FFCP PHASE1:Hg19::chr2:9519004..9519013,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:9519004..9519013,+ | |||
|coexpression_cluster_id=C182 | |coexpression_cluster_id=C182 | ||
|description=CAGE_peak_at_chr2:9519004..9519013,+ | |description=CAGE_peak_at_chr2:9519004..9519013,+ | ||
|id=chr2:9519004..9519013,+ | |id=chr2:9519004..9519013,+ | ||
|ontology_enrichment_celltype=CL:0000239;8.99e-11;3!CL:1000615;8.99e-11;3!CL:0002306;8.99e-11;3!CL:1000497;1.09e-07;17!CL:0002518;1.09e-07;17 | |ontology_enrichment_celltype=CL:0000136!3.17e-10!15;CL:0002149!3.96e-10!6;CL:0002255!3.96e-10!6;CL:0000239!1.98e-09!3;CL:1000615!1.98e-09!3;CL:0002306!1.98e-09!3;CL:0000342!2.83e-07!1;CL:0002565!2.83e-07!1 | ||
| | |ontology_enrichment_celltype_v019=CL:0000239;8.99e-11;3!CL:1000615;8.99e-11;3!CL:0002306;8.99e-11;3!CL:1000497;1.09e-07;17!CL:0002518;1.09e-07;17 | ||
|ontology_enrichment_disease=DOID:4468;1.33e-15;2 | |ontology_enrichment_celltype_v019_2=CL:0000239,9.90e-11,3;CL:1000615,9.90e-11,3;CL:0002306,9.90e-11,3;CL:1000497,1.13e-07,17;CL:0002518,1.13e-07,17 | ||
|ontology_enrichment_uberon=UBERON:0002113;2.19e-11;24!UBERON:0011143;2.19e-11;24!UBERON:0006853;8.99e-11;3!UBERON:0007685;8.99e-11;3!UBERON:0004134;8.99e-11;3!UBERON:0000489;1.52e-09;29!UBERON:0006554;3.01e-09;30!UBERON:0001008;3.01e-09;30 | |ontology_enrichment_development_v019=UBERON:0003918;2.12e-12;10!UBERON:0007687;2.12e-12;10 | ||
|ontology_enrichment_disease=DOID:4468!9.74e-14!2;DOID:3001!3.96e-10!6 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.33e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.33e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0002113!1.80e-10!27;UBERON:0003918!1.80e-10!27;UBERON:0005095!1.80e-10!27;UBERON:0007687!1.80e-10!27;UBERON:0006853!1.98e-09!3;UBERON:0007685!1.98e-09!3;UBERON:0004134!1.98e-09!3;UBERON:0000489!1.07e-08!32;UBERON:0001896!1.23e-08!3;UBERON:0005290!1.23e-08!3;UBERON:0010096!1.23e-08!3;UBERON:0004733!5.92e-08!12;UBERON:0002028!5.92e-08!12;UBERON:0007277!5.92e-08!12;UBERON:0006554!8.07e-08!44;UBERON:0001008!1.28e-07!45;UBERON:0004732!2.37e-07!13;UBERON:0001301!2.66e-07!1;UBERON:0002506!2.83e-07!1;UBERON:0001769!2.83e-07!1;UBERON:0002298!5.04e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.19e-11;24!UBERON:0011143;2.19e-11;24!UBERON:0006853;8.99e-11;3!UBERON:0007685;8.99e-11;3!UBERON:0004134;8.99e-11;3!UBERON:0000489;1.52e-09;29!UBERON:0006554;3.01e-09;30!UBERON:0001008;3.01e-09;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,9.90e-11,3;UBERON:0007685,9.90e-11,3;UBERON:0004134,9.90e-11,3;UBERON:0002113,1.45e-10,26;UBERON:0003918,1.45e-10,26;UBERON:0011143,1.45e-10,26;UBERON:0005095,1.45e-10,26;UBERON:0007687,1.45e-10,26;UBERON:0000489,5.69e-09,31 | |||
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|short_description=p@chr2:9519004..9519013,+ | |short_description=p@chr2:9519004..9519013,+ | ||
}} | }} |
Latest revision as of 13:09, 29 July 2015
Short description: | p@chr2:9519004..9519013, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:9519004..9519013, + |
Coexpression cluster: | C182_renal_mature_mesothelioma_lung_Mammary_Adipocyte_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.90e-11 | 3 |
kidney cortex tubule cell | 9.90e-11 | 3 |
epithelial cell of proximal tubule | 9.90e-11 | 3 |
kidney cell | 1.13e-07 | 17 |
kidney epithelial cell | 1.13e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 9.90e-11 | 3 |
region of nephron tubule | 9.90e-11 | 3 |
proximal tubule | 9.90e-11 | 3 |
kidney | 1.45e-10 | 26 |
kidney mesenchyme | 1.45e-10 | 26 |
upper urinary tract | 1.45e-10 | 26 |
kidney rudiment | 1.45e-10 | 26 |
kidney field | 1.45e-10 | 26 |
cavitated compound organ | 5.69e-09 | 31 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.33e-15 | 2 |