FFCP PHASE1:Hg19::chr4:6202247..6202290,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152789 | |EntrezGene=152789 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26460 | |HGNC=26460 | ||
|TSSclassifier=strong | |||
|UniProt=B4DG10,F2Z2K5 | |UniProt=B4DG10,F2Z2K5 | ||
|association_with_transcript=0bp_to_ENST00000409021,ENST00000409371,ENST00000429819,ENST00000473053_5end | |association_with_transcript=0bp_to_ENST00000409021,ENST00000409371,ENST00000429819,ENST00000473053_5end | ||
|cluster_id=chr4:6202247..6202290,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_JAKMIP1_5end | |description=CAGE_peak_1_at_JAKMIP1_5end | ||
|id=chr4:6202247..6202290,- | |id=chr4:6202247..6202290,- | ||
|ontology_enrichment_celltype=CL:0000084!1.08e-16!25;CL:0000827!1.08e-16!25;CL:0000838!7.15e-16!52;CL:0000542!2.75e-15!53;CL:0000051!2.75e-15!53;CL:0000791!3.16e-13!18;CL:0000789!3.16e-13!18;CL:0002420!3.16e-13!18;CL:0002419!3.16e-13!18;CL:0000790!3.16e-13!18;CL:0000625!4.07e-09!11 | |ontology_enrichment_celltype=CL:0000084!1.08e-16!25;CL:0000827!1.08e-16!25;CL:0000838!7.15e-16!52;CL:0000542!2.75e-15!53;CL:0000051!2.75e-15!53;CL:0000791!3.16e-13!18;CL:0000789!3.16e-13!18;CL:0002420!3.16e-13!18;CL:0002419!3.16e-13!18;CL:0000790!3.16e-13!18;CL:0000625!4.07e-09!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.41e-22;25!CL:0000791;2.26e-17;18!CL:0000789;2.26e-17;18!CL:0002419;2.26e-17;18!CL:0000625;8.11e-12;11!CL:0000542;7.42e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.34e-22,25;CL:0000827,2.34e-22,25;CL:0000838,7.51e-18,52;CL:0000791,2.13e-17,18;CL:0000789,2.13e-17,18;CL:0002420,2.13e-17,18;CL:0002419,2.13e-17,18;CL:0000790,2.13e-17,18;CL:0000542,2.69e-17,53;CL:0000051,2.69e-17,53;CL:0000625,8.08e-12,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.26e-17;18!UBERON:0006601;1.00e-10;82!CL:0000051;7.42e-10;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.69e-49!115;UBERON:0001049!2.65e-33!57;UBERON:0005068!2.65e-33!57;UBERON:0006241!2.65e-33!57;UBERON:0007135!2.65e-33!57;UBERON:0005743!4.52e-33!86;UBERON:0001017!6.86e-33!82;UBERON:0000073!3.27e-32!94;UBERON:0001016!3.27e-32!94;UBERON:0002780!4.43e-28!41;UBERON:0001890!4.43e-28!41;UBERON:0006240!4.43e-28!41;UBERON:0003080!5.36e-27!42;UBERON:0002616!1.06e-26!59;UBERON:0000955!2.20e-26!69;UBERON:0006238!2.20e-26!69;UBERON:0003075!1.06e-23!86;UBERON:0007284!1.06e-23!86;UBERON:0001893!2.40e-23!34;UBERON:0002020!2.80e-23!34;UBERON:0003528!2.80e-23!34;UBERON:0002791!1.98e-22!33;UBERON:0002346!2.49e-22!90;UBERON:0001869!3.36e-22!32;UBERON:0002619!1.90e-19!22;UBERON:0001950!9.89e-18!20;UBERON:0003056!1.17e-17!61;UBERON:0000956!5.45e-16!25;UBERON:0000203!5.45e-16!25;UBERON:0000153!5.16e-12!129;UBERON:0007811!5.16e-12!129;UBERON:0004121!6.29e-12!169;UBERON:0000924!1.77e-11!173;UBERON:0006601!1.77e-11!173;UBERON:0000033!2.95e-11!123;UBERON:0000178!4.70e-10!15;UBERON:0000179!4.70e-10!15;UBERON:0000463!4.70e-10!15;UBERON:0002420!3.23e-09!9;UBERON:0007245!3.23e-09!9;UBERON:0010009!3.23e-09!9;UBERON:0010011!3.23e-09!9;UBERON:0000454!3.23e-09!9;UBERON:0002308!6.68e-09!9;UBERON:0000125!6.68e-09!9;UBERON:0003076!1.46e-07!15;UBERON:0003057!1.46e-07!15;UBERON:0009663!1.89e-07!7;UBERON:0000200!7.35e-07!6 | |ontology_enrichment_uberon=UBERON:0007023!1.69e-49!115;UBERON:0001049!2.65e-33!57;UBERON:0005068!2.65e-33!57;UBERON:0006241!2.65e-33!57;UBERON:0007135!2.65e-33!57;UBERON:0005743!4.52e-33!86;UBERON:0001017!6.86e-33!82;UBERON:0000073!3.27e-32!94;UBERON:0001016!3.27e-32!94;UBERON:0002780!4.43e-28!41;UBERON:0001890!4.43e-28!41;UBERON:0006240!4.43e-28!41;UBERON:0003080!5.36e-27!42;UBERON:0002616!1.06e-26!59;UBERON:0000955!2.20e-26!69;UBERON:0006238!2.20e-26!69;UBERON:0003075!1.06e-23!86;UBERON:0007284!1.06e-23!86;UBERON:0001893!2.40e-23!34;UBERON:0002020!2.80e-23!34;UBERON:0003528!2.80e-23!34;UBERON:0002791!1.98e-22!33;UBERON:0002346!2.49e-22!90;UBERON:0001869!3.36e-22!32;UBERON:0002619!1.90e-19!22;UBERON:0001950!9.89e-18!20;UBERON:0003056!1.17e-17!61;UBERON:0000956!5.45e-16!25;UBERON:0000203!5.45e-16!25;UBERON:0000153!5.16e-12!129;UBERON:0007811!5.16e-12!129;UBERON:0004121!6.29e-12!169;UBERON:0000924!1.77e-11!173;UBERON:0006601!1.77e-11!173;UBERON:0000033!2.95e-11!123;UBERON:0000178!4.70e-10!15;UBERON:0000179!4.70e-10!15;UBERON:0000463!4.70e-10!15;UBERON:0002420!3.23e-09!9;UBERON:0007245!3.23e-09!9;UBERON:0010009!3.23e-09!9;UBERON:0010011!3.23e-09!9;UBERON:0000454!3.23e-09!9;UBERON:0002308!6.68e-09!9;UBERON:0000125!6.68e-09!9;UBERON:0003076!1.46e-07!15;UBERON:0003057!1.46e-07!15;UBERON:0009663!1.89e-07!7;UBERON:0000200!7.35e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.38e-28;41!UBERON:0001890;8.38e-28;41!UBERON:0001893;1.92e-27;34!UBERON:0001869;2.72e-27;32!UBERON:0003528;3.50e-27;34!UBERON:0002020;3.50e-27;34!UBERON:0002791;6.96e-27;32!UBERON:0002619;3.88e-26;22!UBERON:0000073;4.33e-25;53!UBERON:0002616;4.33e-25;53!UBERON:0001950;8.53e-24;20!UBERON:0000956;4.23e-22;25!UBERON:0000203;4.23e-22;25!UBERON:0000955;1.40e-17;68!UBERON:0001017;1.91e-16;75!UBERON:0001016;2.19e-15;83!UBERON:0000178;4.34e-13;15!UBERON:0000179;4.34e-13;15!UBERON:0000463;4.34e-13;15!UBERON:0002420;5.82e-12;9!UBERON:0007245;5.82e-12;9!UBERON:0010009;5.82e-12;9!UBERON:0010011;5.82e-12;9!UBERON:0000454;5.82e-12;9!UBERON:0000125;1.52e-11;9!UBERON:0002308;1.52e-11;9!UBERON:0007023;3.02e-11;114!UBERON:0009663;1.44e-09;7!UBERON:0000200;9.23e-09;6!UBERON:0001894;8.19e-08;7!UBERON:0000349;1.23e-07;5!UBERON:0002021;1.54e-07;5!UBERON:0001872;1.89e-07;5!UBERON:0001871;2.71e-07;6!UBERON:0002298;2.84e-07;6!UBERON:0004732;3.81e-07;13!UBERON:0000369;7.42e-07;4!UBERON:0002435;7.42e-07;4!UBERON:0000204;7.42e-07;4 | |||
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| ||
|short_description=p1@JAKMIP1 | |short_description=p1@JAKMIP1 | ||
}} | }} |
Latest revision as of 04:15, 18 September 2015
Short description: | p1@JAKMIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_JAKMIP1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000409021, ENST00000409371, ENST00000429819, ENST00000473053_5end |
EntrezGene: | JAKMIP1 |
HGNC: | 26460 |
UniProt: | B4DG10F2Z2K5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.34e-22 | 25 |
pro-T cell | 2.34e-22 | 25 |
lymphoid lineage restricted progenitor cell | 7.51e-18 | 52 |
mature alpha-beta T cell | 2.13e-17 | 18 |
alpha-beta T cell | 2.13e-17 | 18 |
immature T cell | 2.13e-17 | 18 |
mature T cell | 2.13e-17 | 18 |
immature alpha-beta T cell | 2.13e-17 | 18 |
lymphocyte | 2.69e-17 | 53 |
common lymphoid progenitor | 2.69e-17 | 53 |
CD8-positive, alpha-beta T cell | 8.08e-12 | 11 |