FFCP PHASE1:Hg19::chr4:10030724..10030740,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56606 | |EntrezGene=56606 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13446 | |HGNC=13446 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=183bp_to_ENST00000509214_5end | |association_with_transcript=183bp_to_ENST00000509214_5end | ||
|cluster_id=chr4:10030724..10030740,- | |||
|coexpression_cluster_id=C37 | |coexpression_cluster_id=C37 | ||
|description=CAGE_peak_9_at_SLC2A9_5end | |description=CAGE_peak_9_at_SLC2A9_5end | ||
|id=chr4:10030724..10030740,- | |id=chr4:10030724..10030740,- | ||
|ontology_enrichment_celltype=CL:0000746!2.15e-09!3;CL:0000513!2.15e-09!3;CL:0000737!3.02e-07!4 | |ontology_enrichment_celltype=CL:0000746!2.15e-09!3;CL:0000513!2.15e-09!3;CL:0000737!3.02e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000746;1.04e-08;3!CL:0002615;1.35e-08;3!CL:0000737;7.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.04e-08,3;CL:0000513,1.04e-08,3;CL:0002615,1.51e-08,3;CL:0000737,7.70e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.34e-23;1!UBERON:0005754;1.67e-23;1!UBERON:0006298;2.62e-23;1!UBERON:0007297;1.85e-12;2!CL:0000513;1.04e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!5.51e-14!2;UBERON:0002530!1.18e-10!59;UBERON:0001044!2.49e-10!6;UBERON:0003293!2.49e-10!6;UBERON:0003294!2.49e-10!6;UBERON:0010047!2.49e-10!6;UBERON:0000167!2.49e-10!6;UBERON:0003408!2.83e-10!10;UBERON:0006947!1.67e-09!3;UBERON:0004054!1.67e-09!3;UBERON:0003101!2.29e-09!22;UBERON:0000079!2.29e-09!22;UBERON:0003937!3.09e-08!12;UBERON:0005399!3.09e-08!12;UBERON:0001831!7.03e-08!1;UBERON:0001567!7.03e-08!1;UBERON:0008801!7.03e-08!1;UBERON:0000998!7.50e-08!1;UBERON:0006868!7.50e-08!1;UBERON:0001736!8.54e-08!1;UBERON:0006298!8.54e-08!1;UBERON:0000161!9.57e-08!35;UBERON:0000475!9.88e-08!365;UBERON:0001000!1.18e-07!1;UBERON:0005352!1.18e-07!1;UBERON:0007023!1.25e-07!115;UBERON:0005418!1.25e-07!1;UBERON:0001389!1.25e-07!1;UBERON:0000026!1.25e-07!1;UBERON:0008784!1.25e-07!1;UBERON:0006058!1.25e-07!1;UBERON:0003663!1.25e-07!1;UBERON:0001383!1.25e-07!1;UBERON:0004256!1.25e-07!1;UBERON:0002529!1.25e-07!1;UBERON:0004708!1.25e-07!1;UBERON:0002101!1.25e-07!1;UBERON:0004709!1.25e-07!1;UBERON:0003661!1.25e-07!1;UBERON:0002471!1.25e-07!1;UBERON:0004357!1.25e-07!1;UBERON:0009872!1.25e-07!1;UBERON:0004347!1.25e-07!1;UBERON:0005420!1.25e-07!1;UBERON:0005732!1.25e-07!1;UBERON:0006057!1.25e-07!1;UBERON:0000978!1.25e-07!1;UBERON:0002103!1.25e-07!1;UBERON:0001665!1.25e-07!1;UBERON:0003823!1.25e-07!1;UBERON:0000154!1.25e-07!1;UBERON:0005733!1.25e-07!1;UBERON:0005730!1.25e-07!1;UBERON:0007029!1.33e-07!1;UBERON:0005904!2.50e-07!4;UBERON:0002372!3.40e-07!1;UBERON:0001961!3.40e-07!1;UBERON:0001744!3.40e-07!1;UBERON:0001735!3.40e-07!1 | |ontology_enrichment_uberon=UBERON:0001829!5.51e-14!2;UBERON:0002530!1.18e-10!59;UBERON:0001044!2.49e-10!6;UBERON:0003293!2.49e-10!6;UBERON:0003294!2.49e-10!6;UBERON:0010047!2.49e-10!6;UBERON:0000167!2.49e-10!6;UBERON:0003408!2.83e-10!10;UBERON:0006947!1.67e-09!3;UBERON:0004054!1.67e-09!3;UBERON:0003101!2.29e-09!22;UBERON:0000079!2.29e-09!22;UBERON:0003937!3.09e-08!12;UBERON:0005399!3.09e-08!12;UBERON:0001831!7.03e-08!1;UBERON:0001567!7.03e-08!1;UBERON:0008801!7.03e-08!1;UBERON:0000998!7.50e-08!1;UBERON:0006868!7.50e-08!1;UBERON:0001736!8.54e-08!1;UBERON:0006298!8.54e-08!1;UBERON:0000161!9.57e-08!35;UBERON:0000475!9.88e-08!365;UBERON:0001000!1.18e-07!1;UBERON:0005352!1.18e-07!1;UBERON:0007023!1.25e-07!115;UBERON:0005418!1.25e-07!1;UBERON:0001389!1.25e-07!1;UBERON:0000026!1.25e-07!1;UBERON:0008784!1.25e-07!1;UBERON:0006058!1.25e-07!1;UBERON:0003663!1.25e-07!1;UBERON:0001383!1.25e-07!1;UBERON:0004256!1.25e-07!1;UBERON:0002529!1.25e-07!1;UBERON:0004708!1.25e-07!1;UBERON:0002101!1.25e-07!1;UBERON:0004709!1.25e-07!1;UBERON:0003661!1.25e-07!1;UBERON:0002471!1.25e-07!1;UBERON:0004357!1.25e-07!1;UBERON:0009872!1.25e-07!1;UBERON:0004347!1.25e-07!1;UBERON:0005420!1.25e-07!1;UBERON:0005732!1.25e-07!1;UBERON:0006057!1.25e-07!1;UBERON:0000978!1.25e-07!1;UBERON:0002103!1.25e-07!1;UBERON:0001665!1.25e-07!1;UBERON:0003823!1.25e-07!1;UBERON:0000154!1.25e-07!1;UBERON:0005733!1.25e-07!1;UBERON:0005730!1.25e-07!1;UBERON:0007029!1.33e-07!1;UBERON:0005904!2.50e-07!4;UBERON:0002372!3.40e-07!1;UBERON:0001961!3.40e-07!1;UBERON:0001744!3.40e-07!1;UBERON:0001735!3.40e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;5.00e-45;2!UBERON:0001044;6.72e-34;6!UBERON:0003293;6.72e-34;6!UBERON:0003294;6.72e-34;6!UBERON:0010047;6.72e-34;6!UBERON:0003408;6.72e-34;6!UBERON:0000167;6.72e-34;6!UBERON:0001831;1.34e-23;1!UBERON:0001567;1.34e-23;1!UBERON:0000998;1.67e-23;1!UBERON:0006868;1.67e-23;1!UBERON:0001736;2.62e-23;1!UBERON:0001041;5.52e-15;14!UBERON:0004089;1.65e-12;2!UBERON:0001905;3.06e-12;2!UBERON:0002757;3.06e-12;2!UBERON:0010134;3.06e-12;2!UBERON:0005408;3.06e-12;2!UBERON:0001899;3.06e-12;2!UBERON:0002365;9.99e-12;31!UBERON:0002330;9.99e-12;31!UBERON:0000161;3.19e-11;19!UBERON:0000166;3.19e-11;19!UBERON:0002530;2.74e-09;57!UBERON:0006947;9.66e-09;3!UBERON:0004054;9.66e-09;3!UBERON:0000165;8.20e-08;28!UBERON:0005904;7.27e-07;4!UBERON:0003296;9.36e-07;4!UBERON:0010133;9.36e-07;4!UBERON:0002784;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,5.00e-45,2;UBERON:0001044,6.72e-34,6;UBERON:0003293,6.72e-34,6;UBERON:0003294,6.72e-34,6;UBERON:0010047,6.72e-34,6;UBERON:0000167,6.72e-34,6;UBERON:0001831,1.34e-23,1;UBERON:0001567,1.34e-23,1;UBERON:0008801,1.34e-23,1;UBERON:0000998,1.67e-23,1;UBERON:0006868,1.67e-23,1;UBERON:0001736,2.62e-23,1;UBERON:0006298,2.62e-23,1;UBERON:0003408,1.12e-20,10;UBERON:0002530,1.62e-13,59;UBERON:0004089,1.65e-12,2;UBERON:0001905,2.90e-12,2;UBERON:0002757,2.90e-12,2;UBERON:0010134,2.90e-12,2;UBERON:0005408,2.90e-12,2;UBERON:0001899,2.90e-12,2;UBERON:0002365,7.36e-12,31;UBERON:0002330,7.36e-12,31;UBERON:0000166,8.86e-10,22;UBERON:0002553,2.98e-09,61;UBERON:0006947,9.66e-09,3;UBERON:0004054,9.66e-09,3;UBERON:0000165,1.46e-07,29;UBERON:0000930,1.46e-07,29;UBERON:0005904,7.27e-07,4;UBERON:0003296,9.11e-07,4;UBERON:0010133,9.11e-07,4;UBERON:0002784,9.11e-07,4 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36560687762909,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,1.06502877754984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.0576616434307,0,0,0,1.07140367175657,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,34.8484160644425,0,0,7.62096690343672,0,0,0,0,0,0,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12856355064087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36560687762909,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,1.06502877754984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.0576616434307,0,0,0,1.07140367175657,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,34.8484160644425,0,0,7.62096690343672,0,0,0,0,0,0,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12856355064087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p9@SLC2A9 | |short_description=p9@SLC2A9 | ||
}} | }} |
Latest revision as of 01:24, 20 September 2015
Short description: | p9@SLC2A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLC2A9_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 183bp_to_ENST00000509214_5end |
EntrezGene: | SLC2A9 |
HGNC: | 13446 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.04e-08 | 3 |
cardiac muscle myoblast | 1.04e-08 | 3 |
adipocyte of omentum tissue | 1.51e-08 | 3 |
striated muscle cell | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 5.00e-45 | 2 |
saliva-secreting gland | 6.72e-34 | 6 |
gland of oral region | 6.72e-34 | 6 |
gland of foregut | 6.72e-34 | 6 |
oral gland | 6.72e-34 | 6 |
oral cavity | 6.72e-34 | 6 |
parotid gland | 1.34e-23 | 1 |
cheek | 1.34e-23 | 1 |
parotid gland primordium | 1.34e-23 | 1 |
seminal vesicle | 1.67e-23 | 1 |
seminal fluid secreting gland | 1.67e-23 | 1 |
submandibular gland | 2.62e-23 | 1 |
submandibular gland primordium | 2.62e-23 | 1 |
gland of gut | 1.12e-20 | 10 |
gland | 1.62e-13 | 59 |
midface | 1.65e-12 | 2 |
pineal body | 2.90e-12 | 2 |
regional part of epithalamus | 2.90e-12 | 2 |
secretory circumventricular organ | 2.90e-12 | 2 |
circumventricular organ | 2.90e-12 | 2 |
epithalamus | 2.90e-12 | 2 |
exocrine gland | 7.36e-12 | 31 |
exocrine system | 7.36e-12 | 31 |
oral opening | 8.86e-10 | 22 |
anatomical cavity | 2.98e-09 | 61 |
male genital duct | 9.66e-09 | 3 |
internal male genitalia | 9.66e-09 | 3 |
mouth | 1.46e-07 | 29 |
stomodeum | 1.46e-07 | 29 |
duct of male reproductive system | 7.27e-07 | 4 |
gland of diencephalon | 9.11e-07 | 4 |
neuroendocrine gland | 9.11e-07 | 4 |
regional part of diencephalon | 9.11e-07 | 4 |