:0001831;1.63e-07;1!UBERON:0001736;1.63e-07;1!UBERON:0005352;1.63e-07;1!UBERON:0001567;1.63e-07;1!UBERON:0000998;2.03e-07;1!UBERON:0006868;2.03e-07;1!UBERON:0005904;4.82e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.26e-13,2;UBERON:0002530,3.61e-10,59;UBERON:0001044,7.16e-10,6;UBERON:0003293,7.16e-10,6;UBERON:0003294,7.16e-10,6;UBERON:0010047,7.16e-10,6;UBERON:0000167,7.16e-10,6;UBERON:0005911,1.71e-09,82;UBERON:0006947,3.92e-09,3;UBERON:0004054,3.92e-09,3;UBERON:0001041,8.03e-09,87;UBERON:0002365,1.63e-08,31;UBERON:0002330,1.63e-08,31;UBERON:0001048,3.39e-08,160;UBERON:0001007,3.68e-08,145;UBERON:0001555,3.68e-08,145;UBERON:0007026,3.68e-08,145;UBERON:0004119,4.15e-08,160;UBERON:0000925,4.15e-08,160;UBERON:0006595,4.15e-08,160;UBERON:0009497,7.26e-08,25;UBERON:0000015,7.26e-08,25;UBERON:0002423,7.26e-08,25;UBERON:0006235,7.26e-08,25;UBERON:0004161,7.26e-08,25;UBERON:0007499,9.27e-08,25;UBERON:0001831,1.54e-07,1;UBERON:0001567,1.54e-07,1;UBERON:0008801,1.54e-07,1;UBERON:0001736,1.63e-07,1;UBERON:0006298,1.63e-07,1;UBERON:0001000,1.74e-07,1;UBERON:0005352,1.74e-07,1;UBERON:0000998,1.85e-07,1;UBERON:0006868,1.85e-07,1;UBERON:0009856,1.93e-07,26;UBERON:0003929,2.27e-07,54;UBERON:0007023,2.27e-07,114;UBERON:0005177,3.01e-07,101;UBERON:0005904,4.76e-07,4;UBERON:0004921,7.37e-07,118 | |||
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| ||
|short_description=p18@RBM47 | |short_description=p18@RBM47 | ||
}} | }} |
Latest revision as of 18:52, 17 September 2015
Short description: | p18@RBM47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_RBM47_5end |
Coexpression cluster: | NA |
Association with transcript: | -79bp_to_ENST00000319592, NM_001098634, uc003gvc.2, uc003gve.2_5end |
EntrezGene: | RBM47 |
HGNC: | 30358 |
UniProt: | A0AV96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.03e-08 | 7 |
germ cell | 1.03e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.27e-07 | 1 |
endocrine pancreas cancer | 1.27e-07 | 1 |
pancreatic endocrine carcinoma | 1.27e-07 | 1 |