FFCP PHASE1:Hg19::chr7:38357145..38357165,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=445347 | |EntrezGene=445347 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-208bp_to_uc003tgg.1,uc003tgh.1,uc003tgi.1,uc003tgj.1_5end | |association_with_transcript=-208bp_to_uc003tgg.1,uc003tgh.1,uc003tgi.1,uc003tgj.1_5end | ||
|cluster_id=chr7:38357145..38357165,- | |||
|coexpression_cluster_id=C1996 | |coexpression_cluster_id=C1996 | ||
|description=CAGE_peak_6_at_TARP_5end | |description=CAGE_peak_6_at_TARP_5end | ||
|id=chr7:38357145..38357165,- | |id=chr7:38357145..38357165,- | ||
|ontology_enrichment_celltype=CL:0000625!3.75e-23!11;CL:0000791!1.04e-18!18;CL:0000789!1.04e-18!18;CL:0002420!1.04e-18!18;CL:0002419!1.04e-18!18;CL:0000790!1.04e-18!18;CL:0000037!9.33e-16!172;CL:0000566!9.33e-16!172;CL:0000084!1.60e-14!25;CL:0000827!1.60e-14!25;CL:0000988!3.63e-14!182;CL:0002032!3.39e-13!165;CL:0000837!3.39e-13!165;CL:0000738!4.34e-12!140;CL:0002087!2.89e-10!119;CL:0000838!3.30e-08!52;CL:0000542!5.72e-08!53;CL:0000051!5.72e-08!53;CL:0000623!7.36e-08!3;CL:0000825!7.36e-08!3;CL:0002031!8.48e-08!124;CL:0000767!1.38e-07!3;CL:0000842!1.57e-07!3 | |ontology_enrichment_celltype=CL:0000625!3.75e-23!11;CL:0000791!1.04e-18!18;CL:0000789!1.04e-18!18;CL:0002420!1.04e-18!18;CL:0002419!1.04e-18!18;CL:0000790!1.04e-18!18;CL:0000037!9.33e-16!172;CL:0000566!9.33e-16!172;CL:0000084!1.60e-14!25;CL:0000827!1.60e-14!25;CL:0000988!3.63e-14!182;CL:0002032!3.39e-13!165;CL:0000837!3.39e-13!165;CL:0000738!4.34e-12!140;CL:0002087!2.89e-10!119;CL:0000838!3.30e-08!52;CL:0000542!5.72e-08!53;CL:0000051!5.72e-08!53;CL:0000623!7.36e-08!3;CL:0000825!7.36e-08!3;CL:0002031!8.48e-08!124;CL:0000767!1.38e-07!3;CL:0000842!1.57e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000625;2.04e-45;11!CL:0000791;1.51e-39;18!CL:0000789;1.51e-39;18!CL:0002419;1.51e-39;18!CL:0000084;1.47e-32;25!CL:0000623;7.04e-17;3!CL:0000767;3.89e-16;3!CL:0000542;5.05e-12;53!CL:0000226;2.01e-08;3!CL:0000842;2.01e-08;3!CL:0002127;5.58e-07;1!CL:0000911;5.58e-07;1!CL:0000814;5.58e-07;1!CL:0000895;8.90e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.40e-45,11;CL:0000791,1.17e-39,18;CL:0000789,1.17e-39,18;CL:0002420,1.17e-39,18;CL:0002419,1.17e-39,18;CL:0000790,1.17e-39,18;CL:0000084,1.43e-32,25;CL:0000827,1.43e-32,25;CL:0000838,2.69e-22,52;CL:0000542,8.27e-22,53;CL:0000051,8.27e-22,53;CL:0000623,6.87e-17,3;CL:0000825,6.87e-17,3;CL:0000767,3.16e-16,3;CL:0000037,2.87e-15,168;CL:0000738,3.83e-15,136;CL:0000988,3.29e-14,177;CL:0002087,1.21e-13,115;CL:0002032,3.31e-13,161;CL:0000837,3.31e-13,161;CL:0000893,4.39e-12,2;CL:0002489,4.39e-12,2;CL:0000809,4.39e-12,2;CL:0000808,4.39e-12,2;CL:0000894,4.39e-12,2;CL:0000806,4.39e-12,2;CL:0000807,4.39e-12,2;CL:0000805,4.39e-12,2;CL:0002425,4.39e-12,2;CL:0002031,5.40e-10,120;CL:0000226,2.01e-08,3;CL:0000842,2.01e-08,3;CL:0002127,5.58e-07,1;CL:0000914,5.58e-07,1;CL:0000911,5.58e-07,1;CL:0000814,5.58e-07,1;CL:0002042,5.58e-07,1;CL:0002039,5.58e-07,1;CL:0002040,5.58e-07,1;CL:0002041,5.58e-07,1;CL:0000810,9.15e-07,1;CL:0000895,9.15e-07,1;CL:0002436,9.15e-07,1;CL:0002427,9.15e-07,1;CL:0002428,9.15e-07,1;CL:0002429,9.15e-07,1;CL:0002433,9.15e-07,1;CL:0002431,9.15e-07,1;CL:0002432,9.15e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;1.51e-39;18!CL:0002425;4.27e-12;2!CL:0000051;5.05e-12;53!CL:0002427;8.90e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.31e-16!15;UBERON:0000179!2.31e-16!15;UBERON:0000463!2.31e-16!15;UBERON:0002390!5.14e-13!102;UBERON:0003061!5.14e-13!102;UBERON:0002193!5.39e-12!112;UBERON:0004177!4.49e-11!7;UBERON:0002370!1.73e-09!4;UBERON:0005058!1.73e-09!4;UBERON:0009113!1.73e-09!4;UBERON:0003295!1.73e-09!4;UBERON:0005562!1.73e-09!4;UBERON:0007023!3.29e-09!115;UBERON:0000974!4.77e-07!10 | |ontology_enrichment_uberon=UBERON:0000178!2.31e-16!15;UBERON:0000179!2.31e-16!15;UBERON:0000463!2.31e-16!15;UBERON:0002390!5.14e-13!102;UBERON:0003061!5.14e-13!102;UBERON:0002193!5.39e-12!112;UBERON:0004177!4.49e-11!7;UBERON:0002370!1.73e-09!4;UBERON:0005058!1.73e-09!4;UBERON:0009113!1.73e-09!4;UBERON:0003295!1.73e-09!4;UBERON:0005562!1.73e-09!4;UBERON:0007023!3.29e-09!115;UBERON:0000974!4.77e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.17e-33;15!UBERON:0000179;2.17e-33;15!UBERON:0000463;2.17e-33;15!UBERON:0002390;1.64e-22;32!UBERON:0002193;7.58e-12;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.90e-33,15;UBERON:0000179,1.90e-33,15;UBERON:0000463,1.90e-33,15;UBERON:0002370,1.60e-12,4;UBERON:0005058,1.60e-12,4;UBERON:0009113,1.60e-12,4;UBERON:0003295,1.60e-12,4;UBERON:0005562,1.60e-12,4;UBERON:0004177,4.91e-12,7;UBERON:0005057,4.91e-12,7;UBERON:0002390,2.01e-11,98;UBERON:0003061,2.01e-11,98;UBERON:0002193,4.84e-10,108;UBERON:0003351,1.69e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,4.22212337906934,1.85779347979291,0,0,0,0,0,0.293600439334847,0.553995408531877,1.80490002723128,0.651032612147555,0.223915474239924,3.2389366601898,0.515151135268373,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0,0,0,0.918251677112708,0.641858054152187,0,0,0.598390972864896,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0.113309342697566,6.13152789763074,0,0.759059076058509,1.27426165729639,3.90650072313851,1.90090408889675,5.72185452495537,8.57510294734603,3.74792179657038,3.31488152861624,2.46338399076314,8.46748321543876,0.534880391567015,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.234813287178,7.48716888767323,7.54696512008311,3.46526197955321,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.09779314940704,0.431428401637234,9.07184241329277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.02979043692868,4.58782324285425,2.27858874869665,6.4322579373603,5.75907182320672,1.94541993357815,1.08006287447623,0,0,0,0,0,0,0,0,4.39074617152197,0,0.635020748171649,0,0.561594356226918,0,0.313359791546046,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04628948090749,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,1.02193298195737,0.627921025580099,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.533937062838473,0.471612915298998,1.24271716604159,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0.845855261818682,1.03132620757723,0,0,0,0,0,0,0.143339583151451,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0.23806443146374,1.0334225573761,0.806971285846153,0,0.0636471582781649,0,0,0,0.606168477131288,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,4.22212337906934,1.85779347979291,0,0,0,0,0,0.293600439334847,0.553995408531877,1.80490002723128,0.651032612147555,0.223915474239924,3.2389366601898,0.515151135268373,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0,0,0,0.918251677112708,0.641858054152187,0,0,0.598390972864896,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0.113309342697566,6.13152789763074,0,0.759059076058509,1.27426165729639,3.90650072313851,1.90090408889675,5.72185452495537,8.57510294734603,3.74792179657038,3.31488152861624,2.46338399076314,8.46748321543876,0.534880391567015,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.234813287178,7.48716888767323,7.54696512008311,3.46526197955321,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.09779314940704,0.431428401637234,9.07184241329277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.02979043692868,4.58782324285425,2.27858874869665,6.4322579373603,5.75907182320672,1.94541993357815,1.08006287447623,0,0,0,0,0,0,0,0,4.39074617152197,0,0.635020748171649,0,0.561594356226918,0,0.313359791546046,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04628948090749,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,1.02193298195737,0.627921025580099,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.533937062838473,0.471612915298998,1.24271716604159,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0.845855261818682,1.03132620757723,0,0,0,0,0,0,0.143339583151451,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0.23806443146374,1.0334225573761,0.806971285846153,0,0.0636471582781649,0,0,0,0.606168477131288,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p6@TARP | |short_description=p6@TARP | ||
}} | }} |
Latest revision as of 12:31, 18 September 2015
Short description: | p6@TARP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TARP_5end |
Coexpression cluster: | C1996_Natural_CD8_NK_CD4_Peripheral_blood_Whole |
Association with transcript: | -208bp_to_uc003tgg.1, uc003tgh.1, uc003tgi.1, uc003tgj.1_5end |
EntrezGene: | TARP |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.90e-33 | 15 |
haemolymphatic fluid | 1.90e-33 | 15 |
organism substance | 1.90e-33 | 15 |
thymus | 1.60e-12 | 4 |
hemolymphoid system gland | 1.60e-12 | 4 |
thymic region | 1.60e-12 | 4 |
pharyngeal gland | 1.60e-12 | 4 |
thymus primordium | 1.60e-12 | 4 |
hemopoietic organ | 4.91e-12 | 7 |
immune organ | 4.91e-12 | 7 |
hematopoietic system | 2.01e-11 | 98 |
blood island | 2.01e-11 | 98 |
hemolymphoid system | 4.84e-10 | 108 |
pharyngeal epithelium | 1.69e-08 | 6 |