FFCP PHASE1:Hg19::chr9:131755518..131755532,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23511 | |EntrezGene=23511 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17859 | |HGNC=17859 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=144bp_to_ENST00000467044_5end | |association_with_transcript=144bp_to_ENST00000467044_5end | ||
|cluster_id=chr9:131755518..131755532,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_3_at_NUP188_5end | |description=CAGE_peak_3_at_NUP188_5end | ||
|id=chr9:131755518..131755532,+ | |id=chr9:131755518..131755532,+ | ||
|ontology_enrichment_celltype=CL:0002274!2.03e-07!5;CL:0000457!2.03e-07!5;CL:0002191!2.03e-07!5;CL:0000097!2.03e-07!5;CL:0000831!2.03e-07!5;CL:0002028!2.03e-07!5 | |ontology_enrichment_celltype=CL:0002274!2.03e-07!5;CL:0000457!2.03e-07!5;CL:0002191!2.03e-07!5;CL:0000097!2.03e-07!5;CL:0000831!2.03e-07!5;CL:0002028!2.03e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;5.08e-16;5!CL:0000163;3.81e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.59e-16,5;CL:0002028,6.59e-16,5;CL:0000163,4.39e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.92e-26;3!UBERON:0003057;2.92e-26;3!UBERON:0005425;1.65e-10;1!UBERON:0006601;6.26e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002298;1.63e-36;6!UBERON:0001896;4.23e-27;3!UBERON:0005290;4.23e-27;3!UBERON:0002240;2.92e-26;3!UBERON:0005174;2.92e-26;3!UBERON:0001137;2.92e-26;3!UBERON:0004732;4.39e-24;13!UBERON:0005162;4.09e-19;2!UBERON:0000122;4.09e-19;2!UBERON:0004733;3.03e-18;12!UBERON:0002028;3.03e-18;12!UBERON:0001875;4.10e-18;2!UBERON:0006514;4.10e-18;2!UBERON:0000125;7.85e-16;9!UBERON:0002308;7.85e-16;9!UBERON:0000988;1.12e-12;3!UBERON:0000073;1.79e-12;53!UBERON:0002616;1.79e-12;53!UBERON:0009663;8.75e-12;7!UBERON:0000941;1.65e-10;1!UBERON:0001785;1.65e-10;1!UBERON:0002464;1.65e-10;1!UBERON:0004904;1.65e-10;1!UBERON:0001021;1.65e-10;1!UBERON:0001017;2.04e-10;75!UBERON:0001016;2.18e-10;83!UBERON:0002336;2.37e-10;1!UBERON:0002038;2.37e-10;1!UBERON:0011215;2.37e-10;1!UBERON:0001018;2.37e-10;1!UBERON:0009661;2.37e-10;1!UBERON:0002950;2.37e-10;1!UBERON:0002473;2.37e-10;1!UBERON:0005340;2.37e-10;1!UBERON:0003544;2.37e-10;1!UBERON:0005970;2.37e-10;1!UBERON:0002316;2.37e-10;1!UBERON:0001020;2.37e-10;1!UBERON:0001891;2.37e-10;1!UBERON:0002437;2.37e-10;1!UBERON:0002581;6.32e-10;1!UBERON:0002420;2.79e-09;9!UBERON:0007245;2.79e-09;9!UBERON:0010009;2.79e-09;9!UBERON:0010011;2.79e-09;9!UBERON:0000454;2.79e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,3.41e-36,6;UBERON:0003076,6.69e-36,15;UBERON:0003057,6.69e-36,15;UBERON:0001049,1.37e-27,56;UBERON:0005068,1.37e-27,56;UBERON:0006241,1.37e-27,56;UBERON:0007135,1.37e-27,56;UBERON:0001896,9.40e-27,3;UBERON:0005290,9.40e-27,3;UBERON:0010096,9.40e-27,3;UBERON:0002240,2.26e-26,3;UBERON:0005174,2.26e-26,3;UBERON:0001137,2.26e-26,3;UBERON:0004732,6.58e-24,13;UBERON:0001016,1.23e-21,89;UBERON:0003075,3.75e-21,82;UBERON:0007284,3.75e-21,82;UBERON:0001017,4.24e-21,81;UBERON:0002346,4.60e-20,86;UBERON:0005162,3.13e-19,2;UBERON:0000122,3.13e-19,2;UBERON:0010371,1.36e-18,104;UBERON:0001875,1.87e-18,2;UBERON:0006514,1.87e-18,2;UBERON:0004733,4.35e-18,12;UBERON:0002028,4.35e-18,12;UBERON:0007277,4.35e-18,12;UBERON:0000073,7.15e-18,53;UBERON:0002616,7.15e-18,53;UBERON:0000955,4.80e-16,68;UBERON:0006238,4.80e-16,68;UBERON:0000125,5.15e-16,9;UBERON:0002308,5.15e-16,9;UBERON:0007023,1.02e-14,114;UBERON:0010314,4.21e-14,132;UBERON:0000988,1.19e-12,3;UBERON:0009663,5.83e-12,7;UBERON:0004121,1.19e-11,171;UBERON:0000924,1.19e-11,171;UBERON:0006601,1.19e-11,171;UBERON:0000941,1.65e-10,1;UBERON:0001785,1.65e-10,1;UBERON:0002464,1.65e-10,1;UBERON:0004904,1.65e-10,1;UBERON:0001021,1.65e-10,1;UBERON:0003902,1.65e-10,1;UBERON:0005425,1.65e-10,1;UBERON:0002336,1.80e-10,1;UBERON:0011215,1.80e-10,1;UBERON:0001018,1.80e-10,1;UBERON:0002473,1.80e-10,1;UBERON:0005340,1.80e-10,1;UBERON:0003544,1.80e-10,1;UBERON:0005970,1.80e-10,1;UBERON:0002316,1.80e-10,1;UBERON:0001020,1.80e-10,1;UBERON:0002437,1.80e-10,1;UBERON:0002038,1.98e-10,1;UBERON:0009661,1.98e-10,1;UBERON:0002950,1.98e-10,1;UBERON:0001891,1.98e-10,1;UBERON:0009616,1.98e-10,1;UBERON:0010286,1.98e-10,1;UBERON:0002581,6.33e-10,1;UBERON:0002420,2.04e-09,9;UBERON:0007245,2.04e-09,9;UBERON:0010009,2.04e-09,9;UBERON:0010011,2.04e-09,9;UBERON:0000454,2.04e-09,9;UBERON:0011216,4.05e-07,223;UBERON:0002780,4.05e-07,41;UBERON:0001890,4.05e-07,41;UBERON:0003080,4.05e-07,41;UBERON:0006240,4.05e-07,41 | |||
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|short_description=p3@NUP188 | |short_description=p3@NUP188 | ||
}} | }} |
Latest revision as of 21:30, 15 September 2015
Short description: | p3@NUP188 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NUP188_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 144bp_to_ENST00000467044_5end |
EntrezGene: | NUP188 |
HGNC: | 17859 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.59e-16 | 5 |
basophil mast progenitor cell | 6.59e-16 | 5 |
endocrine cell | 4.39e-09 | 9 |