FFCP PHASE1:Hg19::chr8:57354052..57354105,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:57354052..57354105,+ | |||
|coexpression_cluster_id=C309 | |coexpression_cluster_id=C309 | ||
|description=CAGE_peak_at_chr8:57354052..57354105,+ | |description=CAGE_peak_at_chr8:57354052..57354105,+ | ||
|id=chr8:57354052..57354105,+ | |id=chr8:57354052..57354105,+ | ||
|ontology_enrichment_celltype=CL:0000153!1.57e-10!9;CL:0000447!1.57e-10!9;CL:0000667!9.49e-09!6;CL:0000058!9.49e-09!6;CL:0000138!9.49e-09!6;CL:0000055!1.67e-08!180;CL:0002556!9.35e-08!6;CL:0000499!9.95e-08!27;CL:0000135!5.21e-07!3;CL:0000386!5.21e-07!3;CL:0000388!5.21e-07!3;CL:0000057!6.80e-07!75 | |ontology_enrichment_celltype=CL:0000153!1.57e-10!9;CL:0000447!1.57e-10!9;CL:0000667!9.49e-09!6;CL:0000058!9.49e-09!6;CL:0000138!9.49e-09!6;CL:0000055!1.67e-08!180;CL:0002556!9.35e-08!6;CL:0000499!9.95e-08!27;CL:0000135!5.21e-07!3;CL:0000386!5.21e-07!3;CL:0000388!5.21e-07!3;CL:0000057!6.80e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000153;3.26e-28;9!CL:0000447;3.26e-28;9!CL:0000138;1.66e-22;6!CL:0000499;3.15e-17;28!CL:0000135;8.05e-17;3!CL:0000388;8.05e-17;3!CL:0000327;1.44e-16;15!CL:0002552;6.96e-10;5!CL:0002556;1.52e-08;6!CL:0000214;8.92e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,3.26e-28,9;CL:0000447,3.26e-28,9;CL:0000058,1.55e-22,6;CL:0000138,1.55e-22,6;CL:0000499,3.04e-17,28;CL:0000135,7.24e-17,3;CL:0000388,7.24e-17,3;CL:0000327,1.44e-16,15;CL:0002552,6.96e-10,5;CL:0002556,1.45e-08,6;CL:0000214,9.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;9.17e-11;2!UBERON:0003099;5.58e-07;1!UBERON:0003852;5.58e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.48e-08!57;UBERON:0005068!1.48e-08!57;UBERON:0006241!1.48e-08!57;UBERON:0007135!1.48e-08!57;UBERON:0000369!3.48e-08!4;UBERON:0002435!3.48e-08!4;UBERON:0000204!3.48e-08!4;UBERON:0010082!3.48e-08!4;UBERON:0001758!9.35e-08!6;UBERON:0003672!9.35e-08!6;UBERON:0000073!3.99e-07!94;UBERON:0001016!3.99e-07!94;UBERON:0005743!4.85e-07!86;UBERON:0001017!4.93e-07!82;UBERON:0000043!5.21e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!1.48e-08!57;UBERON:0005068!1.48e-08!57;UBERON:0006241!1.48e-08!57;UBERON:0007135!1.48e-08!57;UBERON:0000369!3.48e-08!4;UBERON:0002435!3.48e-08!4;UBERON:0000204!3.48e-08!4;UBERON:0010082!3.48e-08!4;UBERON:0001758!9.35e-08!6;UBERON:0003672!9.35e-08!6;UBERON:0000073!3.99e-07!94;UBERON:0001016!3.99e-07!94;UBERON:0005743!4.85e-07!86;UBERON:0001017!4.93e-07!82;UBERON:0000043!5.21e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000369;3.61e-20;4!UBERON:0002435;3.61e-20;4!UBERON:0000204;3.61e-20;4!UBERON:0007846;8.05e-17;3!UBERON:0000043;8.05e-17;3!UBERON:0007845;8.05e-17;3!UBERON:0005383;1.34e-15;3!UBERON:0005382;1.34e-15;3!UBERON:0009663;1.32e-11;7!UBERON:0001873;9.17e-11;2!UBERON:0002420;4.69e-09;9!UBERON:0000125;4.69e-09;9!UBERON:0007245;4.69e-09;9!UBERON:0002308;4.69e-09;9!UBERON:0010009;4.69e-09;9!UBERON:0010011;4.69e-09;9!UBERON:0000454;4.69e-09;9!UBERON:0001758;1.52e-08;6!UBERON:0003672;1.52e-08;6!UBERON:0011137;5.16e-08;11!UBERON:0010323;5.16e-08;11!UBERON:0006915;8.92e-08;3!UBERON:0007616;8.92e-08;3!UBERON:0002217;8.92e-08;3!UBERON:0002018;8.92e-08;3!UBERON:0003129;2.21e-07;7!UBERON:0001434;4.73e-07;36!UBERON:0005705;5.58e-07;1!UBERON:0008193;5.58e-07;1!UBERON:0010912;5.58e-07;1!UBERON:0002514;5.58e-07;1!UBERON:0003457;5.58e-07;1!UBERON:0008907;5.58e-07;1!UBERON:0008001;5.58e-07;1!UBERON:0007213;5.58e-07;1!UBERON:0009891;5.58e-07;1!UBERON:0007914;5.58e-07;1!UBERON:0007375;5.58e-07;1!UBERON:0003323;5.58e-07;1!UBERON:0010258;5.58e-07;1!UBERON:0005253;5.58e-07;1!UBERON:0007842;5.58e-07;1!UBERON:0002397;5.58e-07;1!UBERON:0003113;5.58e-07;1!UBERON:0003277;5.58e-07;1!UBERON:0001709;5.58e-07;1!UBERON:0002244;5.58e-07;1!UBERON:0005620;5.58e-07;1!UBERON:0010364;5.58e-07;1!UBERON:0004288;5.58e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,3.71e-20,4;UBERON:0002435,3.71e-20,4;UBERON:0000204,3.71e-20,4;UBERON:0010082,3.71e-20,4;UBERON:0007846,7.24e-17,3;UBERON:0000043,7.24e-17,3;UBERON:0007845,7.24e-17,3;UBERON:0005383,1.64e-15,3;UBERON:0005382,1.64e-15,3;UBERON:0009663,1.34e-11,7;UBERON:0001873,1.07e-10,2;UBERON:0010122,1.07e-10,2;UBERON:0002420,4.74e-09,9;UBERON:0000125,4.74e-09,9;UBERON:0007245,4.74e-09,9;UBERON:0002308,4.74e-09,9;UBERON:0010009,4.74e-09,9;UBERON:0010011,4.74e-09,9;UBERON:0000454,4.74e-09,9;UBERON:0001758,1.45e-08,6;UBERON:0003672,1.45e-08,6;UBERON:0000165,4.63e-08,29;UBERON:0000930,4.63e-08,29;UBERON:0010323,4.98e-08,11;UBERON:0006915,9.40e-08,3;UBERON:0007616,9.40e-08,3;UBERON:0002217,9.40e-08,3;UBERON:0002018,9.40e-08,3;UBERON:0003129,2.12e-07,7;UBERON:0005705,5.58e-07,1;UBERON:0008193,5.58e-07,1;UBERON:0010912,5.58e-07,1;UBERON:0002514,5.58e-07,1;UBERON:0003457,5.58e-07,1;UBERON:0008907,5.58e-07,1;UBERON:0008001,5.58e-07,1;UBERON:0007213,5.58e-07,1;UBERON:0009891,5.58e-07,1;UBERON:0007914,5.58e-07,1;UBERON:0009292,5.58e-07,1;UBERON:0003099,5.58e-07,1;UBERON:0007375,5.58e-07,1;UBERON:0003323,5.58e-07,1;UBERON:0010258,5.58e-07,1;UBERON:0007842,5.58e-07,1;UBERON:0009494,5.58e-07,1;UBERON:0010042,5.58e-07,1;UBERON:0010045,5.58e-07,1;UBERON:0010259,5.58e-07,1;UBERON:0010359,5.58e-07,1;UBERON:0009526,5.58e-07,1;UBERON:0002397,5.58e-07,1;UBERON:0003113,5.58e-07,1;UBERON:0003277,5.58e-07,1;UBERON:0001709,5.58e-07,1;UBERON:0004066,5.58e-07,1;UBERON:0002244,5.58e-07,1;UBERON:0005620,5.58e-07,1;UBERON:0004362,5.58e-07,1;UBERON:0010364,5.58e-07,1;UBERON:0010046,5.58e-07,1;UBERON:0005868,5.58e-07,1;UBERON:0007238,5.58e-07,1;UBERON:0004288,5.58e-07,1;UBERON:0004068,5.58e-07,1;UBERON:0010334,5.58e-07,1;UBERON:0003852,5.58e-07,1;UBERON:0010253,5.58e-07,1 | |||
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|short_description=p@chr8:57354052..57354105,+ | |short_description=p@chr8:57354052..57354105,+ | ||
}} | }} |
Latest revision as of 19:02, 31 July 2015
Short description: | p@chr8:57354052..57354105, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:57354052..57354105, + |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 3.26e-28 | 9 |
carbohydrate secreting cell | 3.26e-28 | 9 |
chondroblast | 1.55e-22 | 6 |
chondrocyte | 1.55e-22 | 6 |
stromal cell | 3.04e-17 | 28 |
fibrocyte | 7.24e-17 | 3 |
tendon cell | 7.24e-17 | 3 |
extracellular matrix secreting cell | 1.44e-16 | 15 |
fibroblast of gingiva | 6.96e-10 | 5 |
fibroblast of periodontium | 1.45e-08 | 6 |
synovial cell | 9.40e-08 | 3 |