FFCP PHASE1:Hg19::chr11:116663102..116663112,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116519 | |EntrezGene=116519 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17288 | |HGNC=17288 | ||
|TSSclassifier=strong | |||
|UniProt=C9JZZ0 | |UniProt=C9JZZ0 | ||
|association_with_transcript=14bp_to_ENST00000433069_5end | |association_with_transcript=14bp_to_ENST00000433069_5end | ||
|cluster_id=chr11:116663102..116663112,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_3_at_APOA5_5end | |description=CAGE_peak_3_at_APOA5_5end | ||
|id=chr11:116663102..116663112,- | |id=chr11:116663102..116663112,- | ||
|ontology_enrichment_celltype=CL:0000182;4.95e-38;12 | |ontology_enrichment_celltype=CL:0000181!9.00e-46!12;CL:0000417!9.00e-46!12;CL:0000668!9.00e-46!12;CL:0000414!9.00e-46!12;CL:0000412!9.00e-46!12;CL:0000182!9.00e-46!12;CL:0000223!2.03e-13!59 | ||
| | |ontology_enrichment_celltype_v019=CL:0000182;4.95e-38;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.00e-38,12;CL:0000223,2.72e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.02e-24;11!UBERON:0009497;3.01e-20;13!UBERON:0003104;3.37e-09;31!UBERON:0001041;3.37e-09;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002107;1.91e-37;19!UBERON:0006925;1.91e-37;19!UBERON:0002423;1.35e-28;25!UBERON:0002365;2.88e-22;31!UBERON:0002330;2.88e-22;31!UBERON:0002368;1.71e-18;33!UBERON:0000949;6.44e-15;43!UBERON:0005172;5.65e-09;52!UBERON:0005173;5.65e-09;52!UBERON:0002417;2.88e-08;58!UBERON:0000916;2.88e-08;58!UBERON:0002530;5.54e-08;57 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.36e-41!19;UBERON:0006925!1.36e-41!19;UBERON:0008836!1.36e-41!19;UBERON:0008835!5.85e-36!22;UBERON:0003894!5.85e-36!22;UBERON:0009854!2.09e-34!23;UBERON:0007499!1.13e-31!25;UBERON:0009497!1.13e-31!25;UBERON:0000015!1.13e-31!25;UBERON:0002423!1.13e-31!25;UBERON:0006235!1.13e-31!25;UBERON:0004161!1.13e-31!25;UBERON:0005057!1.83e-30!26;UBERON:0009856!1.83e-30!26;UBERON:0002365!1.40e-25!31;UBERON:0002330!1.40e-25!31;UBERON:0002368!1.12e-22!35;UBERON:0003929!7.71e-20!54;UBERON:0000949!1.15e-17!45;UBERON:0005172!1.82e-14!55;UBERON:0005173!1.82e-14!55;UBERON:0002530!1.73e-13!59;UBERON:0002417!4.78e-13!61;UBERON:0000916!4.78e-13!61;UBERON:0005911!4.82e-13!82;UBERON:0004921!3.66e-08!129;UBERON:0004185!3.66e-08!129;UBERON:0001041!4.16e-08!98;UBERON:0000490!1.12e-07!138;UBERON:0005177!2.04e-07!107;UBERON:0009569!5.12e-07!113;UBERON:0002405!7.83e-07!115;UBERON:0001007!9.27e-07!155;UBERON:0001555!9.27e-07!155;UBERON:0007026!9.27e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.91e-37;19!UBERON:0006925;1.91e-37;19!UBERON:0002423;1.35e-28;25!UBERON:0002365;2.88e-22;31!UBERON:0002330;2.88e-22;31!UBERON:0002368;1.71e-18;33!UBERON:0000949;6.44e-15;43!UBERON:0005172;5.65e-09;52!UBERON:0005173;5.65e-09;52!UBERON:0002417;2.88e-08;58!UBERON:0000916;2.88e-08;58!UBERON:0002530;5.54e-08;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.23e-37,19;UBERON:0006925,2.23e-37,19;UBERON:0008836,2.23e-37,19;UBERON:0008835,2.31e-32,22;UBERON:0003894,2.31e-32,22;UBERON:0009854,5.57e-31,23;UBERON:0007499,1.51e-28,25;UBERON:0009497,1.51e-28,25;UBERON:0000015,1.51e-28,25;UBERON:0002423,1.51e-28,25;UBERON:0006235,1.51e-28,25;UBERON:0004161,1.51e-28,25;UBERON:0009856,1.81e-27,26;UBERON:0002365,4.02e-23,31;UBERON:0002330,4.02e-23,31;UBERON:0002368,1.55e-20,35;UBERON:0000949,4.53e-16,45;UBERON:0003929,1.86e-13,54;UBERON:0005172,1.86e-13,54;UBERON:0005173,1.86e-13,54;UBERON:0002530,2.40e-12,59;UBERON:0002417,3.80e-12,60;UBERON:0000916,3.80e-12,60;UBERON:0005911,5.70e-09,82;UBERON:0001041,1.81e-08,87;UBERON:0005177,2.50e-07,101 | |||
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|short_description=p3@APOA5 | |short_description=p3@APOA5 | ||
}} | }} |
Latest revision as of 19:02, 15 September 2015
Short description: | p3@APOA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_APOA5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 14bp_to_ENST00000433069_5end |
EntrezGene: | APOA5 |
HGNC: | 17288 |
UniProt: | C9JZZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.00e-38 | 12 |
endodermal cell | 2.72e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.23e-37 | 19 |
digestive gland | 2.23e-37 | 19 |
liver bud | 2.23e-37 | 19 |
hepatic diverticulum | 2.31e-32 | 22 |
liver primordium | 2.31e-32 | 22 |
digestive tract diverticulum | 5.57e-31 | 23 |
epithelial sac | 1.51e-28 | 25 |
epithelium of foregut-midgut junction | 1.51e-28 | 25 |
anatomical boundary | 1.51e-28 | 25 |
hepatobiliary system | 1.51e-28 | 25 |
foregut-midgut junction | 1.51e-28 | 25 |
septum transversum | 1.51e-28 | 25 |
sac | 1.81e-27 | 26 |
exocrine gland | 4.02e-23 | 31 |
exocrine system | 4.02e-23 | 31 |
endocrine gland | 1.55e-20 | 35 |
endocrine system | 4.53e-16 | 45 |
gut epithelium | 1.86e-13 | 54 |
abdomen element | 1.86e-13 | 54 |
abdominal segment element | 1.86e-13 | 54 |
gland | 2.40e-12 | 59 |
abdominal segment of trunk | 3.80e-12 | 60 |
abdomen | 3.80e-12 | 60 |
endo-epithelium | 5.70e-09 | 82 |
foregut | 1.81e-08 | 87 |
trunk region element | 2.50e-07 | 101 |