FFCP PHASE1:Hg19::chr6:39290436..39290454,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83795 | |EntrezGene=83795 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14464 | |HGNC=14464 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-72bp_to_ENST00000437525_5end | |association_with_transcript=-72bp_to_ENST00000437525_5end | ||
|cluster_id=chr6:39290436..39290454,- | |||
|coexpression_cluster_id=C76 | |coexpression_cluster_id=C76 | ||
|description=CAGE_peak_3_at_KCNK16_5end | |description=CAGE_peak_3_at_KCNK16_5end | ||
|id=chr6:39290436..39290454,- | |id=chr6:39290436..39290454,- | ||
|ontology_enrichment_celltype=CL:0002535;4.32e-26;2 | |ontology_enrichment_celltype=CL:0002553!2.37e-29!1;CL:0002535!1.15e-15!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0002535;4.32e-26;2 | ||
|ontology_enrichment_disease=DOID:4362;2.66e-11;5 | |ontology_enrichment_celltype_v019_2=CL:0002535,4.32e-26,2 | ||
|ontology_enrichment_uberon=UBERON:0006955;4.32e-26;2!UBERON:0004801;4.32e-26;2!UBERON:0002114;9.45e-18;2!UBERON:0002108;3.26e-11;4!UBERON:0000002;1.22e-09;6!UBERON:0001560;1.22e-09;6!UBERON:0001871;2.18e-08;6 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:4362!4.79e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:4362;2.66e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.66e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0002108!1.17e-17!14;UBERON:0006955!1.15e-15!2;UBERON:0004801!1.15e-15!2;UBERON:0000341!2.37e-15!2;UBERON:0000160!8.29e-10!27;UBERON:0002114!9.51e-10!12;UBERON:0005409!8.95e-08!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;4.32e-26;2!UBERON:0004801;4.32e-26;2!UBERON:0002114;9.45e-18;2!UBERON:0002108;3.26e-11;4!UBERON:0000002;1.22e-09;6!UBERON:0001560;1.22e-09;6!UBERON:0001871;2.18e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.32e-26,2;UBERON:0004801,4.32e-26,2;UBERON:0002114,1.12e-17,2;UBERON:0002108,3.60e-11,4;UBERON:0000002,1.22e-09,6;UBERON:0001560,1.22e-09,6;UBERON:0001871,2.18e-08,6 | |||
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|short_description=p3@KCNK16 | |short_description=p3@KCNK16 | ||
}} | }} |
Latest revision as of 16:38, 18 September 2015
Short description: | p3@KCNK16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCNK16_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | -72bp_to_ENST00000437525_5end |
EntrezGene: | KCNK16 |
HGNC: | 14464 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.32e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.32e-26 | 2 |
cervix epithelium | 4.32e-26 | 2 |
duodenum | 1.12e-17 | 2 |
small intestine | 3.60e-11 | 4 |
uterine cervix | 1.22e-09 | 6 |
neck of organ | 1.22e-09 | 6 |
temporal lobe | 2.18e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.66e-11 | 5 |