FFCP PHASE1:Hg19::chr16:4310542..4310558,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:4310542..4310558,- | |||
|description=CAGE_peak_at_chr16:4310542..4310558,- | |description=CAGE_peak_at_chr16:4310542..4310558,- | ||
|id=chr16:4310542..4310558,- | |id=chr16:4310542..4310558,- | ||
|ontology_enrichment_celltype=CL:0000167;7.68e-13;1!CL:0000164;7.68e-13;1!CL:0000502;7.68e-13;1!CL:0000172;7.68e-13;1!CL:0002553;7.68e-13;1!CL:0000173;7.68e-13;1!CL:0002363;4.69e-07;2 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000167;7.68e-13;1!CL:0000164;7.68e-13;1!CL:0000502;7.68e-13;1!CL:0000172;7.68e-13;1!CL:0002553;7.68e-13;1!CL:0000173;7.68e-13;1!CL:0002363;4.69e-07;2 | ||
|ontology_enrichment_disease=DOID:4430;7.68e-13;1 | |ontology_enrichment_celltype_v019_2=CL:0000167,6.06e-13,1;CL:0000164,6.06e-13,1;CL:0000502,6.06e-13,1;CL:0000172,6.06e-13,1;CL:0000173,6.06e-13,1;CL:0002351,6.06e-13,1;CL:0002553,6.82e-13,1;CL:0002363,5.60e-07,2;CL:0000008,5.60e-07,2 | ||
|ontology_enrichment_uberon=UBERON:0000007;8.49e-25;2!UBERON:0006947;1.74e-16;3!UBERON:0004054;1.74e-16;3!UBERON:0001301;3.76e-13;1!UBERON:0003296;6.64e-13;4!UBERON:0010133;6.64e-13;4!UBERON:0000998;7.68e-13;1!UBERON:0006868;7.68e-13;1!UBERON:0005904;1.31e-12;4!UBERON:0000160;1.01e-10;17!UBERON:0002108;1.30e-10;4!UBERON:0005409;1.95e-08;22!UBERON:0001894;9.40e-08;7!UBERON:0004921;1.41e-07;33!UBERON:0003566;4.69e-07;2!UBERON:0001777;4.69e-07;2 | |ontology_enrichment_development_v019=UBERON:0007297;3.34e-24;2!UBERON:0006242;3.76e-13;1!CL:0002351;7.68e-13;1!UBERON:0005754;7.68e-13;1!CL:0000008;4.69e-07;2 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;7.68e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,6.06e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0006947!1.62e-09!3;UBERON:0004054!1.62e-09!3;UBERON:0007023!1.89e-08!115;UBERON:0001044!8.08e-08!6;UBERON:0003293!8.08e-08!6;UBERON:0003294!8.08e-08!6;UBERON:0010047!8.08e-08!6;UBERON:0000167!8.08e-08!6;UBERON:0004921!2.73e-07!129;UBERON:0004185!2.73e-07!129;UBERON:0005904!3.29e-07!4;UBERON:0000007!4.00e-07!2;UBERON:0001007!5.76e-07!155;UBERON:0001555!5.76e-07!155;UBERON:0007026!5.76e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;8.49e-25;2!UBERON:0006947;1.74e-16;3!UBERON:0004054;1.74e-16;3!UBERON:0001301;3.76e-13;1!UBERON:0003296;6.64e-13;4!UBERON:0010133;6.64e-13;4!UBERON:0000998;7.68e-13;1!UBERON:0006868;7.68e-13;1!UBERON:0005904;1.31e-12;4!UBERON:0000160;1.01e-10;17!UBERON:0002108;1.30e-10;4!UBERON:0005409;1.95e-08;22!UBERON:0001894;9.40e-08;7!UBERON:0004921;1.41e-07;33!UBERON:0003566;4.69e-07;2!UBERON:0001777;4.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,9.02e-25,2;UBERON:0006947,1.74e-16,3;UBERON:0004054,1.74e-16,3;UBERON:0001301,3.33e-13,1;UBERON:0003296,6.84e-13,4;UBERON:0010133,6.84e-13,4;UBERON:0000998,8.64e-13,1;UBERON:0006868,8.64e-13,1;UBERON:0005904,1.31e-12,4;UBERON:0000160,9.45e-11,17;UBERON:0002108,1.33e-10,4;UBERON:0007023,4.70e-09,114;UBERON:0001894,9.56e-08,7;UBERON:0006222,9.56e-08,7;UBERON:0005409,1.68e-07,25;UBERON:0003566,5.60e-07,2;UBERON:0001777,5.60e-07,2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.412164046590889,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,1.99052386215701,1.32686346755009,0.611030144933625,0,0,0,0,0,0,0,0,0,0.789168805698781,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,2.44617335538842,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.945668487590378,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0.622077260032973,0,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,2.34454203369928,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,2.42786241694653,4.32558163567465,0,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,3.8720462293825,0,0,1.27016115057279,0,0,0,0.111855431797792,0,0.731507549893617,0,0,0,0,0.467878926924211,0,0,0.11294608203896,0.109940516745429,4.83081099413355,5.7108876999879,0.655678681511872,2.35158648180761,0,1.88541237681301,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0.471464371102113,0.860666464712116,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:4310542..4310558,- | |short_description=p@chr16:4310542..4310558,- | ||
}} | }} |
Latest revision as of 08:46, 25 July 2015
Short description: | p@chr16:4310542..4310558, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:4310542..4310558, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 6.06e-13 | 1 |
enteroendocrine cell | 6.06e-13 | 1 |
type D enteroendocrine cell | 6.06e-13 | 1 |
somatostatin secreting cell | 6.06e-13 | 1 |
pancreatic D cell | 6.06e-13 | 1 |
progenitor cell of endocrine pancreas | 6.06e-13 | 1 |
lung fibroblast | 6.82e-13 | 1 |
keratocyte | 5.60e-07 | 2 |
migratory cranial neural crest cell | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 9.02e-25 | 2 |
male genital duct | 1.74e-16 | 3 |
internal male genitalia | 1.74e-16 | 3 |
epididymis | 3.33e-13 | 1 |
gland of diencephalon | 6.84e-13 | 4 |
neuroendocrine gland | 6.84e-13 | 4 |
seminal vesicle | 8.64e-13 | 1 |
seminal fluid secreting gland | 8.64e-13 | 1 |
duct of male reproductive system | 1.31e-12 | 4 |
intestine | 9.45e-11 | 17 |
small intestine | 1.33e-10 | 4 |
adult organism | 4.70e-09 | 114 |
diencephalon | 9.56e-08 | 7 |
future diencephalon | 9.56e-08 | 7 |
gastrointestinal system | 1.68e-07 | 25 |
head connective tissue | 5.60e-07 | 2 |
substantia propria of cornea | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 6.06e-13 | 1 |