FFCP PHASE1:Hg19::chr5:178422299..178422326,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2916 | |EntrezGene=2916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4598 | |HGNC=4598 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000517717_5end | |association_with_transcript=0bp_to_ENST00000517717_5end | ||
|cluster_id=chr5:178422299..178422326,- | |||
|coexpression_cluster_id=C87 | |coexpression_cluster_id=C87 | ||
|description=CAGE_peak_1_at_GRM6_5end | |description=CAGE_peak_1_at_GRM6_5end | ||
|id=chr5:178422299..178422326,- | |id=chr5:178422299..178422326,- | ||
|ontology_enrichment_celltype=CL:0000632!3.28e-07!2 | |ontology_enrichment_celltype=CL:0000632!3.28e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000306;1.70e-09;4!CL:0002222;1.70e-09;4!CL:0002224;1.70e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.70e-09,4;CL:0002222,1.70e-09,4;CL:0002224,1.70e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;8.74e-45;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@GRM6 | |short_description=p1@GRM6 | ||
}} | }} |
Latest revision as of 08:09, 17 September 2015
Short description: | p1@GRM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRM6_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | 0bp_to_ENST00000517717_5end |
EntrezGene: | GRM6 |
HGNC: | 4598 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.70e-09 | 4 |
vertebrate lens cell | 1.70e-09 | 4 |
lens epithelial cell | 1.70e-09 | 4 |