FFCP PHASE1:Hg19::chr1:209826442..209826464,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:209826442..209826464,- | |||
|coexpression_cluster_id=C2562 | |coexpression_cluster_id=C2562 | ||
|description=CAGE_peak_at_chr1:209826442..209826464,- | |description=CAGE_peak_at_chr1:209826442..209826464,- | ||
|id=chr1:209826442..209826464,- | |id=chr1:209826442..209826464,- | ||
|ontology_enrichment_celltype=CL:0002076;2.37e-27;42!CL:0002368;5.85e-20;13!CL:0002251;1.24e-13;20!CL:0002202;2.96e-13;9!CL:0002632;2.96e-13;9!CL:0002159;1.03e-12;14!CL:1000507;4.49e-11;10!CL:1000494;4.49e-11;10!CL:0000244;1.30e-09;4!CL:0000731;1.30e-09;4!CL:1000497;4.33e-09;17!CL:0002518;4.33e-09;17!CL:1000449;1.02e-08;15!CL:0000349;1.53e-08;19!CL:0002621;1.13e-07;3!CL:0002166;4.22e-07;3!CL:0000307;4.48e-07;3!CL:0002328;5.97e-07;3!CL:0002231;9.64e-07;3 | |ontology_enrichment_celltype=CL:0000066!2.86e-34!254;CL:0002076!1.27e-21!43;CL:0000223!4.36e-16!59;CL:0002368!3.60e-12!13;CL:0000063!1.03e-09!578;CL:0002159!2.69e-08!13;CL:0002202!3.24e-08!9;CL:0002632!3.24e-08!9;CL:0002251!4.80e-08!21 | ||
| | |ontology_enrichment_celltype_v019=CL:0002076;2.37e-27;42!CL:0002368;5.85e-20;13!CL:0002251;1.24e-13;20!CL:0002202;2.96e-13;9!CL:0002632;2.96e-13;9!CL:0002159;1.03e-12;14!CL:1000507;4.49e-11;10!CL:1000494;4.49e-11;10!CL:0000244;1.30e-09;4!CL:0000731;1.30e-09;4!CL:1000497;4.33e-09;17!CL:0002518;4.33e-09;17!CL:1000449;1.02e-08;15!CL:0000349;1.53e-08;19!CL:0002621;1.13e-07;3!CL:0002166;4.22e-07;3!CL:0000307;4.48e-07;3!CL:0002328;5.97e-07;3!CL:0002231;9.64e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0002076,1.24e-33,42;CL:0000066,3.99e-32,253;CL:0000223,2.20e-23,58;CL:0002368,5.63e-20,13;CL:0002251,1.68e-13,20;CL:0002202,3.04e-13,9;CL:0002632,3.04e-13,9;CL:0002159,8.65e-13,14;CL:1000507,3.64e-11,10;CL:1000494,3.64e-11,10;CL:0000244,1.29e-09,4;CL:0000731,1.29e-09,4;CL:1000497,3.78e-09,17;CL:0002518,3.78e-09,17;CL:1000449,8.91e-09,15;CL:0000349,1.51e-08,19;CL:0002077,8.24e-08,34;CL:0002621,1.14e-07,3;CL:0002166,4.14e-07,3;CL:0000068,4.67e-07,3;CL:0000069,4.67e-07,3;CL:0000307,4.67e-07,3;CL:0000377,4.67e-07,3;CL:0002328,6.04e-07,3;CL:0002231,9.29e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0004211;4.49e-11;10!UBERON:0009773;4.49e-11;10!UBERON:0001231;4.49e-11;10!UBERON:0004810;4.49e-11;10!UBERON:0006554;1.42e-09;30!UBERON:0001008;1.42e-09;30!UBERON:0005631;2.13e-09;10!UBERON:0000158;2.13e-09;10!UBERON:0006555;1.02e-08;15!UBERON:0004819;1.02e-08;15!UBERON:0001285;1.02e-08;15!UBERON:0007684;1.02e-08;15!UBERON:0005911;1.25e-08;36!UBERON:0000486;1.83e-08;12!UBERON:0003929;7.33e-08;7!UBERON:0001949;1.13e-07;3!UBERON:0000365;1.24e-07;5!UBERON:0005409;1.50e-07;22!UBERON:0000485;2.25e-07;7!UBERON:0007196;2.77e-07;15!UBERON:0001558;2.77e-07;15!UBERON:0004807;5.20e-07;22!UBERON:0004815;5.97e-07;3!UBERON:0002031;5.97e-07;3!UBERON:0000160;6.65e-07;17!UBERON:0003350;8.52e-07;8 | |ontology_enrichment_development_v019=CL:0000223;3.18e-13;58!CL:0000377;4.48e-07;3 | ||
|ontology_enrichment_disease=DOID:305!2.64e-18!106;DOID:0050687!6.02e-13!143;DOID:1749!2.07e-09!14;DOID:299!4.93e-08!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.94e-16!169;UBERON:0000925!1.94e-16!169;UBERON:0006595!1.94e-16!169;UBERON:0006554!5.86e-11!44;UBERON:0001007!1.42e-10!155;UBERON:0001555!1.42e-10!155;UBERON:0007026!1.42e-10!155;UBERON:0001008!1.60e-10!45;UBERON:0005631!2.39e-10!14;UBERON:0000158!2.39e-10!14;UBERON:0001004!5.06e-10!72;UBERON:0000065!5.28e-10!53;UBERON:0008947!5.30e-10!38;UBERON:0003258!5.30e-10!38;UBERON:0004921!1.07e-09!129;UBERON:0004185!1.07e-09!129;UBERON:0005153!2.61e-09!37;UBERON:0000077!1.92e-08!130;UBERON:0005911!2.32e-08!82;UBERON:0003124!9.57e-08!7;UBERON:0000062!5.06e-07!511;UBERON:0000344!6.06e-07!12;UBERON:0000365!7.27e-07!5;UBERON:0000464!9.80e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;4.49e-11;10!UBERON:0009773;4.49e-11;10!UBERON:0001231;4.49e-11;10!UBERON:0004810;4.49e-11;10!UBERON:0006554;1.42e-09;30!UBERON:0001008;1.42e-09;30!UBERON:0005631;2.13e-09;10!UBERON:0000158;2.13e-09;10!UBERON:0006555;1.02e-08;15!UBERON:0004819;1.02e-08;15!UBERON:0001285;1.02e-08;15!UBERON:0007684;1.02e-08;15!UBERON:0005911;1.25e-08;36!UBERON:0000486;1.83e-08;12!UBERON:0003929;7.33e-08;7!UBERON:0001949;1.13e-07;3!UBERON:0000365;1.24e-07;5!UBERON:0005409;1.50e-07;22!UBERON:0000485;2.25e-07;7!UBERON:0007196;2.77e-07;15!UBERON:0001558;2.77e-07;15!UBERON:0004807;5.20e-07;22!UBERON:0004815;5.97e-07;3!UBERON:0002031;5.97e-07;3!UBERON:0000160;6.65e-07;17!UBERON:0003350;8.52e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.23e-13,160;UBERON:0000925,3.23e-13,160;UBERON:0006595,3.23e-13,160;UBERON:0005631,1.89e-12,14;UBERON:0000158,1.89e-12,14;UBERON:0006554,2.44e-11,47;UBERON:0004810,3.64e-11,10;UBERON:0001008,5.46e-11,48;UBERON:0003124,2.81e-09,7;UBERON:0004211,8.91e-09,15;UBERON:0009773,8.91e-09,15;UBERON:0001231,8.91e-09,15;UBERON:0001285,8.91e-09,15;UBERON:0007684,8.91e-09,15;UBERON:0004208,8.91e-09,15;UBERON:0006555,4.14e-08,16;UBERON:0004819,4.14e-08,16;UBERON:0001949,1.14e-07,3;UBERON:0000365,1.23e-07,5;UBERON:0007196,2.81e-07,15;UBERON:0001558,2.81e-07,15;UBERON:0004815,6.04e-07,3;UBERON:0002031,6.04e-07,3;UBERON:0001007,6.43e-07,145;UBERON:0001555,6.43e-07,145;UBERON:0007026,6.43e-07,145;UBERON:0000160,7.77e-07,17;UBERON:0003350,8.74e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.21160542851358,4.18680700783456,13.3249236999405,9.75937819445278,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.57470412614962,0.787107813136792,0,0,0.154816123316076,6.43594857135249,8.433765725791,14.0506523863379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.575384784644301,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0.376484679085209,0,0.898893937780338,0.918251677112708,0,3.19668562899521,0,0,0,0.290209238628584,0.56738522469114,3.73693349397345,0,0,0,1.21079900526674,0.368277635987565,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,18.5790597029197,3.33705998505986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,5.23312862571041,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.1149973592908,39.548187485671,34.1297468512915,0.121973706129595,0,0.116193942869518,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0.473227200159376,0.168584690078102,0.482022059766964,0.220587945464788,0,0.237270619111097,0.808987848960987,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,8.11723694384549,0,10.0970262575936,17.9842805212191,10.8571290204561,12.0364978706088,0,0,1.44331342025273,0,0,0,0,0,1.58040879591855,0.858486162094873,0,0,0,6.56136837907439,18.4780341018745,12.1926583628452,2.32852159027406,2.03443756959773,15.3353071666084,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,2.99161459204025,6.21623270154053,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,3.63753085735511,3.32870879020994,2.41912234663744,0,0,0,0,0,0,0,0,0,0,0,0,5.92211302998949,10.0253235151642,5.98526428083326,0,0,0.131124414959424,8.57279264524082,3.31165949548983,2.35304930753057,4.38417673959782,2.95544560900052,0,0.170093705276516,0,0,0,0,16.0572052018374,14.959368160717,1.79099803777743,0,0,0,0,0,0.103041011647722,0,0,4.01985876597321,1.95018073810956,0,0,0,0,0,0,0,0,0,10.5782345831026,5.76570202095319,25.0120916489385,2.52894452138875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37132380711955,10.0545341330368,15.2447378805852,0.282431402330337,31.4268922049998,28.6401508634963,23.9452282909805,65.4711690589834,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0.222886768554957,0,26.978126775359,0.890894042497916,22.7298919553432,0,0,0,0.16480387422676,0,0,0.276283915531148,0.755798243562828,0,0.369254416383208,0,1.79736702294654,0.895105873378046,0,0.197286811273867,0,0,0,0,0,0,0,0,1.593108275997,2.79679015322043,0,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0.0769502585037971,0.113942055847001,2.07507513949254,0,0.54323685961004,16.9070614657917,1.4655614944298,9.59462596833542,0,0,0,0,0,0,0,0,5.27495161320068,3.4278889713421,14.1353071433941,0,0.995261931078505,1.68069372556344,3.05515072466813,0,0.247127877893006,0,0,0,0,0,1.9566461893209,0,0,3.62972148145992,0,0,0.300646838828985,0.414752765588989,0,0,0,0,1.70765727617876,0,0.694238953340524,0.587954384486266,0.435296032902013,0,0,0.580537987734511,1.82723292715464,1.14961639874493,0,0,0,3.83717389010903,0,0,4.49768180290047,1.76349404553374,0,0,6.33997835478066,0,0,0.720273989940749,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,5.39937339723601,4.6428117273477,0,3.01891218839339,0.157611414598396,0.314727528809989,0.633602019116439,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0.226624183040251,0.146552233678082,0,0,0,0.513260513652988,2.11444506695002,0.213574825135389,0.314408610199332,0.828478110694391,0,0,0,2.55336503108073,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0.249960815924213,0,0,1.6468607378872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0.633936370075881,0,0,0.344429959321631,0,0,2.37795163123056,3.11038630016486,0,0,0,0,0.169732529954025,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94443155503077,0.471878893390961,1.10057159113007,1.38630799380406,0,0.690359926060101,0.397832444232549,0,0.80682027481408,0.781514011233092,0.261906694481422,0,7.54066039706931,0,0,0,0,0,0,0,0,3.19406069098988,0,0,0,0,0.975726071789027,0,0.342976018874837,0,0,0.709163045303809,0.556157009460346,0.156986185701028,0,2.24217730651031,0,1.51149313853035,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3746412112643,0.62041277132864,0,0.559277158988962,1.27595303699816,0.609589624911347,0,0,0,0,0,0,0,0.45178432815584,0,0,4.24457869593696,13.7692523117493,0,0,0,0,0,0,0,0,0,0,0.535661815816973,6.70500256259814,1.20362050033752,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0.61193297845189,0.534434810531121,0.827054095813604,0,0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| ||
|short_description=p@chr1:209826442..209826464,- | |short_description=p@chr1:209826442..209826464,- | ||
}} | }} |
Latest revision as of 03:21, 28 July 2015
Short description: | p@chr1:209826442..209826464, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209826442..209826464, - |
Coexpression cluster: | C2562_Urothelial_Gingival_Keratinocyte_Mammary_Bronchial_Small_Mallassezderived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.24e-33 | 42 |
epithelial cell | 3.99e-32 | 253 |
endodermal cell | 2.20e-23 | 58 |
respiratory epithelial cell | 5.63e-20 | 13 |
epithelial cell of alimentary canal | 1.68e-13 | 20 |
epithelial cell of tracheobronchial tree | 3.04e-13 | 9 |
epithelial cell of lower respiratory tract | 3.04e-13 | 9 |
general ecto-epithelial cell | 8.65e-13 | 14 |
kidney tubule cell | 3.64e-11 | 10 |
nephron tubule epithelial cell | 3.64e-11 | 10 |
transitional epithelial cell | 1.29e-09 | 4 |
urothelial cell | 1.29e-09 | 4 |
kidney cell | 3.78e-09 | 17 |
kidney epithelial cell | 3.78e-09 | 17 |
epithelial cell of nephron | 8.91e-09 | 15 |
extraembryonic cell | 1.51e-08 | 19 |
ecto-epithelial cell | 8.24e-08 | 34 |
gingival epithelial cell | 1.14e-07 | 3 |
epithelial cell of Malassez | 4.14e-07 | 3 |
duct epithelial cell | 4.67e-07 | 3 |
branched duct epithelial cell | 4.67e-07 | 3 |
tracheal epithelial cell | 4.67e-07 | 3 |
tracheoblast | 4.67e-07 | 3 |
bronchial epithelial cell | 6.04e-07 | 3 |
epithelial cell of prostate | 9.29e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.23e-13 | 160 |
endoderm | 3.23e-13 | 160 |
presumptive endoderm | 3.23e-13 | 160 |
extraembryonic membrane | 1.89e-12 | 14 |
membranous layer | 1.89e-12 | 14 |
urinary system structure | 2.44e-11 | 47 |
nephron tubule epithelium | 3.64e-11 | 10 |
renal system | 5.46e-11 | 48 |
chorion | 2.81e-09 | 7 |
nephron epithelium | 8.91e-09 | 15 |
renal tubule | 8.91e-09 | 15 |
nephron tubule | 8.91e-09 | 15 |
nephron | 8.91e-09 | 15 |
uriniferous tubule | 8.91e-09 | 15 |
nephrogenic mesenchyme | 8.91e-09 | 15 |
excretory tube | 4.14e-08 | 16 |
kidney epithelium | 4.14e-08 | 16 |
gingival epithelium | 1.14e-07 | 3 |
urothelium | 1.23e-07 | 5 |
tracheobronchial tree | 2.81e-07 | 15 |
lower respiratory tract | 2.81e-07 | 15 |
lower respiratory tract epithelium | 6.04e-07 | 3 |
epithelium of bronchus | 6.04e-07 | 3 |
digestive system | 6.43e-07 | 145 |
digestive tract | 6.43e-07 | 145 |
primitive gut | 6.43e-07 | 145 |
intestine | 7.77e-07 | 17 |
epithelium of mucosa | 8.74e-07 | 8 |