FFCP PHASE1:Hg19::chr5:115782001..115782019,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:115782001..115782019,- | |||
|coexpression_cluster_id=C1950 | |coexpression_cluster_id=C1950 | ||
|description=CAGE_peak_at_chr5:115782001..115782019,- | |description=CAGE_peak_at_chr5:115782001..115782019,- | ||
|id=chr5:115782001..115782019,- | |id=chr5:115782001..115782019,- | ||
|ontology_enrichment_celltype=CL:0002322;6.32e-12;5!CL:0000313;2.49e-07;1 | |ontology_enrichment_celltype=CL:0000148!1.30e-09!10;CL:0000541!1.30e-09!10;CL:0002322!4.40e-09!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0002322;6.32e-12;5!CL:0000313;2.49e-07;1 | ||
|ontology_enrichment_disease=DOID:1799;2.49e-07;1!DOID:10165;2.49e-07;1!DOID:2152;2.49e-07;1!DOID:1798;2.49e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0002322,5.37e-12,5;CL:0000313,1.25e-07,1 | ||
|ontology_enrichment_uberon=UBERON:0002784;2.18e-14;4!UBERON:0001905;2.19e-13;2!UBERON:0002757;2.19e-13;2!UBERON:0010134;2.19e-13;2!UBERON:0005408;2.19e-13;2!UBERON:0001899;2.19e-13;2!UBERON:0002021;2.22e-11;5!UBERON:0002780;5.86e-10;41!UBERON:0001890;5.86e-10;41!UBERON:0001950;7.11e-10;20!UBERON:0002619;5.73e-09;22!UBERON:0001894;1.97e-08;7!UBERON:0002791;3.81e-08;32!UBERON:0001869;3.81e-08;32!UBERON:0000956;7.18e-08;25!UBERON:0000203;7.18e-08;25!UBERON:0002171;9.68e-08;1!UBERON:0006518;9.68e-08;1!UBERON:0008949;9.68e-08;1!UBERON:0000101;9.68e-08;1!UBERON:0002167;9.68e-08;1!UBERON:0000029;2.49e-07;1!UBERON:0004911;2.49e-07;1!UBERON:0003296;4.09e-07;4!UBERON:0010133;4.09e-07;4!UBERON:0000073;6.22e-07;53!UBERON:0002616;6.22e-07;53 | |ontology_enrichment_development_v019=UBERON:0009117;3.67e-10;10!UBERON:0005564;3.67e-10;10 | ||
|ontology_enrichment_disease=DOID:3095!4.19e-10!22;DOID:2994!4.19e-10!22 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.49e-07;1!DOID:10165;2.49e-07;1!DOID:2152;2.49e-07;1!DOID:1798;2.49e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.25e-07,1;DOID:1799,4.34e-07,1;DOID:10165,4.34e-07,1;DOID:1798,4.34e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.99e-31!57;UBERON:0005068!1.99e-31!57;UBERON:0006241!1.99e-31!57;UBERON:0007135!1.99e-31!57;UBERON:0001017!3.95e-27!82;UBERON:0002780!4.25e-27!41;UBERON:0001890!4.25e-27!41;UBERON:0006240!4.25e-27!41;UBERON:0005743!2.09e-26!86;UBERON:0002616!2.18e-26!59;UBERON:0003080!3.15e-26!42;UBERON:0000073!4.22e-26!94;UBERON:0001016!4.22e-26!94;UBERON:0000955!4.95e-23!69;UBERON:0006238!4.95e-23!69;UBERON:0002020!5.35e-23!34;UBERON:0003528!5.35e-23!34;UBERON:0001893!2.14e-22!34;UBERON:0002346!6.44e-22!90;UBERON:0002791!1.38e-21!33;UBERON:0001869!2.79e-20!32;UBERON:0003075!6.42e-20!86;UBERON:0007284!6.42e-20!86;UBERON:0007023!3.55e-18!115;UBERON:0003056!2.15e-17!61;UBERON:0000924!1.80e-14!173;UBERON:0006601!1.80e-14!173;UBERON:0000956!3.07e-13!25;UBERON:0000203!3.07e-13!25;UBERON:0004121!5.09e-13!169;UBERON:0002308!2.07e-12!9;UBERON:0000125!2.07e-12!9;UBERON:0000033!3.12e-12!123;UBERON:0002619!4.63e-12!22;UBERON:0000153!4.14e-11!129;UBERON:0007811!4.14e-11!129;UBERON:0001950!6.21e-10!20;UBERON:0009663!8.06e-10!7;UBERON:0000200!5.28e-08!6;UBERON:0000025!1.37e-07!194;UBERON:0002420!2.38e-07!9;UBERON:0007245!2.38e-07!9;UBERON:0010009!2.38e-07!9;UBERON:0010011!2.38e-07!9;UBERON:0000454!2.38e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002784;2.18e-14;4!UBERON:0001905;2.19e-13;2!UBERON:0002757;2.19e-13;2!UBERON:0010134;2.19e-13;2!UBERON:0005408;2.19e-13;2!UBERON:0001899;2.19e-13;2!UBERON:0002021;2.22e-11;5!UBERON:0002780;5.86e-10;41!UBERON:0001890;5.86e-10;41!UBERON:0001950;7.11e-10;20!UBERON:0002619;5.73e-09;22!UBERON:0001894;1.97e-08;7!UBERON:0002791;3.81e-08;32!UBERON:0001869;3.81e-08;32!UBERON:0000956;7.18e-08;25!UBERON:0000203;7.18e-08;25!UBERON:0002171;9.68e-08;1!UBERON:0006518;9.68e-08;1!UBERON:0008949;9.68e-08;1!UBERON:0000101;9.68e-08;1!UBERON:0002167;9.68e-08;1!UBERON:0000029;2.49e-07;1!UBERON:0004911;2.49e-07;1!UBERON:0003296;4.09e-07;4!UBERON:0010133;4.09e-07;4!UBERON:0000073;6.22e-07;53!UBERON:0002616;6.22e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,1.15e-14,4;UBERON:0001905,1.51e-13,2;UBERON:0002757,1.51e-13,2;UBERON:0010134,1.51e-13,2;UBERON:0005408,1.51e-13,2;UBERON:0001899,1.51e-13,2;UBERON:0002780,8.28e-13,41;UBERON:0001890,8.28e-13,41;UBERON:0003080,8.28e-13,41;UBERON:0006240,8.28e-13,41;UBERON:0000073,1.27e-11,53;UBERON:0002616,1.27e-11,53;UBERON:0002021,2.31e-11,5;UBERON:0001049,6.61e-11,56;UBERON:0005068,6.61e-11,56;UBERON:0006241,6.61e-11,56;UBERON:0007135,6.61e-11,56;UBERON:0001950,5.95e-10,20;UBERON:0001017,9.61e-10,81;UBERON:0002619,4.88e-09,22;UBERON:0001894,1.38e-08,7;UBERON:0006222,1.38e-08,7;UBERON:0001016,1.51e-08,89;UBERON:0000955,1.64e-08,68;UBERON:0006238,1.64e-08,68;UBERON:0002791,3.43e-08,32;UBERON:0001869,3.43e-08,32;UBERON:0003056,4.06e-08,61;UBERON:0000956,6.25e-08,25;UBERON:0000203,6.25e-08,25;UBERON:0002171,8.54e-08,1;UBERON:0006518,8.54e-08,1;UBERON:0008949,8.54e-08,1;UBERON:0000101,8.54e-08,1;UBERON:0002167,8.54e-08,1;UBERON:0003528,1.13e-07,34;UBERON:0002020,1.13e-07,34;UBERON:0001893,1.13e-07,34;UBERON:0004911,1.25e-07,1;UBERON:0000029,1.72e-07,1;UBERON:0010371,3.16e-07,104;UBERON:0003296,3.41e-07,4;UBERON:0010133,3.41e-07,4;UBERON:0003075,7.13e-07,82;UBERON:0007284,7.13e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547497700291537,0.125542639594803,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,3.29329006549908,0.795178609928912,1.39432731443422,2.59152637538426,0.756962552626885,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.491953754172454,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0.492663237895943,0.088048434013226,0,0,0,0.253991577168676,0.381988425558278,2.34434894420094,0,0,0.600686115687835,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18504244461122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0.868124974666461,0.885741385813839,0.120596438625408,0,0.552896299656123,1.18219047581419,0,0,0,0,0,0,0.0897576444097721,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,0.202203398942031,0.802577647298789,0.468528891450678,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,2.23073497220554,0,0,0,0,0,0,0,1.20084057741958,0.821432273351958,0,0,0,0,0.458320848023367,0,0,0,0,0.0671834724867263,0,1.16495949527454,0,0.0824158583811665,0,0,0,0.795229689809303,0.544813624446302,0.643012593860077,1.10031549277787,0.83088067605837,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.646414781807753,0.66116300871345,0,0,0,0,2.48543433208317,1.48849806543585,0,0,0,0,0,0,0,0,1.77213635993397,0.488105059607853,0.250381861413,0,0.332787154610557,0.18628920882415,0.138348634936231,0,0,1.14186133417987,0,1.40500471742064,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0.107824811396682,0.157265941855896,0.218419276384028,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0.6124909547064,0.0642292250964595,1.41696576325585,0.957803154342908,1.64093091392604,1.00828678488687,0,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,1.04762677792569,0,0,0.0675375846183947,0,1.44680757550829,0,2.18789923607288,0,0,0.351742488719241,0,2.14280734351315,1.68141861109412,0,0,0.443511850813194,0,0,0.135939465953663,0.131545547125698,0,0,0,0.314231179832004,0,0,0,0.9555033757741,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,1.90154234056247,0,0.243835849964539,0,0,0,0,0,0.795803100645473,0,1.1294608203896,0,0,0.0771741581079447,0.874238242015829,0,0,0,0.785233868459781,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0.573358332605805,0,0,0.872701380680755,0.5290268405154,0,0,0,6.81298694109426,3.05943601498347,0.633492505057185,0.407955318967927,1.06886962106224,2.38926738790597,0,0,0.535928260312357,1.65833887891756,0.724030971033267,0,0,0,0,0,0.12729431655633,0.606351566874658,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547497700291537,0.125542639594803,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,3.29329006549908,0.795178609928912,1.39432731443422,2.59152637538426,0.756962552626885,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.491953754172454,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0.492663237895943,0.088048434013226,0,0,0,0.253991577168676,0.381988425558278,2.34434894420094,0,0,0.600686115687835,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18504244461122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0.868124974666461,0.885741385813839,0.120596438625408,0,0.552896299656123,1.18219047581419,0,0,0,0,0,0,0.0897576444097721,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,0.202203398942031,0.802577647298789,0.468528891450678,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,2.23073497220554,0,0,0,0,0,0,0,1.20084057741958,0.821432273351958,0,0,0,0,0.458320848023367,0,0,0,0,0.0671834724867263,0,1.16495949527454,0,0.0824158583811665,0,0,0,0.795229689809303,0.544813624446302,0.643012593860077,1.10031549277787,0.83088067605837,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.646414781807753,0.66116300871345,0,0,0,0,2.48543433208317,1.48849806543585,0,0,0,0,0,0,0,0,1.77213635993397,0.488105059607853,0.250381861413,0,0.332787154610557,0.18628920882415,0.138348634936231,0,0,1.14186133417987,0,1.40500471742064,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0.107824811396682,0.157265941855896,0.218419276384028,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0.6124909547064,0.0642292250964595,1.41696576325585,0.957803154342908,1.64093091392604,1.00828678488687,0,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,1.04762677792569,0,0,0.0675375846183947,0,1.44680757550829,0,2.18789923607288,0,0,0.351742488719241,0,2.14280734351315,1.68141861109412,0,0,0.443511850813194,0,0,0.135939465953663,0.131545547125698,0,0,0,0.314231179832004,0,0,0,0.9555033757741,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,1.90154234056247,0,0.243835849964539,0,0,0,0,0,0.795803100645473,0,1.1294608203896,0,0,0.0771741581079447,0.874238242015829,0,0,0,0.785233868459781,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0.573358332605805,0,0,0.872701380680755,0.5290268405154,0,0,0,6.81298694109426,3.05943601498347,0.633492505057185,0.407955318967927,1.06886962106224,2.38926738790597,0,0,0.535928260312357,1.65833887891756,0.724030971033267,0,0,0,0,0,0.12729431655633,0.606351566874658,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr5:115782001..115782019,- | |short_description=p@chr5:115782001..115782019,- | ||
}} | }} |
Latest revision as of 08:55, 30 July 2015
Short description: | p@chr5:115782001..115782019, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:115782001..115782019, - |
Coexpression cluster: | C1950_testicular_H9_teratocarcinoma_Neural_iPS_small_HES3GFP |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.37e-12 | 5 |
serous secreting cell | 1.25e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.25e-07 | 1 |
islet cell tumor | 4.34e-07 | 1 |
endocrine pancreas cancer | 4.34e-07 | 1 |
pancreatic endocrine carcinoma | 4.34e-07 | 1 |