FFCP PHASE1:Hg19::chr7:134464377..134464413,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=800 | |EntrezGene=800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1441 | |HGNC=1441 | ||
|TSSclassifier=strong | |||
|UniProt=Q05682,F8WE61 | |UniProt=Q05682,F8WE61 | ||
|association_with_transcript=0bp_to_ENST00000361675,ENST00000430085,ENST00000462181,ENST00000475772,ENST00000482470_5end | |association_with_transcript=0bp_to_ENST00000361675,ENST00000430085,ENST00000462181,ENST00000475772,ENST00000482470_5end | ||
|cluster_id=chr7:134464377..134464413,+ | |||
|coexpression_cluster_id=C1986 | |coexpression_cluster_id=C1986 | ||
|description=CAGE_peak_1_at_CALD1_5end | |description=CAGE_peak_1_at_CALD1_5end | ||
|id=chr7:134464377..134464413,+ | |id=chr7:134464377..134464413,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.11e-33!180;CL:0000057!8.65e-17!75;CL:0000222!1.71e-14!119;CL:0000220!8.52e-14!246;CL:0002321!1.29e-13!248;CL:0000680!1.08e-12!57;CL:0000056!1.08e-12!57;CL:0000355!1.08e-12!57;CL:0000187!1.85e-12!54;CL:0000393!3.14e-12!60;CL:0000211!3.14e-12!60;CL:0000183!3.47e-11!59;CL:0000192!6.62e-11!42;CL:0000514!6.62e-11!42;CL:0000359!5.56e-10!32;CL:0002620!6.81e-08!23;CL:0002334!5.43e-07!12 | |ontology_enrichment_celltype=CL:0000055!8.11e-33!180;CL:0000057!8.65e-17!75;CL:0000222!1.71e-14!119;CL:0000220!8.52e-14!246;CL:0002321!1.29e-13!248;CL:0000680!1.08e-12!57;CL:0000056!1.08e-12!57;CL:0000355!1.08e-12!57;CL:0000187!1.85e-12!54;CL:0000393!3.14e-12!60;CL:0000211!3.14e-12!60;CL:0000183!3.47e-11!59;CL:0000192!6.62e-11!42;CL:0000514!6.62e-11!42;CL:0000359!5.56e-10!32;CL:0002620!6.81e-08!23;CL:0002334!5.43e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.77e-09;32!CL:0000192;5.55e-08;43!CL:0002620;6.14e-08;23!CL:0000187;2.80e-07;55!CL:0000057;4.98e-07;73!CL:0002334;5.02e-07;12!CL:0000134;8.83e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.41e-17,76;CL:0000222,2.96e-14,121;CL:0002321,2.51e-13,250;CL:0000680,8.18e-13,58;CL:0000056,8.18e-13,58;CL:0000355,8.18e-13,58;CL:0000187,1.42e-12,55;CL:0000393,2.36e-12,61;CL:0000211,2.36e-12,61;CL:0000192,5.33e-11,43;CL:0000514,5.33e-11,43;CL:0000359,4.95e-10,32;CL:0002620,6.24e-08,23;CL:0002334,5.05e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;5.55e-08;43!CL:0000355;5.99e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.93e-17!659;UBERON:0004872!6.56e-16!84;UBERON:0002049!1.11e-15!79;UBERON:0007798!1.11e-15!79;UBERON:0000914!1.59e-15!83;UBERON:0002329!1.59e-15!83;UBERON:0003077!1.59e-15!83;UBERON:0003059!1.59e-15!83;UBERON:0007282!1.59e-15!83;UBERON:0009618!1.59e-15!83;UBERON:0007285!1.59e-15!83;UBERON:0000475!2.14e-14!365;UBERON:0000467!1.58e-13!625;UBERON:0002385!2.59e-13!63;UBERON:0001015!2.59e-13!63;UBERON:0000383!2.59e-13!63;UBERON:0005256!2.65e-13!143;UBERON:0000486!2.70e-13!82;UBERON:0000480!3.19e-13!626;UBERON:0004535!5.84e-13!110;UBERON:0004290!6.83e-13!70;UBERON:0000055!9.55e-13!69;UBERON:0001009!1.09e-12!113;UBERON:0001981!1.34e-12!60;UBERON:0007500!1.34e-12!60;UBERON:0004537!1.34e-12!60;UBERON:0006965!1.34e-12!60;UBERON:0001134!1.50e-12!61;UBERON:0002036!1.50e-12!61;UBERON:0003082!1.50e-12!61;UBERON:0000481!3.96e-11!347;UBERON:0001637!9.26e-11!42;UBERON:0003509!9.26e-11!42;UBERON:0004572!9.26e-11!42;UBERON:0000490!1.16e-10!138;UBERON:0003914!2.07e-10!118;UBERON:0000119!2.17e-10!312;UBERON:0002100!2.62e-10!216;UBERON:0000483!4.42e-10!309;UBERON:0000477!6.70e-10!286;UBERON:0003102!1.00e-09!95;UBERON:0004573!2.52e-09!33;UBERON:0004571!2.52e-09!33;UBERON:0003104!5.14e-08!238;UBERON:0009142!5.14e-08!238;UBERON:0000922!5.28e-08!612;UBERON:0002050!6.51e-08!605;UBERON:0005423!6.51e-08!605;UBERON:0002199!8.97e-08!45;UBERON:0002416!8.97e-08!45;UBERON:0000923!1.01e-07!604;UBERON:0005291!1.01e-07!604;UBERON:0006598!1.01e-07!604;UBERON:0002532!1.01e-07!604;UBERON:0004111!2.59e-07!241;UBERON:0002097!3.87e-07!40;UBERON:0000947!5.47e-07!21;UBERON:0010191!5.47e-07!21 | |ontology_enrichment_uberon=UBERON:0000468!3.93e-17!659;UBERON:0004872!6.56e-16!84;UBERON:0002049!1.11e-15!79;UBERON:0007798!1.11e-15!79;UBERON:0000914!1.59e-15!83;UBERON:0002329!1.59e-15!83;UBERON:0003077!1.59e-15!83;UBERON:0003059!1.59e-15!83;UBERON:0007282!1.59e-15!83;UBERON:0009618!1.59e-15!83;UBERON:0007285!1.59e-15!83;UBERON:0000475!2.14e-14!365;UBERON:0000467!1.58e-13!625;UBERON:0002385!2.59e-13!63;UBERON:0001015!2.59e-13!63;UBERON:0000383!2.59e-13!63;UBERON:0005256!2.65e-13!143;UBERON:0000486!2.70e-13!82;UBERON:0000480!3.19e-13!626;UBERON:0004535!5.84e-13!110;UBERON:0004290!6.83e-13!70;UBERON:0000055!9.55e-13!69;UBERON:0001009!1.09e-12!113;UBERON:0001981!1.34e-12!60;UBERON:0007500!1.34e-12!60;UBERON:0004537!1.34e-12!60;UBERON:0006965!1.34e-12!60;UBERON:0001134!1.50e-12!61;UBERON:0002036!1.50e-12!61;UBERON:0003082!1.50e-12!61;UBERON:0000481!3.96e-11!347;UBERON:0001637!9.26e-11!42;UBERON:0003509!9.26e-11!42;UBERON:0004572!9.26e-11!42;UBERON:0000490!1.16e-10!138;UBERON:0003914!2.07e-10!118;UBERON:0000119!2.17e-10!312;UBERON:0002100!2.62e-10!216;UBERON:0000483!4.42e-10!309;UBERON:0000477!6.70e-10!286;UBERON:0003102!1.00e-09!95;UBERON:0004573!2.52e-09!33;UBERON:0004571!2.52e-09!33;UBERON:0003104!5.14e-08!238;UBERON:0009142!5.14e-08!238;UBERON:0000922!5.28e-08!612;UBERON:0002050!6.51e-08!605;UBERON:0005423!6.51e-08!605;UBERON:0002199!8.97e-08!45;UBERON:0002416!8.97e-08!45;UBERON:0000923!1.01e-07!604;UBERON:0005291!1.01e-07!604;UBERON:0006598!1.01e-07!604;UBERON:0002532!1.01e-07!604;UBERON:0004111!2.59e-07!241;UBERON:0002097!3.87e-07!40;UBERON:0000947!5.47e-07!21;UBERON:0010191!5.47e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.32e-08;33!UBERON:0004571;1.32e-08;33!UBERON:0001637;4.34e-08;42!UBERON:0003509;4.34e-08;42!UBERON:0004572;4.34e-08;42!UBERON:0002385;2.72e-07;31!UBERON:0001015;2.72e-07;31!UBERON:0000383;2.72e-07;31!UBERON:0000947;5.03e-07;21!UBERON:0010191;5.03e-07;21 | |||
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| ||
|short_description=p1@CALD1 | |short_description=p1@CALD1 | ||
}} | }} |
Latest revision as of 11:39, 16 September 2015
Short description: | p1@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CALD1_5end |
Coexpression cluster: | C1986_Preadipocyte_Mesenchymal_basal_Fibroblast_Ewing_hepatic_Adipocyte |
Association with transcript: | 0bp_to_ENST00000361675, ENST00000430085, ENST00000462181, ENST00000475772, ENST00000482470_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | Q05682F8WE61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.41e-17 | 76 |
mesodermal cell | 2.96e-14 | 121 |
embryonic cell | 2.51e-13 | 250 |
muscle precursor cell | 8.18e-13 | 58 |
myoblast | 8.18e-13 | 58 |
multi-potent skeletal muscle stem cell | 8.18e-13 | 58 |
muscle cell | 1.42e-12 | 55 |
electrically responsive cell | 2.36e-12 | 61 |
electrically active cell | 2.36e-12 | 61 |
smooth muscle cell | 5.33e-11 | 43 |
smooth muscle myoblast | 5.33e-11 | 43 |
vascular associated smooth muscle cell | 4.95e-10 | 32 |
skin fibroblast | 6.24e-08 | 23 |
preadipocyte | 5.05e-07 | 12 |