FFCP PHASE1:Hg19::chrX:123480125..123480142,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4068 | |EntrezGene=4068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10820 | |HGNC=10820 | ||
|TSSclassifier=strong | |||
|UniProt=O60880,Q6FGS6 | |UniProt=O60880,Q6FGS6 | ||
|association_with_transcript=0bp_to_NM_001114937,NM_002351_5end | |association_with_transcript=0bp_to_NM_001114937,NM_002351_5end | ||
|cluster_id=chrX:123480125..123480142,+ | |||
|coexpression_cluster_id=C386 | |coexpression_cluster_id=C386 | ||
|description=CAGE_peak_5_at_SH2D1A_5end | |description=CAGE_peak_5_at_SH2D1A_5end | ||
|id=chrX:123480125..123480142,+ | |id=chrX:123480125..123480142,+ | ||
|ontology_enrichment_celltype=CL:0000084!4.97e-15!25;CL:0000827!4.97e-15!25;CL:0000838!2.38e-14!52;CL:0000542!5.17e-14!53;CL:0000051!5.17e-14!53;CL:0000988!3.98e-13!182;CL:0000037!8.59e-11!172;CL:0000566!8.59e-11!172;CL:0002032!2.17e-10!165;CL:0000837!2.17e-10!165;CL:0000738!8.75e-09!140;CL:0000080!4.98e-07!6 | |ontology_enrichment_celltype=CL:0000084!4.97e-15!25;CL:0000827!4.97e-15!25;CL:0000838!2.38e-14!52;CL:0000542!5.17e-14!53;CL:0000051!5.17e-14!53;CL:0000988!3.98e-13!182;CL:0000037!8.59e-11!172;CL:0000566!8.59e-11!172;CL:0002032!2.17e-10!165;CL:0000837!2.17e-10!165;CL:0000738!8.75e-09!140;CL:0000080!4.98e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.70e-09;25!CL:0000771;2.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.59e-09,25;CL:0000827,1.59e-09,25;CL:0000988,1.70e-08,177;CL:0000771,3.08e-08,2;CL:0000838,6.64e-07,52;CL:0000542,9.00e-07,53;CL:0000051,9.00e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!4.52e-13!51;DOID:0060083!4.52e-13!51;DOID:1240!6.22e-09!39;DOID:1036!2.10e-08!8;DOID:0060058!7.33e-07!10 | |ontology_enrichment_disease=DOID:2531!4.52e-13!51;DOID:0060083!4.52e-13!51;DOID:1240!6.22e-09!39;DOID:1036!2.10e-08!8;DOID:0060058!7.33e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:4960;1.34e-15;1!DOID:0070004;1.34e-15;1!DOID:0060060;2.56e-15;1!DOID:0060061;2.56e-15;1!DOID:8691;2.56e-15;1!DOID:2531;2.64e-11;51!DOID:0060083;2.64e-11;51!DOID:1240;5.57e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.88e-17,51;DOID:0060083,2.88e-17,51;DOID:4960,1.16e-15,1;DOID:0070004,1.16e-15,1;DOID:0060060,1.78e-15,1;DOID:0060061,1.78e-15,1;DOID:8691,1.78e-15,1;DOID:1240,3.42e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002370!2.82e-10!4;UBERON:0005058!2.82e-10!4;UBERON:0009113!2.82e-10!4;UBERON:0003295!2.82e-10!4;UBERON:0005562!2.82e-10!4;UBERON:0004177!9.34e-10!7;UBERON:0003351!5.62e-07!6;UBERON:0000974!6.78e-07!10;UBERON:0001042!9.10e-07!10;UBERON:0009145!9.10e-07!10 | |ontology_enrichment_uberon=UBERON:0002370!2.82e-10!4;UBERON:0005058!2.82e-10!4;UBERON:0009113!2.82e-10!4;UBERON:0003295!2.82e-10!4;UBERON:0005562!2.82e-10!4;UBERON:0004177!9.34e-10!7;UBERON:0003351!5.62e-07!6;UBERON:0000974!6.78e-07!10;UBERON:0001042!9.10e-07!10;UBERON:0009145!9.10e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.06e-29;2!UBERON:0005058;8.06e-29;2!UBERON:0009113;8.06e-29;2!UBERON:0004177;3.75e-12;5!UBERON:0005057;3.75e-12;5!UBERON:0002390;2.23e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.24e-15,4;UBERON:0005058,5.24e-15,4;UBERON:0009113,5.24e-15,4;UBERON:0003295,5.24e-15,4;UBERON:0005562,5.24e-15,4;UBERON:0003351,2.52e-10,6;UBERON:0004177,5.59e-09,7;UBERON:0005057,5.59e-09,7 | |||
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| ||
|short_description=p5@SH2D1A | |short_description=p5@SH2D1A | ||
}} | }} |
Latest revision as of 08:00, 19 September 2015
Short description: | p5@SH2D1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SH2D1A_5end |
Coexpression cluster: | C386_chronic_acute_Hodgkin_NK_thymus_liver_blood |
Association with transcript: | 0bp_to_NM_001114937, NM_002351_5end |
EntrezGene: | SH2D1A |
HGNC: | 10820 |
UniProt: | O60880Q6FGS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.59e-09 | 25 |
pro-T cell | 1.59e-09 | 25 |
hematopoietic cell | 1.70e-08 | 177 |
eosinophil | 3.08e-08 | 2 |
lymphoid lineage restricted progenitor cell | 6.64e-07 | 52 |
lymphocyte | 9.00e-07 | 53 |
common lymphoid progenitor | 9.00e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.24e-15 | 4 |
hemolymphoid system gland | 5.24e-15 | 4 |
thymic region | 5.24e-15 | 4 |
pharyngeal gland | 5.24e-15 | 4 |
thymus primordium | 5.24e-15 | 4 |
pharyngeal epithelium | 2.52e-10 | 6 |
hemopoietic organ | 5.59e-09 | 7 |
immune organ | 5.59e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.88e-17 | 51 |
immune system cancer | 2.88e-17 | 51 |
bone marrow cancer | 1.16e-15 | 1 |
myeloma | 1.16e-15 | 1 |
non-Hodgkin lymphoma | 1.78e-15 | 1 |
cutaneous T cell lymphoma | 1.78e-15 | 1 |
mycosis fungoides | 1.78e-15 | 1 |
leukemia | 3.42e-09 | 39 |