FFCP PHASE1:Hg19::chr4:46995726..46995765,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2560 | |EntrezGene=2560 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4081 | |HGNC=4081 | ||
|TSSclassifier=strong | |||
|UniProt=D6REM0 | |UniProt=D6REM0 | ||
|association_with_transcript=0bp_to_ENST00000513567_5end | |association_with_transcript=0bp_to_ENST00000513567_5end | ||
|cluster_id=chr4:46995726..46995765,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_5_at_GABRB1_5end | |description=CAGE_peak_5_at_GABRB1_5end | ||
|id=chr4:46995726..46995765,+ | |id=chr4:46995726..46995765,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.04e-14;2!UBERON:0006601;8.22e-13;82!UBERON:0004140;8.68e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.79e-73!57;UBERON:0005068!2.79e-73!57;UBERON:0006241!2.79e-73!57;UBERON:0007135!2.79e-73!57;UBERON:0001869!1.73e-70!32;UBERON:0002780!1.76e-70!41;UBERON:0001890!1.76e-70!41;UBERON:0006240!1.76e-70!41;UBERON:0003080!1.25e-68!42;UBERON:0001893!5.42e-66!34;UBERON:0002020!1.21e-65!34;UBERON:0003528!1.21e-65!34;UBERON:0002791!3.68e-63!33;UBERON:0002616!5.32e-63!59;UBERON:0001017!1.07e-58!82;UBERON:0005743!3.28e-58!86;UBERON:0000955!5.17e-58!69;UBERON:0006238!5.17e-58!69;UBERON:0002619!2.33e-57!22;UBERON:0000073!2.07e-54!94;UBERON:0001016!2.07e-54!94;UBERON:0003075!3.81e-53!86;UBERON:0007284!3.81e-53!86;UBERON:0002346!4.64e-53!90;UBERON:0001950!1.86e-51!20;UBERON:0000956!4.89e-50!25;UBERON:0000203!4.89e-50!25;UBERON:0003056!1.20e-47!61;UBERON:0007023!1.75e-39!115;UBERON:0000033!8.29e-34!123;UBERON:0000153!9.42e-32!129;UBERON:0007811!9.42e-32!129;UBERON:0000924!1.24e-27!173;UBERON:0006601!1.24e-27!173;UBERON:0004121!4.98e-27!169;UBERON:0002420!2.66e-22!9;UBERON:0007245!2.66e-22!9;UBERON:0010009!2.66e-22!9;UBERON:0010011!2.66e-22!9;UBERON:0000454!2.66e-22!9;UBERON:0000200!1.66e-19!6;UBERON:0001871!5.30e-19!7;UBERON:0002308!1.14e-16!9;UBERON:0000125!1.14e-16!9;UBERON:0000025!1.34e-16!194;UBERON:0000349!1.46e-16!5;UBERON:0009663!1.77e-16!7;UBERON:0001872!3.18e-16!5;UBERON:0000369!7.46e-14!4;UBERON:0002435!7.46e-14!4;UBERON:0000204!7.46e-14!4;UBERON:0010082!7.46e-14!4;UBERON:0004111!3.30e-12!241;UBERON:0000064!8.00e-11!219;UBERON:0005383!9.11e-11!3;UBERON:0005382!9.11e-11!3;UBERON:0002021!1.34e-10!5;UBERON:0002771!1.38e-10!3;UBERON:0000477!3.84e-10!286;UBERON:0000483!3.37e-09!309;UBERON:0000119!5.20e-09!312;UBERON:0003076!1.46e-08!15;UBERON:0003057!1.46e-08!15;UBERON:0001870!6.48e-08!2;UBERON:0001873!9.87e-08!2;UBERON:0010122!9.87e-08!2;UBERON:0001876!1.24e-07!2;UBERON:0001954!1.59e-07!2;UBERON:0003022!1.59e-07!2;UBERON:0002421!1.59e-07!2;UBERON:0002600!1.59e-07!2;UBERON:0001875!3.27e-07!2;UBERON:0006514!3.27e-07!2;UBERON:0001894!6.37e-07!7;UBERON:0006222!6.37e-07!7;UBERON:0000007!7.01e-07!2;UBERON:0002360!8.14e-07!2;UBERON:0000094!8.14e-07!2;UBERON:0007645!8.14e-07!2;UBERON:0000475!9.30e-07!365 | |ontology_enrichment_uberon=UBERON:0001049!2.79e-73!57;UBERON:0005068!2.79e-73!57;UBERON:0006241!2.79e-73!57;UBERON:0007135!2.79e-73!57;UBERON:0001869!1.73e-70!32;UBERON:0002780!1.76e-70!41;UBERON:0001890!1.76e-70!41;UBERON:0006240!1.76e-70!41;UBERON:0003080!1.25e-68!42;UBERON:0001893!5.42e-66!34;UBERON:0002020!1.21e-65!34;UBERON:0003528!1.21e-65!34;UBERON:0002791!3.68e-63!33;UBERON:0002616!5.32e-63!59;UBERON:0001017!1.07e-58!82;UBERON:0005743!3.28e-58!86;UBERON:0000955!5.17e-58!69;UBERON:0006238!5.17e-58!69;UBERON:0002619!2.33e-57!22;UBERON:0000073!2.07e-54!94;UBERON:0001016!2.07e-54!94;UBERON:0003075!3.81e-53!86;UBERON:0007284!3.81e-53!86;UBERON:0002346!4.64e-53!90;UBERON:0001950!1.86e-51!20;UBERON:0000956!4.89e-50!25;UBERON:0000203!4.89e-50!25;UBERON:0003056!1.20e-47!61;UBERON:0007023!1.75e-39!115;UBERON:0000033!8.29e-34!123;UBERON:0000153!9.42e-32!129;UBERON:0007811!9.42e-32!129;UBERON:0000924!1.24e-27!173;UBERON:0006601!1.24e-27!173;UBERON:0004121!4.98e-27!169;UBERON:0002420!2.66e-22!9;UBERON:0007245!2.66e-22!9;UBERON:0010009!2.66e-22!9;UBERON:0010011!2.66e-22!9;UBERON:0000454!2.66e-22!9;UBERON:0000200!1.66e-19!6;UBERON:0001871!5.30e-19!7;UBERON:0002308!1.14e-16!9;UBERON:0000125!1.14e-16!9;UBERON:0000025!1.34e-16!194;UBERON:0000349!1.46e-16!5;UBERON:0009663!1.77e-16!7;UBERON:0001872!3.18e-16!5;UBERON:0000369!7.46e-14!4;UBERON:0002435!7.46e-14!4;UBERON:0000204!7.46e-14!4;UBERON:0010082!7.46e-14!4;UBERON:0004111!3.30e-12!241;UBERON:0000064!8.00e-11!219;UBERON:0005383!9.11e-11!3;UBERON:0005382!9.11e-11!3;UBERON:0002021!1.34e-10!5;UBERON:0002771!1.38e-10!3;UBERON:0000477!3.84e-10!286;UBERON:0000483!3.37e-09!309;UBERON:0000119!5.20e-09!312;UBERON:0003076!1.46e-08!15;UBERON:0003057!1.46e-08!15;UBERON:0001870!6.48e-08!2;UBERON:0001873!9.87e-08!2;UBERON:0010122!9.87e-08!2;UBERON:0001876!1.24e-07!2;UBERON:0001954!1.59e-07!2;UBERON:0003022!1.59e-07!2;UBERON:0002421!1.59e-07!2;UBERON:0002600!1.59e-07!2;UBERON:0001875!3.27e-07!2;UBERON:0006514!3.27e-07!2;UBERON:0001894!6.37e-07!7;UBERON:0006222!6.37e-07!7;UBERON:0000007!7.01e-07!2;UBERON:0002360!8.14e-07!2;UBERON:0000094!8.14e-07!2;UBERON:0007645!8.14e-07!2;UBERON:0000475!9.30e-07!365 | ||
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|short_description=p5@GABRB1 | |short_description=p5@GABRB1 | ||
}} | }} |
Latest revision as of 21:49, 17 September 2015
Short description: | p5@GABRB1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GABRB1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000513567_5end |
EntrezGene: | GABRB1 |
HGNC: | 4081 |
UniProt: | D6REM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data