FFCP PHASE1:Hg19::chr3:57875711..57875735,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7871 | |EntrezGene=7871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16643 | |HGNC=16643 | ||
|TSSclassifier=strong | |||
|UniProt=C9JPE6 | |UniProt=C9JPE6 | ||
|association_with_transcript=0bp_to_ENST00000442599,ENST00000459654,ENST00000472546,uc011bez.1,uc011bfa.1_5end | |association_with_transcript=0bp_to_ENST00000442599,ENST00000459654,ENST00000472546,uc011bez.1,uc011bfa.1_5end | ||
|cluster_id=chr3:57875711..57875735,+ | |||
|coexpression_cluster_id=C4339 | |coexpression_cluster_id=C4339 | ||
|description=CAGE_peak_3_at_SLMAP_5end | |description=CAGE_peak_3_at_SLMAP_5end | ||
|id=chr3:57875711..57875735,+ | |id=chr3:57875711..57875735,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;2.38e-10;65 | |||
|ontology_enrichment_disease=DOID:2394!4.52e-07!14 | |ontology_enrichment_disease=DOID:2394!4.52e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.94e-31!115;UBERON:0002346!5.52e-07!90 | |ontology_enrichment_uberon=UBERON:0007023!4.94e-31!115;UBERON:0002346!5.52e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0005904;1.31e-09;4!UBERON:0007100;1.05e-08;25!UBERON:0000160;1.41e-08;17!UBERON:0003978;3.61e-08;3!UBERON:0000946;3.61e-08;3!UBERON:0004151;4.24e-08;3!UBERON:0005409;6.92e-08;22!UBERON:0006947;8.85e-08;3!UBERON:0004054;8.85e-08;3!UBERON:0003135;6.18e-07;11!UBERON:0000059;7.77e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.14e-22,114;UBERON:0005904,1.40e-09,4;UBERON:0000160,1.29e-08,17;UBERON:0003978,3.49e-08,3;UBERON:0009751,3.49e-08,3;UBERON:0000946,3.49e-08,3;UBERON:0002523,3.49e-08,3;UBERON:0005983,3.49e-08,3;UBERON:0002165,3.49e-08,3;UBERON:0002062,3.49e-08,3;UBERON:0007280,3.49e-08,3;UBERON:0004151,4.10e-08,3;UBERON:0007100,7.94e-08,27;UBERON:0006947,9.48e-08,3;UBERON:0004054,9.48e-08,3;UBERON:0003135,6.39e-07,11;UBERON:0000059,6.83e-07,11;UBERON:0005409,9.21e-07,25 | |||
|phase1_expression=0.363356758541113,2.99740733447376,0.281908808191942,0,0.446961094427288,0,10.1319951267324,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.572471974262113,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0,0.50133791063589,0,0,0,0,0,0,2.42311289670768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.506522046658319,0,0.286836620748814,0,1.12135520028461,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0.612975591598039,0.45071417671979,0.567160915800105,0,0.213557388818567,0,0,0,0.257640540045629,0,0,0.194874010322397,0,0.460249493211497,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.23921608243556,0,0,0,0,0,0,0,4.43231780340257,0,0.823240336780769,0,3.19852753868291,0,0,0,0.299918973546171,0,0,0,1.67737398844108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,7.48695101510906,0.892144943985809,0.473107245101804,1.87426263988341,1.20378439891088,2.27407504055985,0,0,0.553107505625109,0,0,0,0,0,0,0,0,0,0.248107807818777,6.59886485138669,2.24528075546459,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,1.64865618636356,0,0,0,0,4.82051789532479,0,0.154048617114644,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,2.53103539774981,2.2875623270859,0,0,0,0,1.61885211824983,0.54907405947211,0.353437207037059,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0,0,1.62328301570163,0.6196469961995,0,2.15117028306077,3.53696547647236,2.85336841185,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05111450980652,0,0,0,0,0,0,0,0,0,0,0,4.98119970627674,16.3007510163377,0,0,0,0.311039587661807,0,0,0,90.9492199972528,0,0,0,0.278304294485554,0,0,0,2.17499872630438,0,0,0,0,0,0.347249989866585,0,0.241192877250816,1.52581736317083,1.21637185924347,0.886642856860642,0.658156191461918,0,0,18.2372112653999,0,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,14.6839557075543,17.7198742030751,0,0,0,0.202203398942031,7.2231988256891,0,0,0,0,8.2862724598372,7.25944296291983,0,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,11.357233435732,0,0,0,0,17.6520010008923,0,2.25980740780532,0,0,0.126621591911757,0,0,6.19013684744122,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0.429765441419957,0,30.4417817386757,53.1652183707106,10.7680953686522,1.59743200399193,7.2968428183217,33.6988900737228,71.6175816708502,6.12509802022086,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.945668487590378,0,0,0,0,27.8731177285613,20.5248510813284,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,1.06787412567695,3.45849471219265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0.155262956876259,0,0.265841714557995,1.5652351854352,2.70463696194993,0.380805212168795,0.813741466409323,6.7284003904947,0.107410557042488,0.928067519756987,5.97143833047924,0,0,0,5.04739592914604,0,0,1.82696004375648,0,0,0,0,0,0,0,0,0,0,1.38172136692479,0,0.138258436151731,0,0,0,1.63804924423206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,1.27201740261367,0,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,3.05105676373734,0,0,11.6576008941349,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,1.09651553371436,8.435590032618,0.527613733078862,0,0,0.672567444437648,0,0,2.30626162422861,0,0,0.203909198930495,0,0,0,31.7112095116077,0.314231179832004,0,12.7842220871329,0,0,1.35805433935647,0,0,0,0,0,0,0,0,0,0,10.1612892045823,0,0,0,0,0,0,19.4228651156368,17.042025938137,1.1598144313382,0.485710993059139,0,0,0,0,0,0,9.02937649862952,7.21246549663059,0,96.3432904492849,0,0.981542335574726,0.594092800654172,0.4226557275834,2.37897960562944,0.281951753939561,0.45120521581504,0,0,0,0,10.9550458236978,0,0.430018749454354,0,0.0679914901909147,0,8.99345628876181,0.743990036333503,0,0.432626562123789,0,0,0,0,0,0,0,6.28963195211387,0.267964130156178,0,0,3.41174371041569,1.66645102024618,0,0.124149428591716,0,0.827413057616144,1.0105859447911,3.26575121845442,10.6092323336437,0.202056159043763,2.00822175099494,2.99394320891412,0,0,0,0,9.38563769613817,26.1596690551334,9.35861210126198,10.6521083869682,2.21401172950129,0 | |phase1_expression=0.363356758541113,2.99740733447376,0.281908808191942,0,0.446961094427288,0,10.1319951267324,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.572471974262113,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0,0.50133791063589,0,0,0,0,0,0,2.42311289670768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.506522046658319,0,0.286836620748814,0,1.12135520028461,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0.612975591598039,0.45071417671979,0.567160915800105,0,0.213557388818567,0,0,0,0.257640540045629,0,0,0.194874010322397,0,0.460249493211497,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.23921608243556,0,0,0,0,0,0,0,4.43231780340257,0,0.823240336780769,0,3.19852753868291,0,0,0,0.299918973546171,0,0,0,1.67737398844108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,7.48695101510906,0.892144943985809,0.473107245101804,1.87426263988341,1.20378439891088,2.27407504055985,0,0,0.553107505625109,0,0,0,0,0,0,0,0,0,0.248107807818777,6.59886485138669,2.24528075546459,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,1.64865618636356,0,0,0,0,4.82051789532479,0,0.154048617114644,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,2.53103539774981,2.2875623270859,0,0,0,0,1.61885211824983,0.54907405947211,0.353437207037059,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0,0,1.62328301570163,0.6196469961995,0,2.15117028306077,3.53696547647236,2.85336841185,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05111450980652,0,0,0,0,0,0,0,0,0,0,0,4.98119970627674,16.3007510163377,0,0,0,0.311039587661807,0,0,0,90.9492199972528,0,0,0,0.278304294485554,0,0,0,2.17499872630438,0,0,0,0,0,0.347249989866585,0,0.241192877250816,1.52581736317083,1.21637185924347,0.886642856860642,0.658156191461918,0,0,18.2372112653999,0,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,14.6839557075543,17.7198742030751,0,0,0,0.202203398942031,7.2231988256891,0,0,0,0,8.2862724598372,7.25944296291983,0,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,11.357233435732,0,0,0,0,17.6520010008923,0,2.25980740780532,0,0,0.126621591911757,0,0,6.19013684744122,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0.429765441419957,0,30.4417817386757,53.1652183707106,10.7680953686522,1.59743200399193,7.2968428183217,33.6988900737228,71.6175816708502,6.12509802022086,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.945668487590378,0,0,0,0,27.8731177285613,20.5248510813284,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,1.06787412567695,3.45849471219265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0.155262956876259,0,0.265841714557995,1.5652351854352,2.70463696194993,0.380805212168795,0.813741466409323,6.7284003904947,0.107410557042488,0.928067519756987,5.97143833047924,0,0,0,5.04739592914604,0,0,1.82696004375648,0,0,0,0,0,0,0,0,0,0,1.38172136692479,0,0.138258436151731,0,0,0,1.63804924423206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,1.27201740261367,0,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,3.05105676373734,0,0,11.6576008941349,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,1.09651553371436,8.435590032618,0.527613733078862,0,0,0.672567444437648,0,0,2.30626162422861,0,0,0.203909198930495,0,0,0,31.7112095116077,0.314231179832004,0,12.7842220871329,0,0,1.35805433935647,0,0,0,0,0,0,0,0,0,0,10.1612892045823,0,0,0,0,0,0,19.4228651156368,17.042025938137,1.1598144313382,0.485710993059139,0,0,0,0,0,0,9.02937649862952,7.21246549663059,0,96.3432904492849,0,0.981542335574726,0.594092800654172,0.4226557275834,2.37897960562944,0.281951753939561,0.45120521581504,0,0,0,0,10.9550458236978,0,0.430018749454354,0,0.0679914901909147,0,8.99345628876181,0.743990036333503,0,0.432626562123789,0,0,0,0,0,0,0,6.28963195211387,0.267964130156178,0,0,3.41174371041569,1.66645102024618,0,0.124149428591716,0,0.827413057616144,1.0105859447911,3.26575121845442,10.6092323336437,0.202056159043763,2.00822175099494,2.99394320891412,0,0,0,0,9.38563769613817,26.1596690551334,9.35861210126198,10.6521083869682,2.21401172950129,0 | ||
|short_description=p3@SLMAP | |short_description=p3@SLMAP | ||
}} | }} |
Latest revision as of 04:48, 19 September 2015
Short description: | p3@SLMAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLMAP_5end |
Coexpression cluster: | C4339_smooth_bladder_heart_prostate_uterus_left_colon |
Association with transcript: | 0bp_to_ENST00000442599, ENST00000459654, ENST00000472546, uc011bez.1, uc011bfa.1_5end |
EntrezGene: | SLMAP |
HGNC: | 16643 |
UniProt: | C9JPE6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.14e-22 | 114 |
duct of male reproductive system | 1.40e-09 | 4 |
intestine | 1.29e-08 | 17 |
valve | 3.49e-08 | 3 |
cardiac mesenchyme | 3.49e-08 | 3 |
cardial valve | 3.49e-08 | 3 |
tunica intima | 3.49e-08 | 3 |
heart layer | 3.49e-08 | 3 |
endocardium | 3.49e-08 | 3 |
endocardial cushion | 3.49e-08 | 3 |
presumptive endocardium | 3.49e-08 | 3 |
cardiac chamber | 4.10e-08 | 3 |
primary circulatory organ | 7.94e-08 | 27 |
male genital duct | 9.48e-08 | 3 |
internal male genitalia | 9.48e-08 | 3 |
male reproductive organ | 6.39e-07 | 11 |
large intestine | 6.83e-07 | 11 |
gastrointestinal system | 9.21e-07 | 25 |