FFCP PHASE1:Hg19::chr7:103630045..103630056,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5649 | |EntrezGene=5649 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9957 | |HGNC=9957 | ||
|TSSclassifier=strong | |||
|UniProt=P78509,F8WF74 | |UniProt=P78509,F8WF74 | ||
|association_with_transcript=-82bp_to_ENST00000343529,ENST00000424685,ENST00000424828,ENST00000428762,ENST00000448171,NM_005045,NM_173054,uc003vca.2,uc010liz.2_5end | |association_with_transcript=-82bp_to_ENST00000343529,ENST00000424685,ENST00000424828,ENST00000428762,ENST00000448171,NM_005045,NM_173054,uc003vca.2,uc010liz.2_5end | ||
|cluster_id=chr7:103630045..103630056,- | |||
|coexpression_cluster_id=C2873 | |coexpression_cluster_id=C2873 | ||
|description=CAGE_peak_3_at_RELN_5end | |description=CAGE_peak_3_at_RELN_5end | ||
|id=chr7:103630045..103630056,- | |id=chr7:103630045..103630056,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000064;3.98e-11;3!CL:0000067;3.98e-11;3!CL:0005012;3.98e-11;3!CL:0002304;3.98e-11;3!CL:0002138;4.68e-10;6!CL:0000123;3.03e-08;2!CL:0000242;3.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,8.28e-11,3;CL:0000067,8.28e-11,3;CL:0005012,8.28e-11,3;CL:0002304,8.28e-11,3;CL:0005020,4.23e-10,6;CL:0002138,4.23e-10,6;CL:0005022,4.23e-10,6;CL:0000242,2.99e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.37e-12;3!CL:0005022;4.68e-10;6!UBERON:0004161;4.93e-08;11!UBERON:0009497;9.66e-07;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.47e-28!86;UBERON:0007284!1.47e-28!86;UBERON:0002346!1.82e-26!90;UBERON:0001049!1.59e-25!57;UBERON:0005068!1.59e-25!57;UBERON:0006241!1.59e-25!57;UBERON:0007135!1.59e-25!57;UBERON:0007023!1.62e-25!115;UBERON:0005743!1.01e-23!86;UBERON:0002616!2.80e-22!59;UBERON:0000073!3.36e-22!94;UBERON:0001016!3.36e-22!94;UBERON:0003056!1.85e-21!61;UBERON:0001017!7.46e-21!82;UBERON:0000955!1.34e-20!69;UBERON:0006238!1.34e-20!69;UBERON:0002780!1.36e-17!41;UBERON:0001890!1.36e-17!41;UBERON:0006240!1.36e-17!41;UBERON:0003080!5.93e-17!42;UBERON:0000033!2.63e-16!123;UBERON:0000153!1.30e-15!129;UBERON:0007811!1.30e-15!129;UBERON:0004121!3.87e-15!169;UBERON:0001893!8.16e-15!34;UBERON:0002020!9.39e-15!34;UBERON:0003528!9.39e-15!34;UBERON:0000477!1.18e-14!286;UBERON:0000924!2.46e-14!173;UBERON:0006601!2.46e-14!173;UBERON:0002791!4.55e-14!33;UBERON:0001869!1.51e-13!32;UBERON:0004111!1.55e-12!241;UBERON:0001950!2.32e-12!20;UBERON:0002619!2.34e-12!22;UBERON:0000025!8.36e-12!194;UBERON:0000483!5.80e-11!309;UBERON:0000119!1.28e-10!312;UBERON:0000956!2.60e-10!25;UBERON:0000203!2.60e-10!25;UBERON:0003076!5.50e-10!15;UBERON:0003057!5.50e-10!15;UBERON:0000475!8.04e-09!365;UBERON:0007625!9.06e-08!11;UBERON:0004733!3.22e-07!12;UBERON:0002028!3.22e-07!12;UBERON:0007277!3.22e-07!12;UBERON:0000064!7.56e-07!219 | |ontology_enrichment_uberon=UBERON:0003075!1.47e-28!86;UBERON:0007284!1.47e-28!86;UBERON:0002346!1.82e-26!90;UBERON:0001049!1.59e-25!57;UBERON:0005068!1.59e-25!57;UBERON:0006241!1.59e-25!57;UBERON:0007135!1.59e-25!57;UBERON:0007023!1.62e-25!115;UBERON:0005743!1.01e-23!86;UBERON:0002616!2.80e-22!59;UBERON:0000073!3.36e-22!94;UBERON:0001016!3.36e-22!94;UBERON:0003056!1.85e-21!61;UBERON:0001017!7.46e-21!82;UBERON:0000955!1.34e-20!69;UBERON:0006238!1.34e-20!69;UBERON:0002780!1.36e-17!41;UBERON:0001890!1.36e-17!41;UBERON:0006240!1.36e-17!41;UBERON:0003080!5.93e-17!42;UBERON:0000033!2.63e-16!123;UBERON:0000153!1.30e-15!129;UBERON:0007811!1.30e-15!129;UBERON:0004121!3.87e-15!169;UBERON:0001893!8.16e-15!34;UBERON:0002020!9.39e-15!34;UBERON:0003528!9.39e-15!34;UBERON:0000477!1.18e-14!286;UBERON:0000924!2.46e-14!173;UBERON:0006601!2.46e-14!173;UBERON:0002791!4.55e-14!33;UBERON:0001869!1.51e-13!32;UBERON:0004111!1.55e-12!241;UBERON:0001950!2.32e-12!20;UBERON:0002619!2.34e-12!22;UBERON:0000025!8.36e-12!194;UBERON:0000483!5.80e-11!309;UBERON:0000119!1.28e-10!312;UBERON:0000956!2.60e-10!25;UBERON:0000203!2.60e-10!25;UBERON:0003076!5.50e-10!15;UBERON:0003057!5.50e-10!15;UBERON:0000475!8.04e-09!365;UBERON:0007625!9.06e-08!11;UBERON:0004733!3.22e-07!12;UBERON:0002028!3.22e-07!12;UBERON:0007277!3.22e-07!12;UBERON:0000064!7.56e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0000488;4.19e-14;4!UBERON:0001778;3.98e-11;3!UBERON:0001775;3.98e-11;3!UBERON:0000970;9.70e-10;20!UBERON:0002203;1.99e-09;6!UBERON:0001768;1.99e-09;6!UBERON:0002200;1.99e-09;6!UBERON:0002104;3.25e-09;21!UBERON:0002465;7.50e-09;10!UBERON:0000369;1.36e-08;4!UBERON:0002435;1.36e-08;4!UBERON:0000204;1.36e-08;4!UBERON:0000020;2.66e-08;23!UBERON:0009663;3.43e-08;7!UBERON:0000019;5.54e-08;19!UBERON:0000047;5.54e-08;19!UBERON:0004088;5.54e-08;19!UBERON:0010230;5.54e-08;19!UBERON:0001032;6.67e-08;24!UBERON:0004456;6.67e-08;24!UBERON:0007625;9.55e-08;11!UBERON:0001473;1.54e-07;8!UBERON:0004536;1.54e-07;8!UBERON:0006558;1.54e-07;8!UBERON:0001456;3.94e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,5.55e-15,82;UBERON:0007284,5.55e-15,82;UBERON:0002346,4.82e-14,86;UBERON:0000488,1.42e-13,4;UBERON:0010371,2.75e-13,104;UBERON:0001778,8.28e-11,3;UBERON:0001775,8.28e-11,3;UBERON:0003056,1.69e-10,61;UBERON:0001049,3.49e-09,56;UBERON:0005068,3.49e-09,56;UBERON:0006241,3.49e-09,56;UBERON:0007135,3.49e-09,56;UBERON:0002203,4.40e-09,6;UBERON:0001768,4.40e-09,6;UBERON:0002200,4.40e-09,6;UBERON:0000970,4.43e-09,21;UBERON:0002104,4.43e-09,21;UBERON:0002465,6.69e-09,10;UBERON:0000369,1.54e-08,4;UBERON:0002435,1.54e-08,4;UBERON:0000204,1.54e-08,4;UBERON:0010082,1.54e-08,4;UBERON:0000073,2.01e-08,53;UBERON:0002616,2.01e-08,53;UBERON:0001017,2.52e-08,81;UBERON:0010314,2.74e-08,132;UBERON:0001016,4.00e-08,89;UBERON:0009663,4.17e-08,7;UBERON:0000955,4.53e-08,68;UBERON:0006238,4.53e-08,68;UBERON:0004121,5.34e-08,171;UBERON:0000924,5.34e-08,171;UBERON:0006601,5.34e-08,171;UBERON:0000020,8.69e-08,24;UBERON:0001032,8.69e-08,24;UBERON:0004456,8.69e-08,24;UBERON:0001473,1.43e-07,8;UBERON:0004536,1.43e-07,8;UBERON:0006558,1.43e-07,8;UBERON:0007625,1.65e-07,11;UBERON:0000019,1.83e-07,20;UBERON:0000047,1.83e-07,20;UBERON:0010312,1.83e-07,20;UBERON:0004088,1.83e-07,20;UBERON:0010230,1.83e-07,20;UBERON:0003072,1.83e-07,20;UBERON:0004128,1.83e-07,20;UBERON:0003071,1.83e-07,20 | |||
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|short_description=p3@RELN | |short_description=p3@RELN | ||
}} | }} |
Latest revision as of 20:02, 24 September 2015
Short description: | p3@RELN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RELN_5end |
Coexpression cluster: | C2873_cerebellum_pineal_mesothelioma_Endothelial_Lymphatic_merkel_chronic |
Association with transcript: | -82bp_to_ENST00000343529, ENST00000424685, ENST00000424828, ENST00000428762, ENST00000448171, NM_005045, NM_173054, uc003vca.2, uc010liz.2_5end |
EntrezGene: | RELN |
HGNC: | 9957 |
UniProt: | P78509F8WF74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 8.28e-11 | 3 |
ciliated epithelial cell | 8.28e-11 | 3 |
multi-ciliated epithelial cell | 8.28e-11 | 3 |
non-pigmented ciliary epithelial cell | 8.28e-11 | 3 |
lymphangioblast | 4.23e-10 | 6 |
endothelial cell of lymphatic vessel | 4.23e-10 | 6 |
vascular lymphangioblast | 4.23e-10 | 6 |
Merkel cell | 2.99e-08 | 2 |