FFCP PHASE1:Hg19::chr8:10512699..10512701,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94137 | |EntrezGene=94137 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15946 | |HGNC=15946 | ||
|TSSclassifier=strong | |||
|UniProt=A6NKC6 | |UniProt=A6NKC6 | ||
|association_with_transcript=-82bp_to_NM_178857,uc003wtc.2_5end | |association_with_transcript=-82bp_to_NM_178857,uc003wtc.2_5end | ||
|cluster_id=chr8:10512699..10512701,- | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_4_at_RP1L1_5end | |description=CAGE_peak_4_at_RP1L1_5end | ||
|id=chr8:10512699..10512701,- | |id=chr8:10512699..10512701,- | ||
|ontology_enrichment_celltype=CL:0000243!1.29e-07!15;CL:0000125!1.29e-07!15;CL:0000030!1.29e-07!15;CL:0000339!1.29e-07!15;CL:0000095!6.57e-07!17;CL:0000123!6.57e-07!17 | |ontology_enrichment_celltype=CL:0000243!1.29e-07!15;CL:0000125!1.29e-07!15;CL:0000030!1.29e-07!15;CL:0000339!1.29e-07!15;CL:0000095!6.57e-07!17;CL:0000123!6.57e-07!17 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.39e-53;3 | |||
|ontology_enrichment_disease=DOID:3093!2.13e-10!11;DOID:5409!2.61e-08!4 | |ontology_enrichment_disease=DOID:3093!2.13e-10!11;DOID:5409!2.61e-08!4 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!2.02e-57!2;UBERON:0002757!2.02e-57!2;UBERON:0010134!2.02e-57!2;UBERON:0002784!2.02e-57!2;UBERON:0005408!2.02e-57!2;UBERON:0001899!2.02e-57!2;UBERON:0003296!2.37e-29!4;UBERON:0010133!2.37e-29!4;UBERON:0000966!1.61e-23!5;UBERON:0005388!1.61e-23!5;UBERON:0001802!1.61e-23!5;UBERON:0001894!2.90e-17!7;UBERON:0006222!2.90e-17!7;UBERON:0000970!1.69e-13!20;UBERON:0002104!6.85e-13!21;UBERON:0000020!7.80e-12!23;UBERON:0001032!2.27e-11!24;UBERON:0004456!2.27e-11!24;UBERON:0005743!2.27e-08!86;UBERON:0003056!8.30e-08!61;UBERON:0000073!1.29e-07!94;UBERON:0001016!1.29e-07!94;UBERON:0000019!6.38e-07!19;UBERON:0000047!6.38e-07!19;UBERON:0004088!6.38e-07!19;UBERON:0003072!6.38e-07!19;UBERON:0003071!6.38e-07!19;UBERON:0004128!6.38e-07!19;UBERON:0000955!7.34e-07!69;UBERON:0006238!7.34e-07!69 | |ontology_enrichment_uberon=UBERON:0001905!2.02e-57!2;UBERON:0002757!2.02e-57!2;UBERON:0010134!2.02e-57!2;UBERON:0002784!2.02e-57!2;UBERON:0005408!2.02e-57!2;UBERON:0001899!2.02e-57!2;UBERON:0003296!2.37e-29!4;UBERON:0010133!2.37e-29!4;UBERON:0000966!1.61e-23!5;UBERON:0005388!1.61e-23!5;UBERON:0001802!1.61e-23!5;UBERON:0001894!2.90e-17!7;UBERON:0006222!2.90e-17!7;UBERON:0000970!1.69e-13!20;UBERON:0002104!6.85e-13!21;UBERON:0000020!7.80e-12!23;UBERON:0001032!2.27e-11!24;UBERON:0004456!2.27e-11!24;UBERON:0005743!2.27e-08!86;UBERON:0003056!8.30e-08!61;UBERON:0000073!1.29e-07!94;UBERON:0001016!1.29e-07!94;UBERON:0000019!6.38e-07!19;UBERON:0000047!6.38e-07!19;UBERON:0004088!6.38e-07!19;UBERON:0003072!6.38e-07!19;UBERON:0003071!6.38e-07!19;UBERON:0004128!6.38e-07!19;UBERON:0000955!7.34e-07!69;UBERON:0006238!7.34e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.34e-79;2!UBERON:0002757;2.34e-79;2!UBERON:0010134;2.34e-79;2!UBERON:0005408;2.34e-79;2!UBERON:0001899;2.34e-79;2!UBERON:0003296;2.22e-40;4!UBERON:0010133;2.22e-40;4!UBERON:0002784;2.22e-40;4!UBERON:0000966;2.74e-32;5!UBERON:0005388;2.74e-32;5!UBERON:0001802;2.74e-32;5!UBERON:0001894;1.28e-23;7!UBERON:0000970;1.42e-18;20!UBERON:0002104;9.85e-18;21!UBERON:0000020;2.85e-16;23!UBERON:0001032;1.25e-15;24!UBERON:0004456;1.25e-15;24!UBERON:0000019;2.56e-09;19!UBERON:0000047;2.56e-09;19!UBERON:0004088;2.56e-09;19!UBERON:0010230;2.56e-09;19!UBERON:0001456;1.59e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.34e-79,2;UBERON:0002757,2.34e-79,2;UBERON:0010134,2.34e-79,2;UBERON:0005408,2.34e-79,2;UBERON:0001899,2.34e-79,2;UBERON:0003296,2.22e-40,4;UBERON:0010133,2.22e-40,4;UBERON:0002784,2.22e-40,4;UBERON:0000966,4.06e-27,6;UBERON:0005388,4.06e-27,6;UBERON:0001802,4.06e-27,6;UBERON:0001894,1.28e-23,7;UBERON:0006222,1.28e-23,7;UBERON:0000970,9.85e-18,21;UBERON:0002104,9.85e-18,21;UBERON:0000020,1.25e-15,24;UBERON:0001032,1.25e-15,24;UBERON:0004456,1.25e-15,24;UBERON:0003056,7.02e-11,61;UBERON:0000019,6.69e-09,20;UBERON:0000047,6.69e-09,20;UBERON:0010312,6.69e-09,20;UBERON:0004088,6.69e-09,20;UBERON:0010230,6.69e-09,20;UBERON:0003072,6.69e-09,20;UBERON:0004128,6.69e-09,20;UBERON:0003071,6.69e-09,20;UBERON:0003075,2.75e-08,82;UBERON:0007284,2.75e-08,82;UBERON:0001456,3.51e-08,22;UBERON:0002346,6.20e-08,86 | |||
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|short_description=p4@RP1L1 | |short_description=p4@RP1L1 | ||
}} | }} |
Latest revision as of 01:13, 25 September 2015
Short description: | p4@RP1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RP1L1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -82bp_to_NM_178857, uc003wtc.2_5end |
EntrezGene: | RP1L1 |
HGNC: | 15946 |
UniProt: | A6NKC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.34e-79 | 2 |
regional part of epithalamus | 2.34e-79 | 2 |
secretory circumventricular organ | 2.34e-79 | 2 |
circumventricular organ | 2.34e-79 | 2 |
epithalamus | 2.34e-79 | 2 |
gland of diencephalon | 2.22e-40 | 4 |
neuroendocrine gland | 2.22e-40 | 4 |
regional part of diencephalon | 2.22e-40 | 4 |
retina | 4.06e-27 | 6 |
photoreceptor array | 4.06e-27 | 6 |
posterior segment of eyeball | 4.06e-27 | 6 |
diencephalon | 1.28e-23 | 7 |
future diencephalon | 1.28e-23 | 7 |
eye | 9.85e-18 | 21 |
visual system | 9.85e-18 | 21 |
sense organ | 1.25e-15 | 24 |
sensory system | 1.25e-15 | 24 |
entire sense organ system | 1.25e-15 | 24 |
pre-chordal neural plate | 7.02e-11 | 61 |
camera-type eye | 6.69e-09 | 20 |
simple eye | 6.69e-09 | 20 |
immature eye | 6.69e-09 | 20 |
ocular region | 6.69e-09 | 20 |
eyeball of camera-type eye | 6.69e-09 | 20 |
optic cup | 6.69e-09 | 20 |
optic vesicle | 6.69e-09 | 20 |
eye primordium | 6.69e-09 | 20 |
neural plate | 2.75e-08 | 82 |
presumptive neural plate | 2.75e-08 | 82 |
face | 3.51e-08 | 22 |
neurectoderm | 6.20e-08 | 86 |