FFCP PHASE1:Hg19::chr4:144275173..144275206,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:144275173..144275206,+ | |||
|coexpression_cluster_id=C629 | |coexpression_cluster_id=C629 | ||
|description=CAGE_peak_at_chr4:144275173..144275206,+ | |description=CAGE_peak_at_chr4:144275173..144275206,+ | ||
|id=chr4:144275173..144275206,+ | |id=chr4:144275173..144275206,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002537;2.38e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.96e-11,5 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.64e-07;1!UBERON:0001045;3.71e-07;1!UBERON:0010115;7.08e-07;1!UBERON:0004140;7.08e-07;1!UBERON:0004874;7.08e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-43!115;UBERON:0002346!1.12e-14!90;UBERON:0000924!1.30e-14!173;UBERON:0006601!1.30e-14!173;UBERON:0001049!2.15e-14!57;UBERON:0005068!2.15e-14!57;UBERON:0006241!2.15e-14!57;UBERON:0007135!2.15e-14!57;UBERON:0004121!1.07e-13!169;UBERON:0003075!1.13e-13!86;UBERON:0007284!1.13e-13!86;UBERON:0001017!1.30e-13!82;UBERON:0005743!1.95e-13!86;UBERON:0003080!5.26e-13!42;UBERON:0002619!1.58e-12!22;UBERON:0001950!2.61e-12!20;UBERON:0002780!4.69e-12!41;UBERON:0001890!4.69e-12!41;UBERON:0006240!4.69e-12!41;UBERON:0000153!5.00e-12!129;UBERON:0007811!5.00e-12!129;UBERON:0001893!2.40e-11!34;UBERON:0000073!3.03e-11!94;UBERON:0001016!3.03e-11!94;UBERON:0000955!4.51e-11!69;UBERON:0006238!4.51e-11!69;UBERON:0001869!5.57e-11!32;UBERON:0000033!6.69e-11!123;UBERON:0000956!1.36e-10!25;UBERON:0000203!1.36e-10!25;UBERON:0002791!1.37e-10!33;UBERON:0002616!3.19e-10!59;UBERON:0002020!3.82e-10!34;UBERON:0003528!3.82e-10!34;UBERON:0000200!1.09e-09!6;UBERON:0000064!3.32e-09!219;UBERON:0003056!1.06e-08!61;UBERON:0000062!9.02e-07!511 | |ontology_enrichment_uberon=UBERON:0007023!1.05e-43!115;UBERON:0002346!1.12e-14!90;UBERON:0000924!1.30e-14!173;UBERON:0006601!1.30e-14!173;UBERON:0001049!2.15e-14!57;UBERON:0005068!2.15e-14!57;UBERON:0006241!2.15e-14!57;UBERON:0007135!2.15e-14!57;UBERON:0004121!1.07e-13!169;UBERON:0003075!1.13e-13!86;UBERON:0007284!1.13e-13!86;UBERON:0001017!1.30e-13!82;UBERON:0005743!1.95e-13!86;UBERON:0003080!5.26e-13!42;UBERON:0002619!1.58e-12!22;UBERON:0001950!2.61e-12!20;UBERON:0002780!4.69e-12!41;UBERON:0001890!4.69e-12!41;UBERON:0006240!4.69e-12!41;UBERON:0000153!5.00e-12!129;UBERON:0007811!5.00e-12!129;UBERON:0001893!2.40e-11!34;UBERON:0000073!3.03e-11!94;UBERON:0001016!3.03e-11!94;UBERON:0000955!4.51e-11!69;UBERON:0006238!4.51e-11!69;UBERON:0001869!5.57e-11!32;UBERON:0000033!6.69e-11!123;UBERON:0000956!1.36e-10!25;UBERON:0000203!1.36e-10!25;UBERON:0002791!1.37e-10!33;UBERON:0002616!3.19e-10!59;UBERON:0002020!3.82e-10!34;UBERON:0003528!3.82e-10!34;UBERON:0000200!1.09e-09!6;UBERON:0000064!3.32e-09!219;UBERON:0003056!1.06e-08!61;UBERON:0000062!9.02e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.63e-15;17!UBERON:0000059;2.59e-13;11!UBERON:0002771;2.28e-12;2!UBERON:0005409;1.13e-11;22!UBERON:0004921;1.41e-11;33!UBERON:0001155;1.10e-10;9!UBERON:0005631;1.10e-09;10!UBERON:0000158;1.10e-09;10!UBERON:0000200;4.97e-09;6!UBERON:0001723;7.19e-09;3!UBERON:0001033;7.19e-09;3!UBERON:0000305;3.11e-08;7!UBERON:0002372;2.59e-07;1!UBERON:0001961;2.59e-07;1!UBERON:0001744;2.59e-07;1!UBERON:0001042;2.59e-07;1!UBERON:0001735;2.59e-07;1!UBERON:0005795;2.92e-07;1!UBERON:0007029;3.71e-07;1!UBERON:0001154;3.71e-07;1!UBERON:0001153;3.71e-07;1!UBERON:0009854;3.71e-07;1!UBERON:0002363;7.08e-07;1!UBERON:0003112;7.08e-07;1!UBERON:0000989;7.08e-07;1!UBERON:0008811;7.08e-07;1!UBERON:0011158;7.08e-07;1!UBERON:0003128;7.08e-07;1!UBERON:0001703;7.08e-07;1!UBERON:0002241;7.08e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.76e-15,17;UBERON:0007023,5.63e-14,114;UBERON:0000059,2.98e-13,11;UBERON:0002771,2.57e-12,2;UBERON:0001155,1.28e-10,9;UBERON:0005409,3.26e-10,25;UBERON:0000200,5.97e-09,6;UBERON:0001723,8.41e-09,3;UBERON:0001033,8.41e-09,3;UBERON:0010056,8.41e-09,3;UBERON:0000305,2.72e-08,7;UBERON:0002372,2.52e-07,1;UBERON:0001961,2.52e-07,1;UBERON:0001744,2.52e-07,1;UBERON:0001735,2.52e-07,1;UBERON:0004871,2.63e-07,8;UBERON:0001154,3.40e-07,1;UBERON:0001153,3.40e-07,1;UBERON:0001045,3.40e-07,1;UBERON:0007029,3.82e-07,1;UBERON:0000989,4.57e-07,1;UBERON:0008811,4.57e-07,1;UBERON:0006258,4.57e-07,1;UBERON:0005876,4.57e-07,1;UBERON:0004874,4.57e-07,1;UBERON:0002363,4.85e-07,1;UBERON:0007645,4.85e-07,1;UBERON:0007647,4.85e-07,1;UBERON:0010115,4.85e-07,1;UBERON:0005631,5.63e-07,14;UBERON:0000158,5.63e-07,14;UBERON:0003112,8.67e-07,1;UBERON:0011158,8.67e-07,1;UBERON:0003128,8.67e-07,1;UBERON:0001703,8.67e-07,1;UBERON:0002241,8.67e-07,1;UBERON:0004761,8.67e-07,1;UBERON:0009617,8.67e-07,1 | |||
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|short_description=p@chr4:144275173..144275206,+ | |short_description=p@chr4:144275173..144275206,+ | ||
}} | }} |
Latest revision as of 01:57, 30 July 2015
Short description: | p@chr4:144275173..144275206, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:144275173..144275206, + |
Coexpression cluster: | C629_esophagus_amniotic_tongue_throat_tonsil_uterus_salivary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.96e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.76e-15 | 17 |
adult organism | 5.63e-14 | 114 |
large intestine | 2.98e-13 | 11 |
middle temporal gyrus | 2.57e-12 | 2 |
colon | 1.28e-10 | 9 |
gastrointestinal system | 3.26e-10 | 25 |
gyrus | 5.97e-09 | 6 |
tongue | 8.41e-09 | 3 |
gustatory system | 8.41e-09 | 3 |
future tongue | 8.41e-09 | 3 |
amnion | 2.72e-08 | 7 |
tonsil | 2.52e-07 | 1 |
mucosa-associated lymphoid tissue | 2.52e-07 | 1 |
lymphoid tissue | 2.52e-07 | 1 |
tonsillar ring | 2.52e-07 | 1 |
somatic layer of lateral plate mesoderm | 2.63e-07 | 8 |
vermiform appendix | 3.40e-07 | 1 |
caecum | 3.40e-07 | 1 |
midgut | 3.40e-07 | 1 |
surface | 3.82e-07 | 1 |
penis | 4.57e-07 | 1 |
intromittent organ | 4.57e-07 | 1 |
lateral plate mesenchyme | 4.57e-07 | 1 |
undifferentiated genital tubercle | 4.57e-07 | 1 |
somatopleure | 4.57e-07 | 1 |
dura mater | 4.85e-07 | 1 |
future meninx | 4.85e-07 | 1 |
ectomeninx | 4.85e-07 | 1 |
future dura mater | 4.85e-07 | 1 |
extraembryonic membrane | 5.63e-07 | 14 |
membranous layer | 5.63e-07 | 14 |
olfactory region | 8.67e-07 | 1 |
primary subdivision of skull | 8.67e-07 | 1 |
cranium | 8.67e-07 | 1 |
neurocranium | 8.67e-07 | 1 |
chondrocranium | 8.67e-07 | 1 |
cartilaginous neurocranium | 8.67e-07 | 1 |
head paraxial mesoderm | 8.67e-07 | 1 |