FFCP PHASE1:Hg19::chr4:134076121..134076131,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57575 | |EntrezGene=57575 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13404 | |HGNC=13404 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=73bp_to_ENST00000511112_5end | |association_with_transcript=73bp_to_ENST00000511112_5end | ||
|cluster_id=chr4:134076121..134076131,+ | |||
|coexpression_cluster_id=C2776 | |coexpression_cluster_id=C2776 | ||
|description=CAGE_peak_15_at_PCDH10_5end | |description=CAGE_peak_15_at_PCDH10_5end | ||
|id=chr4:134076121..134076131,+ | |id=chr4:134076121..134076131,+ | ||
|ontology_enrichment_celltype=CL:0002150!7.62e-14!3;CL:0000861!7.62e-14!3 | |ontology_enrichment_celltype=CL:0002150!7.62e-14!3;CL:0000861!7.62e-14!3 | ||
|ontology_enrichment_celltype_v019=CL:0002127;2.66e-18;1!CL:0000911;2.66e-18;1!CL:0000814;2.66e-18;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.66e-18,1;CL:0000914,2.66e-18,1;CL:0000911,2.66e-18,1;CL:0000814,2.66e-18,1;CL:0002042,2.66e-18,1;CL:0002039,2.66e-18,1;CL:0002040,2.66e-18,1;CL:0002041,2.66e-18,1;CL:0000893,7.98e-10,2;CL:0002489,7.98e-10,2;CL:0000809,7.98e-10,2;CL:0000808,7.98e-10,2;CL:0000894,7.98e-10,2;CL:0000806,7.98e-10,2;CL:0000807,7.98e-10,2;CL:0000805,7.98e-10,2;CL:0002425,7.98e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.35e-36;29!CL:0002425;7.98e-10;2 | |||
|ontology_enrichment_disease=DOID:0050687!7.44e-07!143 | |ontology_enrichment_disease=DOID:0050687!7.44e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:6193;1.22e-17;1!DOID:3350;1.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.70e-17,1;DOID:0050687,9.11e-11,143;DOID:305,1.78e-09,106;DOID:3350,2.02e-09,2;DOID:162,1.34e-07,235;DOID:14566,2.03e-07,239 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001737;2.92e-116;9!UBERON:0001557;2.92e-116;9!UBERON:0000072;7.72e-26;37!UBERON:0000065;2.06e-23;44!UBERON:0001004;8.49e-13;65!UBERON:0002702;1.71e-09;2!UBERON:0001870;9.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.87e-116,9;UBERON:0001557,8.65e-70,19;UBERON:0000072,5.95e-28,47;UBERON:0008947,2.25e-27,38;UBERON:0003258,2.25e-27,38;UBERON:0000065,2.94e-24,54;UBERON:0001004,1.53e-17,74;UBERON:0001041,8.02e-15,87;UBERON:0004921,1.21e-10,118;UBERON:0002702,1.71e-09,2;UBERON:0001007,1.56e-08,145;UBERON:0001555,1.56e-08,145;UBERON:0007026,1.56e-08,145;UBERON:0011216,5.99e-08,223;UBERON:0001048,1.03e-07,160;UBERON:0004119,1.16e-07,160;UBERON:0000925,1.16e-07,160;UBERON:0006595,1.16e-07,160;UBERON:0001870,9.64e-07,3 | |||
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| ||
|short_description=p15@PCDH10 | |short_description=p15@PCDH10 | ||
}} | }} |
Latest revision as of 04:21, 25 September 2015
Short description: | p15@PCDH10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_PCDH10_5end |
Coexpression cluster: | C2776_NK_Hep2_plasma_medial_neuroblastoma_caudate_frontal |
Association with transcript: | 73bp_to_ENST00000511112_5end |
EntrezGene: | PCDH10 |
HGNC: | 13404 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.66e-18 | 1 |
immature NK T cell | 2.66e-18 | 1 |
effector T cell | 2.66e-18 | 1 |
mature NK T cell | 2.66e-18 | 1 |
immature NK T cell stage IV | 2.66e-18 | 1 |
immature NK T cell stage I | 2.66e-18 | 1 |
immature NK T cell stage II | 2.66e-18 | 1 |
immature NK T cell stage III | 2.66e-18 | 1 |
thymocyte | 7.98e-10 | 2 |
double negative thymocyte | 7.98e-10 | 2 |
double-positive, alpha-beta thymocyte | 7.98e-10 | 2 |
DN4 thymocyte | 7.98e-10 | 2 |
DN1 thymic pro-T cell | 7.98e-10 | 2 |
DN2 thymocyte | 7.98e-10 | 2 |
DN3 thymocyte | 7.98e-10 | 2 |
immature single positive thymocyte | 7.98e-10 | 2 |
early T lineage precursor | 7.98e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.87e-116 | 9 |
upper respiratory tract | 8.65e-70 | 19 |
segment of respiratory tract | 5.95e-28 | 47 |
respiratory primordium | 2.25e-27 | 38 |
endoderm of foregut | 2.25e-27 | 38 |
respiratory tract | 2.94e-24 | 54 |
respiratory system | 1.53e-17 | 74 |
foregut | 8.02e-15 | 87 |
subdivision of digestive tract | 1.21e-10 | 118 |
middle frontal gyrus | 1.71e-09 | 2 |
digestive system | 1.56e-08 | 145 |
digestive tract | 1.56e-08 | 145 |
primitive gut | 1.56e-08 | 145 |
organ system subdivision | 5.99e-08 | 223 |
primordium | 1.03e-07 | 160 |
endoderm-derived structure | 1.16e-07 | 160 |
endoderm | 1.16e-07 | 160 |
presumptive endoderm | 1.16e-07 | 160 |
frontal cortex | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.70e-17 | 1 |
cell type cancer | 9.11e-11 | 143 |
carcinoma | 1.78e-09 | 106 |
mesenchymal cell neoplasm | 2.02e-09 | 2 |
cancer | 1.34e-07 | 235 |
disease of cellular proliferation | 2.03e-07 | 239 |