FFCP PHASE1:Hg19::chr11:47279248..47279264,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10062 | |EntrezGene=10062 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7966 | |HGNC=7966 | ||
|TSSclassifier=strong | |||
|UniProt=F8WEY6,C9JCS0 | |UniProt=F8WEY6,C9JCS0 | ||
|association_with_transcript=0bp_to_ENST00000419652,ENST00000449369,ENST00000486991_5end | |association_with_transcript=0bp_to_ENST00000419652,ENST00000449369,ENST00000486991_5end | ||
|cluster_id=chr11:47279248..47279264,+ | |||
|description=CAGE_peak_3_at_NR1H3_5end | |description=CAGE_peak_3_at_NR1H3_5end | ||
|id=chr11:47279248..47279264,+ | |id=chr11:47279248..47279264,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002107;3.50e-09;19!UBERON:0006925;3.50e-09;19!UBERON:0002423;5.32e-07;25!UBERON:0011135;6.73e-07;5!UBERON:0002216;6.73e-07;5!UBERON:0011134;6.73e-07;5!UBERON:0002209;6.73e-07;5!UBERON:0002213;6.73e-07;5!UBERON:0007844;6.73e-07;5!UBERON:0011138;6.73e-07;5!UBERON:0001130;6.73e-07;5!UBERON:0001066;6.73e-07;5!UBERON:0001468;6.73e-07;5 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.99e-19!347;UBERON:0003104!6.64e-17!238;UBERON:0009142!6.64e-17!238;UBERON:0004921!3.57e-15!129;UBERON:0004185!3.57e-15!129;UBERON:0001007!7.81e-14!155;UBERON:0001555!7.81e-14!155;UBERON:0007026!7.81e-14!155;UBERON:0004119!5.17e-12!169;UBERON:0000925!5.17e-12!169;UBERON:0006595!5.17e-12!169;UBERON:0000077!6.61e-12!130;UBERON:0000468!5.95e-11!659;UBERON:0005256!7.01e-11!143;UBERON:0002100!1.27e-10!216;UBERON:0000062!4.13e-10!511;UBERON:0001041!4.61e-10!98;UBERON:0000475!1.10e-09!365;UBERON:0000922!3.57e-09!612;UBERON:0001048!5.15e-09!168;UBERON:0002050!1.73e-08!605;UBERON:0005423!1.73e-08!605;UBERON:0000467!2.18e-08!625;UBERON:0000923!2.61e-08!604;UBERON:0005291!2.61e-08!604;UBERON:0006598!2.61e-08!604;UBERON:0002532!2.61e-08!604;UBERON:0000480!3.14e-08!626;UBERON:0000926!3.65e-08!448;UBERON:0004120!3.65e-08!448;UBERON:0006603!3.65e-08!448;UBERON:0000466!8.74e-08!126;UBERON:0002107!4.99e-07!19;UBERON:0006925!4.99e-07!19;UBERON:0008836!4.99e-07!19;UBERON:0000477!6.57e-07!286;UBERON:0005177!6.93e-07!107;UBERON:0009854!8.05e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.50e-09;19!UBERON:0006925;3.50e-09;19!UBERON:0002423;5.32e-07;25!UBERON:0011135;6.73e-07;5!UBERON:0002216;6.73e-07;5!UBERON:0011134;6.73e-07;5!UBERON:0002209;6.73e-07;5!UBERON:0002213;6.73e-07;5!UBERON:0007844;6.73e-07;5!UBERON:0011138;6.73e-07;5!UBERON:0001130;6.73e-07;5!UBERON:0001066;6.73e-07;5!UBERON:0001468;6.73e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.08e-15,118;UBERON:0001007,4.18e-13,145;UBERON:0001555,4.18e-13,145;UBERON:0007026,4.18e-13,145;UBERON:0003104,2.20e-12,160;UBERON:0009142,2.20e-12,160;UBERON:0004119,9.90e-12,160;UBERON:0000925,9.90e-12,160;UBERON:0006595,9.90e-12,160;UBERON:0005256,1.74e-10,122;UBERON:0001041,2.02e-09,87;UBERON:0002107,3.23e-09,19;UBERON:0006925,3.23e-09,19;UBERON:0008836,3.23e-09,19;UBERON:0002100,9.77e-09,199;UBERON:0009854,5.83e-08,23;UBERON:0005177,1.78e-07,101;UBERON:0008835,1.98e-07,22;UBERON:0003894,1.98e-07,22;UBERON:0011216,2.59e-07,223;UBERON:0009497,6.21e-07,25;UBERON:0000015,6.21e-07,25;UBERON:0002423,6.21e-07,25;UBERON:0006235,6.21e-07,25;UBERON:0004161,6.21e-07,25;UBERON:0011135,6.49e-07,5;UBERON:0002216,6.49e-07,5;UBERON:0011134,6.49e-07,5;UBERON:0002209,6.49e-07,5;UBERON:0002213,6.49e-07,5;UBERON:0005856,6.49e-07,5;UBERON:0005866,6.49e-07,5;UBERON:0005863,6.49e-07,5;UBERON:0007844,6.49e-07,5;UBERON:0011138,6.49e-07,5;UBERON:0001130,6.49e-07,5;UBERON:0001066,6.49e-07,5;UBERON:0001468,6.49e-07,5 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,1.0007329835313,3.12872766099101,0,2.53299878168311,6.31719873426831,9.66386824339403,0.737201809504527,3.48900583986214,0.655324116390517,0.263766978228454,4.08428964768154,3.31397375727916,0,0.602694528023977,1.46062018077475,0,0.738726348460727,1.63200552995402,1.88072832886853,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,1.79132379391939,0.647787332037959,0.257575567634187,0.290796477559129,0.755751887377619,0.242584061187816,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0.300353785683013,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,3.35350429851818,1.66221330396589,0,1.00267582127178,0.434539556882471,0,0,0.472674085820339,0.886917589850256,0.263504357079378,1.76821751921912,0.728590576585084,0,0.324547393654683,0,0.531831842075461,0,0,0,0,2.58070378531837,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43418310374407,1.06400514659507,0.560677600142307,0,0.49333509683432,1.55605517699883,0.269421344139376,0.653847612453835,7.56787138224657,4.60940739583999,4.45210720484214,5.30672130611545,3.99330275081114,2.69007624993242,0.587172493218824,0.323745888736263,0.140450806702248,1.22492502752936,0.245668634623536,1.96318984233954,0,0.741800787835671,4.55080680969013,5.74894513452991,0.505008341862199,0.625592599359821,0.554128230968366,0,0.612975591598039,1.35214253015937,0.340296549480063,0,1.2813443329114,0,0,0.92747276314595,0.515281080091258,0.558350568994769,0.168776332241266,0.0974370051611986,0,0.920498986422993,3.87950536365149,0,0.10075209822764,0.508681776931463,0,0.272746120590835,0,0.731842236777572,0.265059536642971,0.464775771478074,0.414644220061482,0,0.36497735907583,0,0.643240938192885,0,1.39310378409594,5.77503585335668,1.0647612003586,2.36018566109342,2.16909926895134,0.882351781859152,1.96091499683166,1.89816495288877,1.21348177344148,2.5508790466295,1.92373578473195,0,1.40241773803446,2.8810180793198,5.88034845542168,13.9430538304014,0.982827216677626,10.6342183202653,0,3.19769940212095,0.343135620597051,0,1.1240175325762,0,0,1.3032332212413,4.15973914111831,0,0.695582429850461,0.234817388471643,0.577465791044295,0.462985512576611,0.380508304469197,0.790204397959275,0,0,1.17002132569619,0.743155811443641,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.126995788584338,0,0,5.13217338068116,0.411309970813294,0.600686115687835,0.285826432630578,2.01835951821649,4.3596006883328,0.4400297149257,0.129271715757778,46.4953379607447,1.690605505112,3.98907174877306,1.04007436911366,2.31486636835928,1.41849132023278,0.799266537048298,1.42977993658148,22.7901074264406,0,0.977208552881205,1.06617584622764,0.791951872933429,0,0,0,1.2162378064119,1.00451418286425,2.10833939483032,0,2.29723871668228,0,0,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,4.9076596687656,3.50119364741774,3.7977103317963,0,0,0.788512075169673,0.468565659970853,4.21324539618807,6.82222512167955,8.27784570340039,0,0,2.5196248195744,10.1816601880625,13.0394501048125,0,0,0,0,0,0.907170879989041,0,0.306923946576125,0.280660094433074,0.384417447767103,0,0.321707842287215,1.48418066444991,0.462629081407967,0.887808626565635,0.164254312027618,0,0.348631135379878,1.45031339509947,0,0.0920809889358963,0.574072240823034,0.546273504020151,2.49136388422906,0,0,1.56869953835371,0,0.105551628892876,0,0,0,1.54227252690289,0.812839312631559,1.50506932156456,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0.256450125116389,1.96808787419823,0.325378394664303,4.32772248920434,0,0.082509499920588,0,0,1.6068392984416,0.870036464629098,2.46477787383431,1.99554777143968,0.551346289938122,3.00776685631166,2.46528379654188,0.767039646744908,0.267096106940212,0,0,0,0,0,0,0.6970372701606,0.308033580176089,0,0,0.37064843820784,0.286249773483982,3.72158369359667,1.89827654831236,1.5250415513906,7.16513815671735,8.98671874871233,1.27281299170375,0.78494864019923,0.719489830333259,3.0199073270966,0.706874414074119,0.202182481573316,0,0,7.31450608634386,0.487426979262569,0,2.04749867111979,1.55545975149084,0,0,0.66343897524122,0,5.78775534266688,9.83842128069949,0,0.6196469961995,0,0.860468113224309,1.47373561519682,0,0,1.47775344708365,0.987884678879706,1.51789269506286,2.0996083214699,0,0,1.08890984861323,4.89547764039252,0.43050537267123,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0.307240764308458,0.223676107892416,0.834245708559542,0,0.278406173895242,0,0.270455678475983,0.33307196799782,0,4.86565405061372,4.24873719888493,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.398495976502139,1.38141957765574,0,0.102268682502155,0,0.311039587661807,0,0.537063524026827,0,1.38100767891707,0,0,0,0.0927680981618513,0,0,0.52475999997717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| ||
|short_description=p3@NR1H3 | |short_description=p3@NR1H3 | ||
}} | }} |
Latest revision as of 04:14, 18 September 2015
Short description: | p3@NR1H3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NR1H3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000419652, ENST00000449369, ENST00000486991_5end |
EntrezGene: | NR1H3 |
HGNC: | 7966 |
UniProt: | F8WEY6C9JCS0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data