FFCP PHASE1:Hg19::chr7:110731476..110731516,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54674 | |EntrezGene=54674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17200 | |HGNC=17200 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=326bp_to_ENST00000464835_5end | |association_with_transcript=326bp_to_ENST00000464835_5end | ||
|cluster_id=chr7:110731476..110731516,+ | |||
|coexpression_cluster_id=C1605 | |coexpression_cluster_id=C1605 | ||
|description=CAGE_peak_3_at_LRRN3_5end | |description=CAGE_peak_3_at_LRRN3_5end | ||
|id=chr7:110731476..110731516,+ | |id=chr7:110731476..110731516,+ | ||
|ontology_enrichment_celltype=CL:0000625!1.07e-07!11 | |ontology_enrichment_celltype=CL:0000625!1.07e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000625;8.69e-13;11!CL:0000791;1.45e-07;18!CL:0000789;1.45e-07;18!CL:0002419;1.45e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.69e-13,11;CL:0000791,1.01e-07,18;CL:0000789,1.01e-07,18;CL:0002420,1.01e-07,18;CL:0002419,1.01e-07,18;CL:0000790,1.01e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.30e-12;3!UBERON:0010122;9.31e-09;2!CL:0000790;1.45e-07;18!UBERON:0006601;2.28e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@LRRN3 | |short_description=p3@LRRN3 | ||
}} | }} |
Latest revision as of 03:45, 25 September 2015
Short description: | p3@LRRN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRN3_5end |
Coexpression cluster: | C1605_CD4_temporal_occipital_duodenum_Neural_mycosis_medial |
Association with transcript: | 326bp_to_ENST00000464835_5end |
EntrezGene: | LRRN3 |
HGNC: | 17200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.69e-13 | 11 |
mature alpha-beta T cell | 1.01e-07 | 18 |
alpha-beta T cell | 1.01e-07 | 18 |
immature T cell | 1.01e-07 | 18 |
mature T cell | 1.01e-07 | 18 |
immature alpha-beta T cell | 1.01e-07 | 18 |