FFCP PHASE1:Hg19::chr6:136358680..136358710,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27115 | |EntrezGene=27115 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8792 | |HGNC=8792 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-463bp_to_uc003qgr.2_5end | |association_with_transcript=-463bp_to_uc003qgr.2_5end | ||
|cluster_id=chr6:136358680..136358710,+ | |||
|description=CAGE_peak_8_at_PDE7B_5end | |description=CAGE_peak_8_at_PDE7B_5end | ||
|id=chr6:136358680..136358710,+ | |id=chr6:136358680..136358710,+ | ||
|ontology_enrichment_celltype=CL:0002139;4.01e-23;24!CL:0000071;4.24e-19;18!CL:0000115;2.97e-16;36!CL:0002543;7.98e-14;6!CL:1000413;9.79e-12;9!CL:0002494;4.47e-11;16!CL:0002078;6.32e-11;45!CL:0002618;7.69e-11;3!CL:0002595;1.01e-09;5!CL:0000359;5.08e-09;32!CL:0000213;1.02e-08;58!CL:0000215;1.02e-08;58!CL:0002544;2.15e-08;6!CL:0000737;9.32e-08;4!CL:0002549;3.51e-07;2 | |ontology_enrichment_celltype=CL:0000222!3.42e-19!119;CL:0000680!1.70e-16!57;CL:0000056!1.70e-16!57;CL:0000355!1.70e-16!57;CL:0000187!3.29e-16!54;CL:0000183!9.00e-15!59;CL:0000359!1.50e-13!32;CL:0000393!2.76e-13!60;CL:0000211!2.76e-13!60;CL:0000192!4.17e-13!42;CL:0000514!4.17e-13!42;CL:0002139!3.00e-11!24;CL:0000055!7.30e-10!180;CL:0000115!1.32e-09!35;CL:0000071!2.19e-08!18;CL:0002546!2.19e-08!18;CL:0002078!6.73e-08!44;CL:0002494!1.29e-07!16 | ||
| | |ontology_enrichment_celltype_v019=CL:0002139;4.01e-23;24!CL:0000071;4.24e-19;18!CL:0000115;2.97e-16;36!CL:0002543;7.98e-14;6!CL:1000413;9.79e-12;9!CL:0002494;4.47e-11;16!CL:0002078;6.32e-11;45!CL:0002618;7.69e-11;3!CL:0002595;1.01e-09;5!CL:0000359;5.08e-09;32!CL:0000213;1.02e-08;58!CL:0000215;1.02e-08;58!CL:0002544;2.15e-08;6!CL:0000737;9.32e-08;4!CL:0002549;3.51e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.94e-23,24;CL:0000222,3.10e-19,121;CL:0000071,4.17e-19,18;CL:0002546,4.17e-19,18;CL:0000115,8.24e-19,36;CL:0002078,3.41e-16,45;CL:0002543,7.79e-14,6;CL:0000213,2.95e-13,58;CL:0000215,2.95e-13,58;CL:1000413,9.81e-12,9;CL:0002494,5.43e-11,16;CL:0002618,7.77e-11,3;CL:0002595,6.56e-10,5;CL:0000359,6.36e-09,32;CL:0002544,1.60e-08,6;CL:0000737,9.82e-08,4;CL:0002321,1.66e-07,250;CL:0000187,1.83e-07,55;CL:0002549,2.33e-07,2;CL:0000680,6.36e-07,58;CL:0000056,6.36e-07,58;CL:0000355,6.36e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;4.24e-19;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001637;1.04e-19;42!UBERON:0003509;1.04e-19;42!UBERON:0004572;1.04e-19;42!UBERON:0004638;4.24e-19;18!UBERON:0001986;4.24e-19;18!UBERON:0004852;4.24e-19;18!UBERON:0006914;1.92e-18;25!UBERON:0000487;2.83e-18;22!UBERON:0000055;1.06e-16;65!UBERON:0007500;6.94e-16;56!UBERON:0001981;6.94e-16;56!UBERON:0004537;6.94e-16;56!UBERON:0004573;7.97e-15;33!UBERON:0004571;7.97e-15;33!UBERON:0002049;4.61e-13;75!UBERON:0007798;4.61e-13;75!UBERON:0003915;9.79e-12;9!UBERON:0004700;9.79e-12;9!UBERON:0001917;9.79e-12;9!UBERON:0003513;1.08e-10;7!UBERON:0000490;2.48e-10;33!UBERON:0004535;3.07e-10;109!UBERON:0001009;3.53e-10;112!UBERON:0003914;3.70e-10;74!UBERON:0000947;8.26e-10;21!UBERON:0010191;8.26e-10;21!UBERON:0000948;9.20e-10;22!UBERON:0003834;1.01e-09;5!UBERON:0001533;1.01e-09;5!UBERON:0001638;4.56e-09;9!UBERON:0003920;4.56e-09;9!UBERON:0004582;4.56e-09;9!UBERON:0007100;2.20e-08;25!UBERON:0000125;4.27e-08;9!UBERON:0002308;4.27e-08;9!UBERON:0001875;2.96e-07;2!UBERON:0006514;2.96e-07;2!UBERON:0005629;3.51e-07;2!UBERON:0005358;3.51e-07;2!UBERON:0001886;3.51e-07;2!UBERON:0004086;3.51e-07;2!UBERON:0005282;3.51e-07;2!UBERON:0005281;3.51e-07;2!UBERON:0009663;4.80e-07;7 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.65e-31!79;UBERON:0007798!5.65e-31!79;UBERON:0001009!5.18e-29!113;UBERON:0004535!2.20e-28!110;UBERON:0004872!6.32e-25!84;UBERON:0000477!2.08e-24!286;UBERON:0000119!6.52e-24!312;UBERON:0000025!1.35e-22!194;UBERON:0000055!1.49e-22!69;UBERON:0000483!2.96e-22!309;UBERON:0001981!1.99e-21!60;UBERON:0007500!1.99e-21!60;UBERON:0004537!1.99e-21!60;UBERON:0006965!1.99e-21!60;UBERON:0004111!1.01e-20!241;UBERON:0001637!1.21e-18!42;UBERON:0003509!1.21e-18!42;UBERON:0004572!1.21e-18!42;UBERON:0003075!9.49e-17!86;UBERON:0007284!9.49e-17!86;UBERON:0002346!3.07e-15!90;UBERON:0002616!1.09e-14!59;UBERON:0002385!1.36e-14!63;UBERON:0001015!1.36e-14!63;UBERON:0000383!1.36e-14!63;UBERON:0001134!1.62e-14!61;UBERON:0002036!1.62e-14!61;UBERON:0003082!1.62e-14!61;UBERON:0003914!3.14e-14!118;UBERON:0004573!6.35e-14!33;UBERON:0004571!6.35e-14!33;UBERON:0004290!1.93e-13!70;UBERON:0001049!2.11e-13!57;UBERON:0005068!2.11e-13!57;UBERON:0006241!2.11e-13!57;UBERON:0007135!2.11e-13!57;UBERON:0005743!1.45e-12!86;UBERON:0000490!5.20e-12!138;UBERON:0000955!6.83e-12!69;UBERON:0006238!6.83e-12!69;UBERON:0000073!8.39e-12!94;UBERON:0001016!8.39e-12!94;UBERON:0001017!1.08e-11!82;UBERON:0000475!2.14e-11!365;UBERON:0000914!2.54e-11!83;UBERON:0002329!2.54e-11!83;UBERON:0003077!2.54e-11!83;UBERON:0003059!2.54e-11!83;UBERON:0007282!2.54e-11!83;UBERON:0009618!2.54e-11!83;UBERON:0007285!2.54e-11!83;UBERON:0000486!3.98e-11!82;UBERON:0007100!1.60e-10!27;UBERON:0007023!1.74e-10!115;UBERON:0002020!2.03e-10!34;UBERON:0003528!2.03e-10!34;UBERON:0003056!2.22e-10!61;UBERON:0000948!4.30e-10!24;UBERON:0005498!4.30e-10!24;UBERON:0004140!4.30e-10!24;UBERON:0009881!4.30e-10!24;UBERON:0004141!4.30e-10!24;UBERON:0003084!4.30e-10!24;UBERON:0007005!4.30e-10!24;UBERON:0004139!4.30e-10!24;UBERON:0004291!4.30e-10!24;UBERON:0000033!7.08e-10!123;UBERON:0001893!1.04e-09!34;UBERON:0000467!1.14e-09!625;UBERON:0002200!1.17e-09!11;UBERON:0006876!1.17e-09!11;UBERON:0000468!1.38e-09!659;UBERON:0000480!1.44e-09!626;UBERON:0002791!2.09e-09!33;UBERON:0002780!3.12e-09!41;UBERON:0001890!3.12e-09!41;UBERON:0006240!3.12e-09!41;UBERON:0000153!3.20e-09!129;UBERON:0007811!3.20e-09!129;UBERON:0002308!6.17e-09!9;UBERON:0000125!6.17e-09!9;UBERON:0001869!6.68e-09!32;UBERON:0003080!7.93e-09!42;UBERON:0002420!1.03e-08!9;UBERON:0007245!1.03e-08!9;UBERON:0010009!1.03e-08!9;UBERON:0010011!1.03e-08!9;UBERON:0000454!1.03e-08!9;UBERON:0001986!2.19e-08!18;UBERON:0004638!2.19e-08!18;UBERON:0004852!2.19e-08!18;UBERON:0000481!2.23e-08!347;UBERON:0006914!3.58e-08!25;UBERON:0000947!4.41e-08!21;UBERON:0010191!4.41e-08!21;UBERON:0009663!2.20e-07!7;UBERON:0000487!2.22e-07!22;UBERON:0004121!5.41e-07!169 | |||
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| ||
|short_description=p8@PDE7B | |short_description=p8@PDE7B | ||
}} | }} |
Latest revision as of 23:49, 24 September 2015
Short description: | p8@PDE7B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PDE7B_5end |
Coexpression cluster: | NA |
Association with transcript: | -463bp_to_uc003qgr.2_5end |
EntrezGene: | PDE7B |
HGNC: | 8792 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.94e-23 | 24 |
mesodermal cell | 3.10e-19 | 121 |
blood vessel endothelial cell | 4.17e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.17e-19 | 18 |
endothelial cell | 8.24e-19 | 36 |
meso-epithelial cell | 3.41e-16 | 45 |
vein endothelial cell | 7.79e-14 | 6 |
lining cell | 2.95e-13 | 58 |
barrier cell | 2.95e-13 | 58 |
endothelial cell of artery | 9.81e-12 | 9 |
cardiocyte | 5.43e-11 | 16 |
endothelial cell of umbilical vein | 7.77e-11 | 3 |
smooth muscle cell of the subclavian artery | 6.56e-10 | 5 |
vascular associated smooth muscle cell | 6.36e-09 | 32 |
aortic endothelial cell | 1.60e-08 | 6 |
striated muscle cell | 9.82e-08 | 4 |
embryonic cell | 1.66e-07 | 250 |
muscle cell | 1.83e-07 | 55 |
fibroblast of choroid plexus | 2.33e-07 | 2 |
muscle precursor cell | 6.36e-07 | 58 |
myoblast | 6.36e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.36e-07 | 58 |